RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 COMPP49747 757 aaPredicted RBP6.6□□□□□ -1.35
CNOT4-201ENST00000315544 PRDX4Q13162 271 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 HMGN3Q15651 99 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 ODF4Q2M2E3 257 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 PIGYQ3MUY2 71 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 ARMC6Q6NXE6 501 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 OR8S1Q8NH09 359 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 CCDC107Q8WV48 283 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 FAM46BQ96A09 425 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 OR51I2Q9H344 312 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 GSN-AS1Q9NRJ2 163 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 SLC13A4Q9UKG4 626 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 CFAP46Q8IYW2 2715 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 DUXBA0A1W2PPF3 345 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 RAC3P60763 192 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 SPNS3Q6ZMD2 512 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 RD3Q7Z3Z2 195 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 LYZL2Q7Z4W2 148 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 OR13C9Q8NGT0 318 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 OR11L1Q8NGX0 322 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 BANF2Q9H503 90 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 FAM212BQ9NTI7 297 aaPredicted RBP6.6□□□□□ -1.35
CNOT4-201ENST00000315544 NKIRAS2Q9NYR9 191 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 TMA7Q9Y2S6 64 aaKnown RBP6.6□□□□□ -1.35
CNOT4-201ENST00000315544 NOSIPQ9Y314 301 aaKnown RBP6.6□□□□□ -1.35
CNOT4-201ENST00000315544 UNC13CQ8NB66 2214 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 PRSS44E7EML9 344 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 MTRF1O75570 445 aaKnown RBP6.6□□□□□ -1.35
CNOT4-201ENST00000315544 MSR1P21757 451 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 PDCD1Q15116 288 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 WDR25Q64LD2 544 aaPredicted RBP6.6□□□□□ -1.35
CNOT4-201ENST00000315544 ZNF497Q6ZNH5 498 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 TCF23Q7RTU1 214 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 COMMD1Q8N668 190 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 MRPL37Q9BZE1 423 aaKnown RBP6.6□□□□□ -1.35
CNOT4-201ENST00000315544 OR10A2Q9H208 303 aa6.6□□□□□ -1.35
CNOT4-201ENST00000315544 TRDCB7Z8K6 153 aa6.59□□□□□ -1.35
CNOT4-201ENST00000315544 CYB5AP00167 134 aa6.59□□□□□ -1.35
CNOT4-201ENST00000315544 PPM1FP49593 454 aaPredicted RBP6.59□□□□□ -1.35
CNOT4-201ENST00000315544 IL13RA2Q14627 380 aa6.59□□□□□ -1.35
CNOT4-201ENST00000315544 ZNF146Q15072 292 aa6.59□□□□□ -1.35
CNOT4-201ENST00000315544 GPR157Q5UAW9 335 aa6.59□□□□□ -1.35
CNOT4-201ENST00000315544 UNQ6126/PRO20091Q6UXV3 157 aa6.59□□□□□ -1.35
CNOT4-201ENST00000315544 OR5D13Q8NGL4 314 aa6.59□□□□□ -1.35
CNOT4-201ENST00000315544 RNASEH2CQ8TDP1 164 aaKnown RBP6.59□□□□□ -1.35
CNOT4-201ENST00000315544 SFT2D1Q8WV19 159 aa6.59□□□□□ -1.35
CNOT4-201ENST00000315544 OR5P3Q8WZ94 311 aa6.59□□□□□ -1.35
CNOT4-201ENST00000315544 PAPOLGQ9BWT3 736 aaKnown RBP6.59□□□□□ -1.35
CNOT4-201ENST00000315544 ZFP57Q9NU63 452 aa6.59□□□□□ -1.35
CNOT4-201ENST00000315544 GEMIN2O14893 280 aaKnown RBP6.59□□□□□ -1.35
CNOT4-201ENST00000315544 HOXB5P09067 269 aa6.59□□□□□ -1.35
CNOT4-201ENST00000315544 CCL4P13236 92 aa6.59□□□□□ -1.35
CNOT4-201ENST00000315544 HOXA5P20719 270 aa6.59□□□□□ -1.35
CNOT4-201ENST00000315544 COL8A2P25067 703 aa6.59□□□□□ -1.35
CNOT4-201ENST00000315544 RRADP55042 308 aa6.59□□□□□ -1.35
CNOT4-201ENST00000315544 SNU13P55769 128 aaKnown RBP6.59□□□□□ -1.35
CNOT4-201ENST00000315544 MSMPQ1L6U9 139 aa6.59□□□□□ -1.35
CNOT4-201ENST00000315544 UTF1Q5T230 341 aa6.59□□□□□ -1.35
CNOT4-201ENST00000315544 TMEM14EPQ6UXP3 125 aa6.59□□□□□ -1.35
CNOT4-201ENST00000315544 TMED6Q8WW62 240 aa6.59□□□□□ -1.35
CNOT4-201ENST00000315544 CMKLR1Q99788 373 aa6.59□□□□□ -1.35
CNOT4-201ENST00000315544 GVINP1Q7Z2Y8 2422 aa6.59□□□□□ -1.35
CNOT4-201ENST00000315544 C15orf65H3BRN8 121 aa6.59□□□□□ -1.36
CNOT4-201ENST00000315544 CLN5O75503 358 aa6.59□□□□□ -1.36
CNOT4-201ENST00000315544 CGAP01215 116 aa6.59□□□□□ -1.36
CNOT4-201ENST00000315544 PFN1P07737 140 aaKnown RBP6.59□□□□□ -1.36
CNOT4-201ENST00000315544 NARS2Q96I59 477 aaKnown RBP6.59□□□□□ -1.36
CNOT4-201ENST00000315544 HPF1Q9NWY4 346 aa6.59□□□□□ -1.36
CNOT4-201ENST00000315544 MED12Q93074 2177 aa6.59□□□□□ -1.36
CNOT4-201ENST00000315544 MED13Q9UHV7 2174 aa6.59□□□□□ -1.36
CNOT4-201ENST00000315544 SDK1Q7Z5N4 2213 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 FXYD6-FXYD2A0A087WZ82 144 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 LINC00587B1AMM8 73 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 DISC1C4P0D8 188 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 TNFSF11O14788 317 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 PPP1CCP36873 323 aaKnown RBP6.58□□□□□ -1.36
CNOT4-201ENST00000315544 EMP2P54851 167 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 RAB11FIP2Q7L804 512 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 SLC35G3Q8N808 338 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 OR2Y1Q8NGV0 311 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 TMEM234Q8WY98 164 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 CMSS1Q9BQ75 279 aaKnown RBP6.58□□□□□ -1.36
CNOT4-201ENST00000315544 TMEM59Q9BXS4 323 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 GPR35Q9HC97 309 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 TRBV11-1A0A0K0K1C0 115 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 A0A1W2PR80 420 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 F8W036 122 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 STMND1H3BQB6 276 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 TSPAN4O14817 238 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 SYT7O43581 403 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 FGF12P61328 243 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 NHLH2Q02577 135 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 NKAPLQ5M9Q1 402 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 CT55Q8WUE5 264 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 FAAP24Q9BTP7 215 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 EIF1AYO14602 144 aaKnown RBP6.58□□□□□ -1.36
CNOT4-201ENST00000315544 DHHO43323 396 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 OR5AC1P0C628 307 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 ESDP10768 282 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 EIF1AXP47813 144 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms