RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 PTTG1IPP53801 180 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 TLE3Q04726 772 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 SRYQ05066 204 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 HERPUD1Q15011 391 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 MCEMP1Q8IX19 187 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 OR8B4Q96RC9 309 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 NPIPA1Q9UND3 350 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 TRBV6-7A0A0A0MS04 114 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 C20orf202A1L168 122 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 ST8SIA3O43173 380 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 NGFRP08138 427 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 ZNF93P35789 620 aaPredicted RBP9.54□□□□□ -0.88
LSM3-201ENST00000306024 SP6Q3SY56 376 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 GLIPR1L1Q6UWM5 242 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 YRDCQ86U90 279 aaKnown RBP9.54□□□□□ -0.88
LSM3-201ENST00000306024 BEND2Q8NDZ0 799 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 OR10A7Q8NGE5 316 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 OR5D14Q8NGL3 314 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 OR1P1Q8NH06 330 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 ERGIC1Q969X5 290 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 IMMP1LQ96LU5 166 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 CCNL2Q96S94 520 aaPredicted RBP9.54□□□□□ -0.88
LSM3-201ENST00000306024 SH3BGRL3Q9H299 93 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 OR52A1Q9UKL2 312 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 MRPS28Q9Y2Q9 187 aaKnown RBP9.54□□□□□ -0.88
LSM3-201ENST00000306024 C17orf51A8MQB3 221 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 FAM166BA8MTA8 275 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 A8MVM7 634 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 H7BYZ3 331 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 AQP7O14520 342 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 GCGP01275 180 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 CCL3P10147 92 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 EFNA3P52797 238 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 ARSJQ5FYB0 599 aaPredicted RBP9.54□□□□□ -0.88
LSM3-201ENST00000306024 TOMM20LQ6UXN7 152 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 HOGA1Q86XE5 327 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 LINC00346Q8IVM7 164 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 PAQR4Q8N4S7 273 aaPredicted RBP9.54□□□□□ -0.88
LSM3-201ENST00000306024 SLC26A10Q8NG04 563 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 OTOSQ8NHW6 89 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 RPS4Y2Q8TD47 263 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 EXTL1Q92935 676 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 PATZ1Q9HBE1 687 aaKnown RBP9.54□□□□□ -0.88
LSM3-201ENST00000306024 FKBP11Q9NYL4 201 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 IFNA5P01569 189 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 CHRM2P08172 466 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 ZNF708P17019 499 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 HSD11B1P28845 292 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 MLF1P58340 268 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 ERVFRD-1P60508 538 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 CDC20BQ86Y33 519 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 OR5D18Q8NGL1 313 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 CNTD2Q9H8S5 307 aa9.54□□□□□ -0.88
LSM3-201ENST00000306024 LOC102723996A0A087X1L8 192 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 FIGNL2A6NMB9 653 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 MBPP02686 304 aaPredicted RBP9.53□□□□□ -0.88
LSM3-201ENST00000306024 NPSP0C0P6 89 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 ACAA2P42765 397 aaKnown RBP9.53□□□□□ -0.88
LSM3-201ENST00000306024 RPL18Q07020 188 aaKnown RBP9.53□□□□□ -0.88
LSM3-201ENST00000306024 FOXF1Q12946 379 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 OR1C1Q15619 314 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 C1orf140Q5VVS0 124 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 SPINK14Q6IE38 97 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 SLC16A14Q7RTX9 510 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 TMEM183AQ8IXX5 376 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 ASB5Q8WWX0 329 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 ST8SIA1Q92185 356 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 MCHR2Q969V1 340 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 AMELYQ99218 206 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 SNHG12Q9BXW3 62 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 RIMS4Q9H426 269 aaPredicted RBP9.53□□□□□ -0.88
LSM3-201ENST00000306024 C5orf66Q9H5L9 145 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 NCOR2Q9Y618 2525 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 TRAV36DV7A0A075B6V5 113 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 A0A087WUJ7 227 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 A0A1W2PQD3 144 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 DHRS7CA6NNS2 312 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 CEBPZOSA8MTT3 80 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 MKRN2OSH3BPM6 223 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 MMP9P14780 707 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 RPS4Y1P22090 263 aaKnown RBP9.53□□□□□ -0.88
LSM3-201ENST00000306024 MPZP25189 248 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 SLC25A1P53007 311 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 ZNF260Q3ZCT1 412 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 SPIN3Q5JUX0 258 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 C11orf42Q8N5U0 333 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 FAM71F1Q96KD3 344 aaPredicted RBP9.53□□□□□ -0.88
LSM3-201ENST00000306024 WFIKKN1Q96NZ8 548 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 HIST1H2AAQ96QV6 131 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 SCNM1Q9BWG6 230 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 KLRC4-KLRK1H3BQV0 150 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 TLX3O43711 291 aaPredicted RBP9.53□□□□□ -0.88
LSM3-201ENST00000306024 CNOT4O95628 575 aaKnown RBP9.53□□□□□ -0.88
LSM3-201ENST00000306024 OR5H8P0DN80 308 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 ERVS71-1P61550 626 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 RND3P61587 244 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 PHLDA2Q53GA4 152 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 LINC01590Q5TEZ4 76 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 TMPRSS7Q7RTY8 843 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 TMEM178AQ8NBL3 297 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms