RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 TMEM272A0A1B0GTI8 110 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 ARRDC5A6NEK1 342 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 MYOGP15173 224 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 MEOX2P50222 304 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 HERPUD1Q15011 391 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 PABPC1L2AQ5JQF8 200 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 ZNF774Q6NX45 483 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 FAM219AQ8IW50 185 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 ANGPTL4Q9BY76 406 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 SLC17A5Q9NRA2 495 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 MRPS16Q9Y3D3 137 aaKnown RBP9.23□□□□□ -0.93
CLIP1-201ENST00000302528 LIPGQ9Y5X9 500 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 C9orf170A2RU37 121 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 PDCD6O75340 191 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 SMIM18P0DKX4 95 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 GABRA1P14867 456 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 OR4A47Q6IF82 309 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 RNF165Q6ZSG1 346 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 LINC00469Q8N7U9 141 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 ZNF441Q8N8Z8 693 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 SSMEM1Q8WWF3 244 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 SNX22Q96L94 193 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 ASB16Q96NS5 453 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 UBTD1Q9HAC8 227 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 TCF21O43680 179 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 DHRS2Q13268 280 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 MCHR2Q969V1 340 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 CYB5R1Q9UHQ9 305 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 KCNAB3O43448 404 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 SDHBP21912 280 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 NAAAQ02083 359 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 ECSCRQ19T08 205 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 OR8D4Q8NGM9 314 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 ZNF707Q96C28 371 aaPredicted RBP9.22□□□□□ -0.93
CLIP1-201ENST00000302528 PITPNC1Q9UKF7 332 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 PAM16Q9Y3D7 125 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 SRSF10O75494 262 aaKnown RBP9.22□□□□□ -0.93
CLIP1-201ENST00000302528 IER3P46695 156 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 SSX8Q7RTT4 187 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 HEXA-AS1Q9H8Q6 139 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 FUT9Q9Y231 359 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 SNURFLB1AK76 121 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 ZNF32P17041 273 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 BTF3P20290 206 aaKnown RBP9.22□□□□□ -0.93
CLIP1-201ENST00000302528 PLP1P60201 277 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 CACNG7P62955 275 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 FOXO1Q12778 655 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 PRSS54Q6PEW0 395 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 PIPOXQ9P0Z9 390 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 RER1O15258 196 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 MPC2O95563 127 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 MAS1LP35410 378 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 AESQ08117 197 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 MRPL58Q14197 206 aaKnown RBP9.22□□□□□ -0.93
CLIP1-201ENST00000302528 EBLN2Q6P2I7 272 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 GBGT1Q8N5D6 347 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 BVESQ8NE79 360 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 VN1R17PQ8TDU5 208 aa9.22□□□□□ -0.93
CLIP1-201ENST00000302528 WNT1P04628 370 aa9.21□□□□□ -0.93
CLIP1-201ENST00000302528 ARG1P05089 322 aa9.21□□□□□ -0.93
CLIP1-201ENST00000302528 POLR2GP62487 172 aaKnown RBP eCLIP9.21□□□□□ -0.93
CLIP1-201ENST00000302528 YBX1P67809 324 aaKnown RBP9.21□□□□□ -0.93
CLIP1-201ENST00000302528 TWIST1Q15672 202 aa9.21□□□□□ -0.93
CLIP1-201ENST00000302528 WDR38Q5JTN6 314 aa9.21□□□□□ -0.93
CLIP1-201ENST00000302528 ZNF880Q6PDB4 577 aa9.21□□□□□ -0.93
CLIP1-201ENST00000302528 ZNF793Q6ZN11 406 aa9.21□□□□□ -0.93
CLIP1-201ENST00000302528 MUC20Q8N307 709 aaPredicted RBP9.21□□□□□ -0.93
CLIP1-201ENST00000302528 YIPF6Q96EC8 236 aa9.21□□□□□ -0.93
CLIP1-201ENST00000302528 SIRT5Q9NXA8 310 aa9.21□□□□□ -0.93
CLIP1-201ENST00000302528 IGKV3D-15A0A087WSY6 115 aa9.21□□□□□ -0.93
CLIP1-201ENST00000302528 IGKV3-15P01624 115 aa9.21□□□□□ -0.93
CLIP1-201ENST00000302528 TMIGD3P0DMS9 266 aaPredicted RBP9.21□□□□□ -0.93
CLIP1-201ENST00000302528 FABP2P12104 132 aa9.21□□□□□ -0.93
CLIP1-201ENST00000302528 GUCA2BQ16661 112 aa9.21□□□□□ -0.93
CLIP1-201ENST00000302528 LRRC75BQ2VPJ9 315 aa9.21□□□□□ -0.93
CLIP1-201ENST00000302528 MZB1Q8WU39 189 aa9.21□□□□□ -0.93
CLIP1-201ENST00000302528 SLC25A37Q9NYZ2 338 aa9.21□□□□□ -0.93
CLIP1-201ENST00000302528 MTCH2Q9Y6C9 303 aa9.21□□□□□ -0.93
CLIP1-201ENST00000302528 CITO14578 2027 aa9.21□□□□□ -0.94
CLIP1-201ENST00000302528 MBPP02686 304 aaPredicted RBP9.21□□□□□ -0.94
CLIP1-201ENST00000302528 CCL2P13500 99 aa9.21□□□□□ -0.94
CLIP1-201ENST00000302528 ID4P47928 161 aa9.21□□□□□ -0.94
CLIP1-201ENST00000302528 IGSF11Q5DX21 431 aa9.21□□□□□ -0.94
CLIP1-201ENST00000302528 SYT8Q8NBV8 401 aa9.21□□□□□ -0.94
CLIP1-201ENST00000302528 COL25A1Q9BXS0 654 aaPredicted RBP9.21□□□□□ -0.94
CLIP1-201ENST00000302528 SOX21Q9Y651 276 aaPredicted RBP9.21□□□□□ -0.94
CLIP1-201ENST00000302528 GEMIN2O14893 280 aaKnown RBP9.21□□□□□ -0.94
CLIP1-201ENST00000302528 TSPAN13O95857 204 aa9.21□□□□□ -0.94
CLIP1-201ENST00000302528 PRSS2P07478 247 aa9.21□□□□□ -0.94
CLIP1-201ENST00000302528 PGA4P0DJD7 388 aa9.21□□□□□ -0.94
CLIP1-201ENST00000302528 PGA5P0DJD9 388 aa9.21□□□□□ -0.94
CLIP1-201ENST00000302528 MYF5P13349 255 aa9.21□□□□□ -0.94
CLIP1-201ENST00000302528 GFRA1P56159 465 aa9.21□□□□□ -0.94
CLIP1-201ENST00000302528 LOXL3P58215 753 aa9.21□□□□□ -0.94
CLIP1-201ENST00000302528 FMODQ06828 376 aa9.21□□□□□ -0.94
CLIP1-201ENST00000302528 LGALSLQ3ZCW2 172 aaPredicted RBP9.21□□□□□ -0.94
CLIP1-201ENST00000302528 AWAT1Q58HT5 328 aa9.21□□□□□ -0.94
CLIP1-201ENST00000302528 ZNF738Q8NE65 137 aa9.21□□□□□ -0.94
CLIP1-201ENST00000302528 SGK494Q96LW2 274 aa9.21□□□□□ -0.94
CLIP1-201ENST00000302528 P2RX4Q99571 388 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms