RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 AKIRIN1Q9H9L7 192 aaPredicted RBP9.35□□□□□ -0.91
SYNPO2-201ENST00000307142 J3QT63 122 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 MBP02144 154 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 GZMHP20718 246 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 LY6EQ16553 131 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 ZNF260Q3ZCT1 412 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 RPL7L1Q6DKI1 246 aaKnown RBP9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 LYG2Q86SG7 212 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 TERB2Q8NHR7 220 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 SLC25A22Q9H936 323 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 PLSCR3Q9NRY6 295 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 FRRS1LQ9P0K9 344 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 CCL27Q9Y4X3 112 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 RLFQ13129 1914 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 TFAP2AP05549 437 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 ZP4Q12836 540 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 LCN15Q6UWW0 184 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 WFDC3Q8IUB2 231 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 ZNF596Q8TC21 504 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 FFAR1O14842 300 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 H2AFB1P0C5Y9 115 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 FAM106CPP0CH98 169 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 SLC16A12Q6ZSM3 486 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 OR1B1Q8NGR6 318 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 OR10AC1Q8NH08 325 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 PARP11Q9NR21 331 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 MIOXQ9UGB7 285 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 STARD10Q9Y365 291 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 FLYWCH2Q96CP2 140 aaKnown RBP9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 OR1A1Q9P1Q5 309 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 CACNA1IQ9P0X4 2223 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 C3orf85A0A1B0GTC6 90 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 CBR1P16152 277 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 MMDQ15546 238 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 KCNMB1Q16558 191 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 PRR27Q6MZM9 219 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 BLNKQ8WV28 456 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 PIPOXQ9P0Z9 390 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 LSM2Q9Y333 95 aaKnown RBP9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 PCDHGA9Q9Y5G4 932 aaKnown RBP9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 EVX1P49640 407 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 SSBP1Q04837 148 aaKnown RBP9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 FAM27E3Q08E93 113 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 VSTM2AQ8TAG5 236 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 NUDT16L1Q9BRJ7 211 aaKnown RBP9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 KCNK15Q9H427 330 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 DOK5Q9P104 306 aa9.34□□□□□ -0.91
SYNPO2-201ENST00000307142 LOC105371242A0A075B767 164 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 ZNF724A8MTY0 619 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 CELA3AP09093 270 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 TIGITQ495A1 244 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 DCAF12L2Q5VW00 463 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 LRRTM1Q86UE6 522 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 KCNRGQ8N5I3 272 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 YAE1D1Q9NRH1 226 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 A0A1W2PPE3 182 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 NKX2-6A6NCS4 301 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 C1orf196B1AJZ1 125 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 COX5AP20674 150 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 APOBEC3AP31941 199 aaPredicted RBP9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 TNFSF10P50591 281 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 PAFAH1B2P68402 229 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 C2orf50Q96LR7 162 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 IFNL4K9M1U5 179 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 GNG7O60262 68 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 PGA4P0DJD7 388 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 PGA3P0DJD8 388 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 RPL12P30050 165 aaKnown RBP9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 SLC26A10Q8NG04 563 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 ZNF488Q96MN9 340 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 DCTN5Q9BTE1 182 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 DUSP21Q9H596 190 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 C4orf51C9J302 202 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 RFPL3SP0C7P2 107 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 PF4V1P10720 104 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 ORM2P19652 201 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 FNDC7Q5VTL7 733 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 OR5M8Q8NGP6 311 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 ZNF486Q96H40 463 aaPredicted RBP9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 GPR137Q96N19 417 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 DOCK4Q8N1I0 1966 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 ZNF705FA8MVS1 300 aaPredicted RBP9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 ZNF705DP0CH99 300 aaPredicted RBP9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 ZNF705BP0CI00 300 aaPredicted RBP9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 FAM27BQ5VT28 67 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 GNPNAT1Q96EK6 184 aaPredicted RBP9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 HARBI1Q96MB7 349 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 TMEM231Q9H6L2 316 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 TANC1Q9C0D5 1861 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 IGHV1-69-2A0A0G2JMI3 117 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 SOX15O60248 233 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 DUS4LO95620 317 aaKnown RBP9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 OR13C7P0DN81 318 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 DAOP14920 347 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 HMGA2P52926 109 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 PDZK1IP1Q13113 114 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 HAGHQ16775 308 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 TMUB2Q71RG4 321 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 OR5H6Q8NGV6 325 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms