RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 FAM90A5PA8MXJ8 464 aa20.27■□□□□ 0.83
HOXC9-201ENST00000303450 FAM90A23PA8MXZ1 464 aa20.27■□□□□ 0.83
HOXC9-201ENST00000303450 NOL3O60936 208 aaKnown RBP20.27■□□□□ 0.83
HOXC9-201ENST00000303450 FAM90A15PP0C7V4 464 aa20.27■□□□□ 0.83
HOXC9-201ENST00000303450 FAM90A13PP0C7W8 464 aa20.27■□□□□ 0.83
HOXC9-201ENST00000303450 FAM90A14PP0C7W9 464 aa20.27■□□□□ 0.83
HOXC9-201ENST00000303450 FAM90A24PP0C7X0 464 aa20.27■□□□□ 0.83
HOXC9-201ENST00000303450 RPS27AP62979 156 aaKnown RBP20.27■□□□□ 0.83
HOXC9-201ENST00000303450 PAN3Q58A45 887 aaKnown RBP20.27■□□□□ 0.83
HOXC9-201ENST00000303450 ATAD3CQ5T2N8 411 aa20.27■□□□□ 0.83
HOXC9-201ENST00000303450 IDNKQ5T6J7 187 aa20.27■□□□□ 0.83
HOXC9-201ENST00000303450 DCAF12L2Q5VW00 463 aa20.27■□□□□ 0.83
HOXC9-201ENST00000303450 METAP1DQ6UB28 335 aaPredicted RBP20.27■□□□□ 0.83
HOXC9-201ENST00000303450 OR4S1Q8NGB4 309 aa20.27■□□□□ 0.83
HOXC9-201ENST00000303450 OR4M2Q8NGB6 313 aa20.27■□□□□ 0.83
HOXC9-201ENST00000303450 NUDT16L1Q9BRJ7 211 aaKnown RBP20.27■□□□□ 0.83
HOXC9-201ENST00000303450 DCTN5Q9BTE1 182 aa20.27■□□□□ 0.83
HOXC9-201ENST00000303450 URM1Q9BTM9 101 aaKnown RBP20.27■□□□□ 0.83
HOXC9-201ENST00000303450 PPA2Q9H2U2 334 aa20.27■□□□□ 0.83
HOXC9-201ENST00000303450 ZNF581Q9P0T4 197 aa20.27■□□□□ 0.83
HOXC9-201ENST00000303450 FBLN5Q9UBX5 448 aa20.27■□□□□ 0.83
HOXC9-201ENST00000303450 RPUSD1Q9UJJ7 312 aaKnown RBP20.27■□□□□ 0.83
HOXC9-201ENST00000303450 KCNS2Q9ULS6 477 aa20.27■□□□□ 0.83
HOXC9-201ENST00000303450 TRAV24A0A0B4J272 114 aa20.26■□□□□ 0.83
HOXC9-201ENST00000303450 IGHV2-70DA0A0C4DH43 119 aa20.26■□□□□ 0.83
HOXC9-201ENST00000303450 TMEM272A0A1B0GTI8 110 aa20.26■□□□□ 0.83
HOXC9-201ENST00000303450 HSPB6O14558 160 aa20.26■□□□□ 0.83
HOXC9-201ENST00000303450 ENSAO43768 121 aaKnown RBP20.26■□□□□ 0.83
HOXC9-201ENST00000303450 OR3A1P47881 315 aa20.26■□□□□ 0.83
HOXC9-201ENST00000303450 BTNL3Q6UXE8 466 aa20.26■□□□□ 0.83
HOXC9-201ENST00000303450 USP43Q70EL4 1123 aa20.26■□□□□ 0.83
HOXC9-201ENST00000303450 POM121Q96HA1 1249 aa20.26■□□□□ 0.83
HOXC9-201ENST00000303450 SPACA1Q9HBV2 294 aa20.26■□□□□ 0.83
HOXC9-201ENST00000303450 RAB22AQ9UL26 194 aa20.26■□□□□ 0.83
HOXC9-201ENST00000303450 MGST3O14880 152 aa20.25■□□□□ 0.83
HOXC9-201ENST00000303450 LDLRAD4O15165 306 aa20.25■□□□□ 0.83
HOXC9-201ENST00000303450 GATA3P23771 443 aa20.25■□□□□ 0.83
HOXC9-201ENST00000303450 EDDM3BP56851 147 aa20.25■□□□□ 0.83
HOXC9-201ENST00000303450 PAX2Q02962 417 aa20.25■□□□□ 0.83
HOXC9-201ENST00000303450 EDDM3AQ14507 147 aa20.25■□□□□ 0.83
HOXC9-201ENST00000303450 FAHD2BQ6P2I3 314 aaPredicted RBP20.25■□□□□ 0.83
HOXC9-201ENST00000303450 SUMF2Q8NBJ7 301 aa20.25■□□□□ 0.83
HOXC9-201ENST00000303450 SLC25A46Q96AG3 418 aa20.25■□□□□ 0.83
HOXC9-201ENST00000303450 FAHD2AQ96GK7 314 aa20.25■□□□□ 0.83
HOXC9-201ENST00000303450 BCL7BQ9BQE9 202 aa20.25■□□□□ 0.83
HOXC9-201ENST00000303450 DPCDQ9BVM2 203 aaPredicted RBP20.25■□□□□ 0.83
HOXC9-201ENST00000303450 TM2D1Q9BX74 207 aa20.25■□□□□ 0.83
HOXC9-201ENST00000303450 DCSTAMPQ9H295 470 aa20.25■□□□□ 0.83
HOXC9-201ENST00000303450 TRBV23-1A0A0A0MS06 115 aa20.24■□□□□ 0.83
HOXC9-201ENST00000303450 KIR2DS1A0A191URI9 304 aa20.24■□□□□ 0.83
HOXC9-201ENST00000303450 H3BUI4 141 aa20.24■□□□□ 0.83
HOXC9-201ENST00000303450 OR4M1Q8NGD0 313 aa20.24■□□□□ 0.83
HOXC9-201ENST00000303450 NDNFQ8TB73 568 aa20.24■□□□□ 0.83
HOXC9-201ENST00000303450 INSIG2Q9Y5U4 225 aa20.24■□□□□ 0.83
HOXC9-201ENST00000303450 A0A1W2PQ09 198 aa20.23■□□□□ 0.83
HOXC9-201ENST00000303450 A8MV72 311 aaPredicted RBP20.23■□□□□ 0.83
HOXC9-201ENST00000303450 TMEM127O75204 238 aa20.23■□□□□ 0.83
HOXC9-201ENST00000303450 LIPFP07098 398 aa20.23■□□□□ 0.83
HOXC9-201ENST00000303450 PPIAL4GP0DN37 164 aa20.23■□□□□ 0.83
HOXC9-201ENST00000303450 SNRPBP14678 240 aaKnown RBP20.23■□□□□ 0.83
HOXC9-201ENST00000303450 RPL31P62899 125 aaKnown RBP20.23■□□□□ 0.83
HOXC9-201ENST00000303450 ATXN7L3Q14CW9 347 aaPredicted RBP20.23■□□□□ 0.83
HOXC9-201ENST00000303450 Q71RC1 249 aaPredicted RBP20.23■□□□□ 0.83
HOXC9-201ENST00000303450 BPIFB2Q8N4F0 458 aa20.23■□□□□ 0.83
HOXC9-201ENST00000303450 DACT3Q96B18 629 aaPredicted RBP20.23■□□□□ 0.83
HOXC9-201ENST00000303450 NICN1Q9BSH3 213 aa20.23■□□□□ 0.83
HOXC9-201ENST00000303450 LPAR5Q9H1C0 372 aa20.23■□□□□ 0.83
HOXC9-201ENST00000303450 CCDC160A6NGH7 325 aa20.22■□□□□ 0.83
HOXC9-201ENST00000303450 CSN2P05814 226 aa20.22■□□□□ 0.83
HOXC9-201ENST00000303450 PLA2G7Q13093 441 aa20.22■□□□□ 0.83
HOXC9-201ENST00000303450 RAB12Q6IQ22 244 aa20.22■□□□□ 0.83
HOXC9-201ENST00000303450 FAM185AQ8N0U4 392 aa20.22■□□□□ 0.83
HOXC9-201ENST00000303450 C8orf46Q8TAG6 207 aa20.22■□□□□ 0.83
HOXC9-201ENST00000303450 NEK7Q8TDX7 302 aa20.22■□□□□ 0.83
HOXC9-201ENST00000303450 ISOC1Q96CN7 298 aa20.22■□□□□ 0.83
HOXC9-201ENST00000303450 NEDD4LQ96PU5 975 aa20.22■□□□□ 0.83
HOXC9-201ENST00000303450 MRI1Q9BV20 369 aa20.22■□□□□ 0.83
HOXC9-201ENST00000303450 C19orf12Q9NSK7 152 aa20.22■□□□□ 0.83
HOXC9-201ENST00000303450 ING3Q9NXR8 418 aa20.22■□□□□ 0.83
HOXC9-201ENST00000303450 PEX16Q9Y5Y5 336 aa20.22■□□□□ 0.83
HOXC9-201ENST00000303450 CEPT1Q9Y6K0 416 aa20.22■□□□□ 0.83
HOXC9-201ENST00000303450 FUOMA2VDF0 154 aa20.22■□□□□ 0.83
HOXC9-201ENST00000303450 PAHP00439 452 aa20.22■□□□□ 0.83
HOXC9-201ENST00000303450 RAB6AP20340 208 aa20.22■□□□□ 0.83
HOXC9-201ENST00000303450 FUT3P21217 361 aa20.22■□□□□ 0.83
HOXC9-201ENST00000303450 AESQ08117 197 aa20.22■□□□□ 0.83
HOXC9-201ENST00000303450 BLMHQ13867 455 aa20.22■□□□□ 0.83
HOXC9-201ENST00000303450 FAM189A2Q15884 450 aa20.22■□□□□ 0.83
HOXC9-201ENST00000303450 BRICD5Q6PL45 260 aa20.22■□□□□ 0.83
HOXC9-201ENST00000303450 LY6G5BQ8NDX9 201 aa20.22■□□□□ 0.83
HOXC9-201ENST00000303450 LGALS14Q8TCE9 139 aa20.22■□□□□ 0.83
HOXC9-201ENST00000303450 PTX4Q96A99 478 aa20.22■□□□□ 0.83
HOXC9-201ENST00000303450 BARHL1Q9BZE3 327 aa20.22■□□□□ 0.83
HOXC9-201ENST00000303450 RCC2Q9P258 522 aaKnown RBP20.22■□□□□ 0.83
HOXC9-201ENST00000303450 MCRIP1C9JLW8 97 aa20.21■□□□□ 0.83
HOXC9-201ENST00000303450 PDCD6O75340 191 aa20.21■□□□□ 0.83
HOXC9-201ENST00000303450 ERP29P30040 261 aaKnown RBP20.21■□□□□ 0.83
HOXC9-201ENST00000303450 KCNJ3P48549 501 aa20.21■□□□□ 0.83
HOXC9-201ENST00000303450 EFNB2P52799 333 aa20.21■□□□□ 0.83
HOXC9-201ENST00000303450 RBM39Q14498 530 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms