RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 MDH2P40926 338 aaKnown RBP12.84□□□□□ -0.35
PDLIM5-202ENST00000318007 EDDM3BP56851 147 aa12.84□□□□□ -0.35
PDLIM5-202ENST00000318007 DYNC1I2Q13409 638 aaKnown RBP12.84□□□□□ -0.35
PDLIM5-202ENST00000318007 ARFRP1Q13795 201 aa12.84□□□□□ -0.35
PDLIM5-202ENST00000318007 IL13RA2Q14627 380 aa12.84□□□□□ -0.35
PDLIM5-202ENST00000318007 GRK1Q15835 563 aa12.84□□□□□ -0.35
PDLIM5-202ENST00000318007 MPV17LQ2QL34 196 aa12.84□□□□□ -0.35
PDLIM5-202ENST00000318007 C17orf107Q6ZR85 190 aa12.84□□□□□ -0.35
PDLIM5-202ENST00000318007 C5orf24Q7Z6I8 188 aa12.84□□□□□ -0.35
PDLIM5-202ENST00000318007 OR4S1Q8NGB4 309 aa12.84□□□□□ -0.35
PDLIM5-202ENST00000318007 SETD6Q8TBK2 473 aa12.84□□□□□ -0.35
PDLIM5-202ENST00000318007 AK3Q9UIJ7 227 aa12.84□□□□□ -0.35
PDLIM5-202ENST00000318007 ZNF222Q9UK12 451 aa12.84□□□□□ -0.35
PDLIM5-202ENST00000318007 PCDHB10Q9UN67 800 aa12.84□□□□□ -0.35
PDLIM5-202ENST00000318007 SETXQ7Z333 2677 aaKnown RBP12.83□□□□□ -0.35
PDLIM5-202ENST00000318007 FOXI3A8MTJ6 420 aaPredicted RBP12.83□□□□□ -0.35
PDLIM5-202ENST00000318007 MCRIP1C9JLW8 97 aa12.83□□□□□ -0.35
PDLIM5-202ENST00000318007 CHRM2P08172 466 aa12.83□□□□□ -0.35
PDLIM5-202ENST00000318007 RPS2P15880 293 aaKnown RBP12.83□□□□□ -0.35
PDLIM5-202ENST00000318007 NDUFB7P17568 137 aa12.83□□□□□ -0.35
PDLIM5-202ENST00000318007 PDLIM4P50479 330 aa12.83□□□□□ -0.35
PDLIM5-202ENST00000318007 LSAMPQ13449 338 aa12.83□□□□□ -0.35
PDLIM5-202ENST00000318007 NHLRC3Q5JS37 347 aa12.83□□□□□ -0.35
PDLIM5-202ENST00000318007 MAPK1IP1LQ8NDC0 245 aa12.83□□□□□ -0.35
PDLIM5-202ENST00000318007 OR4K15Q8NH41 348 aa12.83□□□□□ -0.35
PDLIM5-202ENST00000318007 UBALD1Q8TB05 177 aa12.83□□□□□ -0.35
PDLIM5-202ENST00000318007 PLPPR1Q8TBJ4 325 aa12.83□□□□□ -0.35
PDLIM5-202ENST00000318007 CCDC107Q8WV48 283 aa12.83□□□□□ -0.35
PDLIM5-202ENST00000318007 ST8SIA4Q92187 359 aa12.83□□□□□ -0.35
PDLIM5-202ENST00000318007 GSX2Q9BZM3 304 aa12.83□□□□□ -0.35
PDLIM5-202ENST00000318007 AKIP1Q9NQ31 210 aa12.83□□□□□ -0.35
PDLIM5-202ENST00000318007 FCN3O75636 299 aa12.83□□□□□ -0.36
PDLIM5-202ENST00000318007 RANBP1P43487 201 aa12.83□□□□□ -0.36
PDLIM5-202ENST00000318007 TMEM33P57088 247 aa12.83□□□□□ -0.36
PDLIM5-202ENST00000318007 MRPS11P82912 194 aaKnown RBP12.83□□□□□ -0.36
PDLIM5-202ENST00000318007 DGCR2P98153 550 aa12.83□□□□□ -0.36
PDLIM5-202ENST00000318007 CLEC12BQ2HXU8 276 aa12.83□□□□□ -0.36
PDLIM5-202ENST00000318007 ZNF260Q3ZCT1 412 aa12.83□□□□□ -0.36
PDLIM5-202ENST00000318007 MFSD4AQ8N468 514 aa12.83□□□□□ -0.36
PDLIM5-202ENST00000318007 GVQW1Q8N7I0 195 aa12.83□□□□□ -0.36
PDLIM5-202ENST00000318007 H1FXQ92522 213 aaKnown RBP12.83□□□□□ -0.36
PDLIM5-202ENST00000318007 SHARPINQ9H0F6 387 aa12.83□□□□□ -0.36
PDLIM5-202ENST00000318007 ZNF665Q9H7R5 613 aa12.83□□□□□ -0.36
PDLIM5-202ENST00000318007 RHOFQ9HBH0 211 aa12.83□□□□□ -0.36
PDLIM5-202ENST00000318007 CHMP1AQ9HD42 196 aaPredicted RBP12.83□□□□□ -0.36
PDLIM5-202ENST00000318007 ETAA1Q9NY74 926 aa12.83□□□□□ -0.36
PDLIM5-202ENST00000318007 LINC00854A0A1B0GVQ3 168 aa12.82□□□□□ -0.36
PDLIM5-202ENST00000318007 NKX6-3A6NJ46 265 aa12.82□□□□□ -0.36
PDLIM5-202ENST00000318007 MFNGO00587 321 aa12.82□□□□□ -0.36
PDLIM5-202ENST00000318007 PHF1O43189 567 aaPredicted RBP12.82□□□□□ -0.36
PDLIM5-202ENST00000318007 CD3GP09693 182 aa12.82□□□□□ -0.36
PDLIM5-202ENST00000318007 OR3A1P47881 315 aa12.82□□□□□ -0.36
PDLIM5-202ENST00000318007 GNG2P59768 71 aa12.82□□□□□ -0.36
PDLIM5-202ENST00000318007 IL13RA1P78552 427 aa12.82□□□□□ -0.36
PDLIM5-202ENST00000318007 Q5PR19 223 aa12.82□□□□□ -0.36
PDLIM5-202ENST00000318007 PRR18Q8N4B5 295 aa12.82□□□□□ -0.36
PDLIM5-202ENST00000318007 CMTM3Q96MX0 182 aa12.82□□□□□ -0.36
PDLIM5-202ENST00000318007 PIMREGQ9BSJ6 248 aa12.82□□□□□ -0.36
PDLIM5-202ENST00000318007 LPAR2Q9HBW0 351 aa12.82□□□□□ -0.36
PDLIM5-202ENST00000318007 MYOZ1Q9NP98 299 aaPredicted RBP12.82□□□□□ -0.36
PDLIM5-202ENST00000318007 ITGB1BP2Q9UKP3 347 aa12.82□□□□□ -0.36
PDLIM5-202ENST00000318007 IFNL4K9M1U5 179 aa12.81□□□□□ -0.36
PDLIM5-202ENST00000318007 DVL1O14640 695 aa12.81□□□□□ -0.36
PDLIM5-202ENST00000318007 TK1P04183 234 aa12.81□□□□□ -0.36
PDLIM5-202ENST00000318007 MRPS15P82914 257 aaKnown RBP12.81□□□□□ -0.36
PDLIM5-202ENST00000318007 ZNF788Q6ZQV5 615 aa12.81□□□□□ -0.36
PDLIM5-202ENST00000318007 LINC00596Q86U02 117 aa12.81□□□□□ -0.36
PDLIM5-202ENST00000318007 CMSS1Q9BQ75 279 aaKnown RBP12.81□□□□□ -0.36
PDLIM5-202ENST00000318007 DCTN5Q9BTE1 182 aa12.81□□□□□ -0.36
PDLIM5-202ENST00000318007 BARX1Q9HBU1 254 aaPredicted RBP12.81□□□□□ -0.36
PDLIM5-202ENST00000318007 RCC2Q9P258 522 aaKnown RBP12.81□□□□□ -0.36
PDLIM5-202ENST00000318007 SLC25A10Q9UBX3 287 aaPredicted RBP12.81□□□□□ -0.36
PDLIM5-202ENST00000318007 KLK11Q9UBX7 282 aa12.81□□□□□ -0.36
PDLIM5-202ENST00000318007 ZANQ9Y493 2812 aa12.81□□□□□ -0.36
PDLIM5-202ENST00000318007 ZNF737O75373 536 aa12.81□□□□□ -0.36
PDLIM5-202ENST00000318007 IL2RGP31785 369 aa12.81□□□□□ -0.36
PDLIM5-202ENST00000318007 GLIPR1P48060 266 aa12.81□□□□□ -0.36
PDLIM5-202ENST00000318007 FAM189A2Q15884 450 aa12.81□□□□□ -0.36
PDLIM5-202ENST00000318007 HACD4Q5VWC8 232 aa12.81□□□□□ -0.36
PDLIM5-202ENST00000318007 SLC36A1Q7Z2H8 476 aa12.81□□□□□ -0.36
PDLIM5-202ENST00000318007 TRAPPC6BQ86SZ2 158 aa12.81□□□□□ -0.36
PDLIM5-202ENST00000318007 OR8H2Q8N162 312 aa12.81□□□□□ -0.36
PDLIM5-202ENST00000318007 Q8N402 240 aa12.81□□□□□ -0.36
PDLIM5-202ENST00000318007 ZNF561Q8N587 486 aa12.81□□□□□ -0.36
PDLIM5-202ENST00000318007 OR52I2Q8NH67 350 aa12.81□□□□□ -0.36
PDLIM5-202ENST00000318007 C10orf105Q8TEF2 133 aa12.81□□□□□ -0.36
PDLIM5-202ENST00000318007 ST6GALNAC5Q9BVH7 336 aa12.81□□□□□ -0.36
PDLIM5-202ENST00000318007 ZFHX3Q15911 3703 aa12.81□□□□□ -0.36
PDLIM5-202ENST00000318007 MED13LQ71F56 2210 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 SIGLEC5O15389 551 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 LANCL1O43813 399 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 SCGNO76038 276 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 KRBOX4Q5JUW0 171 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 Q6ZPA2 131 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 GDPD3Q7L5L3 318 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 EDARQ9UNE0 448 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 KIAA2026Q5HYC2 2103 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 MEIKINA0A087WXM9 373 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 IGHV4-61A0A0C4DH41 118 aa12.8□□□□□ -0.36
PDLIM5-202ENST00000318007 FAM90A10PA6NDY2 464 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms