RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 OR10C1Q96KK4 312 aa11.32□□□□□ -0.6
COL3A1-201ENST00000304636 HES4Q9HCC6 221 aa11.32□□□□□ -0.6
COL3A1-201ENST00000304636 SH2D2AQ9NP31 389 aa11.32□□□□□ -0.6
COL3A1-201ENST00000304636 COL24A1Q17RW2 1714 aa11.32□□□□□ -0.6
COL3A1-201ENST00000304636 SRFP11831 508 aa11.32□□□□□ -0.6
COL3A1-201ENST00000304636 TMEM56Q96MV1 263 aa11.32□□□□□ -0.6
COL3A1-201ENST00000304636 NINQ8N4C6 2090 aa11.32□□□□□ -0.6
COL3A1-201ENST00000304636 RPS4Y1P22090 263 aaKnown RBP11.31□□□□□ -0.6
COL3A1-201ENST00000304636 SPCS3P61009 180 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 COL19A1Q14993 1142 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 LRP11Q86VZ4 500 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 LDLRAD3Q86YD5 345 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 PHF7Q9BWX1 381 aaPredicted RBP11.31□□□□□ -0.6
COL3A1-201ENST00000304636 OR51M1Q9H341 326 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 BARX1Q9HBU1 254 aaPredicted RBP11.31□□□□□ -0.6
COL3A1-201ENST00000304636 PSG11Q9UQ72 335 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 SDK1Q7Z5N4 2213 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 PDE6DO43924 150 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 ACAA1P09110 424 aaPredicted RBP11.31□□□□□ -0.6
COL3A1-201ENST00000304636 ZNF25P17030 456 aaPredicted RBP11.31□□□□□ -0.6
COL3A1-201ENST00000304636 CCL7P80098 99 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 OR5AU1Q8NGC0 362 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 GNB4Q9HAV0 340 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 OR5AC2Q9NZP5 309 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 MPC1Q9Y5U8 109 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 ADAMTSL1Q8N6G6 1762 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 A0A1B0GU03 582 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 HRKO00198 91 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 KCNAB3O43448 404 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 RNPS1Q15287 305 aaKnown RBP11.31□□□□□ -0.6
COL3A1-201ENST00000304636 HLA-DRB5Q30154 266 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 ETFRF1Q6IPR1 90 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 PET117Q6UWS5 81 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 ADAMTS17Q8TE56 1095 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 GSX1Q9H4S2 264 aaPredicted RBP11.31□□□□□ -0.6
COL3A1-201ENST00000304636 RCC2Q9P258 522 aaKnown RBP11.31□□□□□ -0.6
COL3A1-201ENST00000304636 CNTRLQ7Z7A1 2325 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 CRYM-AS1A6NIL9 109 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 DEDDO75618 318 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 BTNL3Q6UXE8 466 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 TMEM167BQ9NRX6 74 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 IGHV1OR21-1A0A087WYE8 117 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 M0R1B8 84 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 RAB7AP51149 207 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 FUT5Q11128 374 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 SLC35E3Q7Z769 313 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 BCL2L2Q92843 193 aaPredicted RBP11.31□□□□□ -0.6
COL3A1-201ENST00000304636 CHST5Q9GZS9 411 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 NPDC1Q9NQX5 325 aaPredicted RBP11.31□□□□□ -0.6
COL3A1-201ENST00000304636 MYO9BQ13459 2157 aa11.31□□□□□ -0.6
COL3A1-201ENST00000304636 OR2A4O95047 310 aa11.3□□□□□ -0.6
COL3A1-201ENST00000304636 H2BFSP57053 126 aa11.3□□□□□ -0.6
COL3A1-201ENST00000304636 ELOBQ15370 118 aa11.3□□□□□ -0.6
COL3A1-201ENST00000304636 CEBPEQ15744 281 aa11.3□□□□□ -0.6
COL3A1-201ENST00000304636 ACSM6Q6P461 480 aa11.3□□□□□ -0.6
COL3A1-201ENST00000304636 H1FOOQ8IZA3 346 aaPredicted RBP11.3□□□□□ -0.6
COL3A1-201ENST00000304636 FBXO17Q96EF6 278 aa11.3□□□□□ -0.6
COL3A1-201ENST00000304636 OR2A7Q96R45 310 aa11.3□□□□□ -0.6
COL3A1-201ENST00000304636 KCNK7Q9Y2U2 307 aa11.3□□□□□ -0.6
COL3A1-201ENST00000304636 LOXL2Q9Y4K0 774 aa11.3□□□□□ -0.6
COL3A1-201ENST00000304636 ZNF253O75346 499 aa11.3□□□□□ -0.6
COL3A1-201ENST00000304636 ASAH2BP0C7U1 165 aa11.3□□□□□ -0.6
COL3A1-201ENST00000304636 ZNF880Q6PDB4 577 aa11.3□□□□□ -0.6
COL3A1-201ENST00000304636 GPX7Q96SL4 187 aaPredicted RBP11.3□□□□□ -0.6
COL3A1-201ENST00000304636 ESRP2Q9H6T0 727 aaKnown RBP11.3□□□□□ -0.6
COL3A1-201ENST00000304636 HOXD4P09016 255 aaPredicted RBP11.3□□□□□ -0.6
COL3A1-201ENST00000304636 FAM3BP58499 235 aaPredicted RBP11.3□□□□□ -0.6
COL3A1-201ENST00000304636 GABRG3Q99928 467 aa11.3□□□□□ -0.6
COL3A1-201ENST00000304636 ZPBPQ9BS86 351 aa11.3□□□□□ -0.6
COL3A1-201ENST00000304636 SIGLEC5O15389 551 aa11.3□□□□□ -0.6
COL3A1-201ENST00000304636 IL2RAP01589 272 aa11.3□□□□□ -0.6
COL3A1-201ENST00000304636 TMEM50BP56557 158 aa11.3□□□□□ -0.6
COL3A1-201ENST00000304636 SIGLEC14Q08ET2 396 aa11.3□□□□□ -0.6
COL3A1-201ENST00000304636 PRSS53Q2L4Q9 553 aa11.3□□□□□ -0.6
COL3A1-201ENST00000304636 ZNF260Q3ZCT1 412 aa11.3□□□□□ -0.6
COL3A1-201ENST00000304636 DHRS7BQ6IAN0 325 aaPredicted RBP11.3□□□□□ -0.6
COL3A1-201ENST00000304636 C16orf47Q6ZP98 133 aaPredicted RBP11.3□□□□□ -0.6
COL3A1-201ENST00000304636 RAB24Q969Q5 203 aa11.3□□□□□ -0.6
COL3A1-201ENST00000304636 WFDC6Q9BQY6 131 aa11.3□□□□□ -0.6
COL3A1-201ENST00000304636 SF3B5Q9BWJ5 86 aaKnown RBP11.3□□□□□ -0.6
COL3A1-201ENST00000304636 PLA2G2FQ9BZM2 168 aa11.3□□□□□ -0.6
COL3A1-201ENST00000304636 TLNRD1Q9H1K6 362 aa11.3□□□□□ -0.6
COL3A1-201ENST00000304636 CCL28Q9NRJ3 127 aa11.3□□□□□ -0.6
COL3A1-201ENST00000304636 SLC25A5P05141 298 aaKnown RBP11.29□□□□□ -0.6
COL3A1-201ENST00000304636 VMA21Q3ZAQ7 101 aa11.29□□□□□ -0.6
COL3A1-201ENST00000304636 UNQ9370/PRO34162Q6UXP9 181 aa11.29□□□□□ -0.6
COL3A1-201ENST00000304636 FOXQ1Q9C009 403 aa11.29□□□□□ -0.6
COL3A1-201ENST00000304636 MSL2Q9HCI7 577 aa11.29□□□□□ -0.6
COL3A1-201ENST00000304636 PCOLCE2Q9UKZ9 415 aa11.29□□□□□ -0.6
COL3A1-201ENST00000304636 GPR132Q9UNW8 380 aa11.29□□□□□ -0.6
COL3A1-201ENST00000304636 PGA4P0DJD7 388 aa11.29□□□□□ -0.6
COL3A1-201ENST00000304636 PGA5P0DJD9 388 aa11.29□□□□□ -0.6
COL3A1-201ENST00000304636 PEBP1P30086 187 aaKnown RBP11.29□□□□□ -0.6
COL3A1-201ENST00000304636 RPL13AP40429 203 aaKnown RBP11.29□□□□□ -0.6
COL3A1-201ENST00000304636 ZXDAP98168 799 aa11.29□□□□□ -0.6
COL3A1-201ENST00000304636 FAM219AQ8IW50 185 aa11.29□□□□□ -0.6
COL3A1-201ENST00000304636 CADM4Q8NFZ8 388 aa11.29□□□□□ -0.6
COL3A1-201ENST00000304636 OR10D3Q8NH80 312 aa11.29□□□□□ -0.6
COL3A1-201ENST00000304636 AQP10Q96PS8 301 aa11.29□□□□□ -0.6
COL3A1-201ENST00000304636 TTRP02766 147 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms