RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 TRAPPC6AO75865 159 aa14.31□□□□□ -0.12
SSH3-201ENST00000308127 CXCL1P09341 107 aa14.31□□□□□ -0.12
SSH3-201ENST00000308127 CCL4P13236 92 aa14.31□□□□□ -0.12
SSH3-201ENST00000308127 LIFP15018 202 aa14.31□□□□□ -0.12
SSH3-201ENST00000308127 GNRHRP30968 328 aa14.31□□□□□ -0.12
SSH3-201ENST00000308127 NKX2-1P43699 371 aaPredicted RBP14.31□□□□□ -0.12
SSH3-201ENST00000308127 DYNLT3P51808 116 aa14.31□□□□□ -0.12
SSH3-201ENST00000308127 ZNF611Q8N823 705 aa14.31□□□□□ -0.12
SSH3-201ENST00000308127 CYB561D1Q8N8Q1 229 aa14.31□□□□□ -0.12
SSH3-201ENST00000308127 RAB39BQ96DA2 213 aa14.31□□□□□ -0.12
SSH3-201ENST00000308127 GALNT14Q96FL9 552 aa14.31□□□□□ -0.12
SSH3-201ENST00000308127 OR51B6Q9H340 312 aa14.31□□□□□ -0.12
SSH3-201ENST00000308127 DECR2Q9NUI1 292 aa14.31□□□□□ -0.12
SSH3-201ENST00000308127 CACNA1DQ01668 2161 aa14.31□□□□□ -0.12
SSH3-201ENST00000308127 TRAV39A0A0B4J263 110 aa14.31□□□□□ -0.12
SSH3-201ENST00000308127 IGHV2-5P01817 119 aa14.31□□□□□ -0.12
SSH3-201ENST00000308127 RFPL3SP0C7P2 107 aa14.31□□□□□ -0.12
SSH3-201ENST00000308127 TAGLN2P37802 199 aaKnown RBP14.31□□□□□ -0.12
SSH3-201ENST00000308127 RPS18P62269 152 aaKnown RBP14.31□□□□□ -0.12
SSH3-201ENST00000308127 MALLQ13021 153 aa14.31□□□□□ -0.12
SSH3-201ENST00000308127 DAZAP2Q15038 168 aaPredicted RBP14.31□□□□□ -0.12
SSH3-201ENST00000308127 ZNF674Q2M3X9 581 aa14.31□□□□□ -0.12
SSH3-201ENST00000308127 GFI1BQ5VTD9 330 aa14.31□□□□□ -0.12
SSH3-201ENST00000308127 ZNF818PQ6ZRF7 136 aa14.31□□□□□ -0.12
SSH3-201ENST00000308127 ZNF695Q8IW36 515 aa14.31□□□□□ -0.12
SSH3-201ENST00000308127 GAPTQ8N292 157 aa14.31□□□□□ -0.12
SSH3-201ENST00000308127 SUCNR1Q9BXA5 334 aa14.31□□□□□ -0.12
SSH3-201ENST00000308127 HSF4Q9ULV5 492 aa14.31□□□□□ -0.12
SSH3-201ENST00000308127 H3BQ15 152 aa14.3□□□□□ -0.12
SSH3-201ENST00000308127 MPPED1O15442 326 aa14.3□□□□□ -0.12
SSH3-201ENST00000308127 NDUFS6O75380 124 aaKnown RBP14.3□□□□□ -0.12
SSH3-201ENST00000308127 S100A8P05109 93 aa14.3□□□□□ -0.12
SSH3-201ENST00000308127 S100A12P80511 92 aa14.3□□□□□ -0.12
SSH3-201ENST00000308127 ARL6IP1Q15041 203 aa14.3□□□□□ -0.12
SSH3-201ENST00000308127 MOB3AQ96BX8 217 aa14.3□□□□□ -0.12
SSH3-201ENST00000308127 ZNF845Q96IR2 970 aaPredicted RBP14.3□□□□□ -0.12
SSH3-201ENST00000308127 BCO1Q9HAY6 547 aa14.3□□□□□ -0.12
SSH3-201ENST00000308127 SEBOXQ9HB31 216 aaPredicted RBP14.3□□□□□ -0.12
SSH3-201ENST00000308127 KNTC1P50748 2209 aa14.3□□□□□ -0.12
SSH3-201ENST00000308127 TGIF2-C20orf24A0A0A6YYL0 155 aa14.3□□□□□ -0.12
SSH3-201ENST00000308127 PROB1E7EW31 1015 aa14.3□□□□□ -0.12
SSH3-201ENST00000308127 AP4M1O00189 453 aa14.3□□□□□ -0.12
SSH3-201ENST00000308127 TERTO14746 1132 aaKnown RBP14.3□□□□□ -0.12
SSH3-201ENST00000308127 LY86O95711 162 aa14.3□□□□□ -0.12
SSH3-201ENST00000308127 TCN2P20062 427 aa14.3□□□□□ -0.12
SSH3-201ENST00000308127 CNN3Q15417 329 aaKnown RBP14.3□□□□□ -0.12
SSH3-201ENST00000308127 FAM27BQ5VT28 67 aa14.3□□□□□ -0.12
SSH3-201ENST00000308127 OR4D5Q8NGN0 318 aa14.3□□□□□ -0.12
SSH3-201ENST00000308127 OR14L1PQ8NHC6 308 aa14.3□□□□□ -0.12
SSH3-201ENST00000308127 ABHD3Q8WU67 409 aa14.3□□□□□ -0.12
SSH3-201ENST00000308127 SPSB1Q96BD6 273 aa14.3□□□□□ -0.12
SSH3-201ENST00000308127 ZNF488Q96MN9 340 aa14.3□□□□□ -0.12
SSH3-201ENST00000308127 SYT3Q9BQG1 590 aa14.3□□□□□ -0.12
SSH3-201ENST00000308127 PBDC1Q9BVG4 233 aa14.3□□□□□ -0.12
SSH3-201ENST00000308127 METTL1Q9UBP6 276 aaKnown RBP14.3□□□□□ -0.12
SSH3-201ENST00000308127 C19orf25Q9UFG5 118 aaPredicted RBP14.3□□□□□ -0.12
SSH3-201ENST00000308127 IGHV3-64DA0A0J9YX35 117 aa14.29□□□□□ -0.12
SSH3-201ENST00000308127 RBFOX3A6NFN3 312 aa14.29□□□□□ -0.12
SSH3-201ENST00000308127 ECI1P42126 302 aa14.29□□□□□ -0.12
SSH3-201ENST00000308127 SUCLG1P53597 346 aaKnown RBP14.29□□□□□ -0.12
SSH3-201ENST00000308127 HIST1H3AP68431 136 aa14.29□□□□□ -0.12
SSH3-201ENST00000308127 HMGN3Q15651 99 aa14.29□□□□□ -0.12
SSH3-201ENST00000308127 RNF212Q495C1 297 aa14.29□□□□□ -0.12
SSH3-201ENST00000308127 C4orf17Q53FE4 359 aa14.29□□□□□ -0.12
SSH3-201ENST00000308127 HIST2H3PS2Q5TEC6 136 aa14.29□□□□□ -0.12
SSH3-201ENST00000308127 SPSB3Q6PJ21 355 aa14.29□□□□□ -0.12
SSH3-201ENST00000308127 HIST2H3AQ71DI3 136 aa14.29□□□□□ -0.12
SSH3-201ENST00000308127 PDCD6O75340 191 aa14.29□□□□□ -0.12
SSH3-201ENST00000308127 HLA-HP01893 362 aa14.29□□□□□ -0.12
SSH3-201ENST00000308127 UMODP07911 640 aa14.29□□□□□ -0.12
SSH3-201ENST00000308127 BCL3P20749 454 aa14.29□□□□□ -0.12
SSH3-201ENST00000308127 UBE2KP61086 200 aa14.29□□□□□ -0.12
SSH3-201ENST00000308127 GPR157Q5UAW9 335 aa14.29□□□□□ -0.12
SSH3-201ENST00000308127 CARFQ8N187 725 aa14.29□□□□□ -0.12
SSH3-201ENST00000308127 CCL28Q9NRJ3 127 aa14.29□□□□□ -0.12
SSH3-201ENST00000308127 LY6G6EA0A0G2JKS1 128 aa14.28□□□□□ -0.12
SSH3-201ENST00000308127 IFITM10A6NMD0 228 aa14.28□□□□□ -0.12
SSH3-201ENST00000308127 EDN3P14138 238 aa14.28□□□□□ -0.12
SSH3-201ENST00000308127 DTYMKP23919 212 aa14.28□□□□□ -0.12
SSH3-201ENST00000308127 EIF2S3P41091 472 aaKnown RBP14.28□□□□□ -0.12
SSH3-201ENST00000308127 VAMP2P63027 116 aa14.28□□□□□ -0.12
SSH3-201ENST00000308127 IL13RA2Q14627 380 aa14.28□□□□□ -0.12
SSH3-201ENST00000308127 RAB35Q15286 201 aa14.28□□□□□ -0.12
SSH3-201ENST00000308127 WIPI1Q5MNZ9 446 aaPredicted RBP14.28□□□□□ -0.12
SSH3-201ENST00000308127 SPNS3Q6ZMD2 512 aa14.28□□□□□ -0.12
SSH3-201ENST00000308127 AAED1Q7RTV5 226 aa14.28□□□□□ -0.12
SSH3-201ENST00000308127 TMEM252Q8N6L7 170 aa14.28□□□□□ -0.12
SSH3-201ENST00000308127 Q8WTZ3 238 aa14.28□□□□□ -0.12
SSH3-201ENST00000308127 EXTL1Q92935 676 aa14.28□□□□□ -0.12
SSH3-201ENST00000308127 TAAR9Q96RI9 348 aa14.28□□□□□ -0.12
SSH3-201ENST00000308127 U3KQA8 63 aa14.28□□□□□ -0.12
SSH3-201ENST00000308127 NCKAP5O14513 1909 aa14.28□□□□□ -0.12
SSH3-201ENST00000308127 GPR179Q6PRD1 2367 aa14.28□□□□□ -0.12
SSH3-201ENST00000308127 ERVFRD-1P60508 538 aa14.28□□□□□ -0.12
SSH3-201ENST00000308127 MRPS34P82930 218 aaKnown RBP14.28□□□□□ -0.12
SSH3-201ENST00000308127 SRYQ05066 204 aa14.28□□□□□ -0.12
SSH3-201ENST00000308127 TMEM267Q0VDI3 215 aaPredicted RBP14.28□□□□□ -0.12
SSH3-201ENST00000308127 RTL6Q6ICC9 239 aa14.28□□□□□ -0.12
SSH3-201ENST00000308127 ODF3L1Q8IXM7 274 aa14.28□□□□□ -0.12
SSH3-201ENST00000308127 GPR137CQ8N3F9 429 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms