RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 PPIAL4AQ9Y536 164 aa12.62□□□□□ -0.39
UBXN1-202ENST00000301935 TANC2Q9HCD6 1990 aa12.61□□□□□ -0.39
UBXN1-202ENST00000301935 A0A1W2PP11 408 aa12.61□□□□□ -0.39
UBXN1-202ENST00000301935 OR2AT4A6NND4 320 aa12.61□□□□□ -0.39
UBXN1-202ENST00000301935 F8VVB4 439 aa12.61□□□□□ -0.39
UBXN1-202ENST00000301935 F8VWA3 439 aa12.61□□□□□ -0.39
UBXN1-202ENST00000301935 DEGS1O15121 323 aa12.61□□□□□ -0.39
UBXN1-202ENST00000301935 RP2O75695 350 aa12.61□□□□□ -0.39
UBXN1-202ENST00000301935 CYB5R3P00387 301 aaPredicted RBP12.61□□□□□ -0.39
UBXN1-202ENST00000301935 COL8A2P25067 703 aa12.61□□□□□ -0.39
UBXN1-202ENST00000301935 BLVRBP30043 206 aaPredicted RBP12.61□□□□□ -0.39
UBXN1-202ENST00000301935 SRP14P37108 136 aaKnown RBP12.61□□□□□ -0.39
UBXN1-202ENST00000301935 VEGFCP49767 419 aa12.61□□□□□ -0.39
UBXN1-202ENST00000301935 RBM39Q14498 530 aaKnown RBP12.61□□□□□ -0.39
UBXN1-202ENST00000301935 ATPAF1Q5TC12 328 aaPredicted RBP12.61□□□□□ -0.39
UBXN1-202ENST00000301935 CNIH2Q6PI25 160 aa12.61□□□□□ -0.39
UBXN1-202ENST00000301935 MUC20Q8N307 709 aaPredicted RBP12.61□□□□□ -0.39
UBXN1-202ENST00000301935 PIP4P2Q8N4L2 257 aa12.61□□□□□ -0.39
UBXN1-202ENST00000301935 RAB3CQ96E17 227 aa12.61□□□□□ -0.39
UBXN1-202ENST00000301935 TSC22D3Q99576 134 aa12.61□□□□□ -0.39
UBXN1-202ENST00000301935 KCNK15Q9H427 330 aa12.61□□□□□ -0.39
UBXN1-202ENST00000301935 EXTL2Q9UBQ6 330 aa12.61□□□□□ -0.39
UBXN1-202ENST00000301935 FABP12A6NFH5 140 aa12.6□□□□□ -0.39
UBXN1-202ENST00000301935 RAB27BO00194 218 aa12.6□□□□□ -0.39
UBXN1-202ENST00000301935 GEMIN2O14893 280 aaKnown RBP12.6□□□□□ -0.39
UBXN1-202ENST00000301935 WNT9BO14905 357 aa12.6□□□□□ -0.39
UBXN1-202ENST00000301935 PDCD6O75340 191 aa12.6□□□□□ -0.39
UBXN1-202ENST00000301935 OR7C1O76099 320 aaPredicted RBP12.6□□□□□ -0.39
UBXN1-202ENST00000301935 GSTP1P09211 210 aaKnown RBP12.6□□□□□ -0.39
UBXN1-202ENST00000301935 GABRR1P24046 479 aa12.6□□□□□ -0.39
UBXN1-202ENST00000301935 CDK2P24941 298 aa12.6□□□□□ -0.39
UBXN1-202ENST00000301935 LMO1P25800 156 aa12.6□□□□□ -0.39
UBXN1-202ENST00000301935 PRDX2P32119 198 aa12.6□□□□□ -0.39
UBXN1-202ENST00000301935 MDH2P40926 338 aaKnown RBP12.6□□□□□ -0.39
UBXN1-202ENST00000301935 KCNJ3P48549 501 aa12.6□□□□□ -0.39
UBXN1-202ENST00000301935 MRPS10P82664 201 aaKnown RBP12.6□□□□□ -0.39
UBXN1-202ENST00000301935 IKZF1Q13422 519 aa12.6□□□□□ -0.39
UBXN1-202ENST00000301935 LSAMPQ13449 338 aa12.6□□□□□ -0.39
UBXN1-202ENST00000301935 TAF9Q16594 264 aa12.6□□□□□ -0.39
UBXN1-202ENST00000301935 PIGYQ3MUY2 71 aa12.6□□□□□ -0.39
UBXN1-202ENST00000301935 TMEM69Q5SWH9 247 aa12.6□□□□□ -0.39
UBXN1-202ENST00000301935 PYHIN1Q6K0P9 492 aa12.6□□□□□ -0.39
UBXN1-202ENST00000301935 Q6ZTK2 550 aa12.6□□□□□ -0.39
UBXN1-202ENST00000301935 BOLLQ8N9W6 283 aaKnown RBP12.6□□□□□ -0.39
UBXN1-202ENST00000301935 PPP1R35Q8TAP8 253 aa12.6□□□□□ -0.39
UBXN1-202ENST00000301935 YIPF5Q969M3 257 aa12.6□□□□□ -0.39
UBXN1-202ENST00000301935 MED30Q96HR3 178 aa12.6□□□□□ -0.39
UBXN1-202ENST00000301935 WDR13Q9H1Z4 485 aa12.6□□□□□ -0.39
UBXN1-202ENST00000301935 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.6□□□□□ -0.39
UBXN1-202ENST00000301935 PLEKHJ1Q9NW61 149 aa12.6□□□□□ -0.39
UBXN1-202ENST00000301935 RFPL4AA6NLU0 287 aa12.59□□□□□ -0.39
UBXN1-202ENST00000301935 POM121CA8CG34 1229 aa12.59□□□□□ -0.39
UBXN1-202ENST00000301935 SERPINE3A8MV23 424 aa12.59□□□□□ -0.39
UBXN1-202ENST00000301935 MCRIP1C9JLW8 97 aa12.59□□□□□ -0.39
UBXN1-202ENST00000301935 RFPL4AL1F8VTS6 287 aa12.59□□□□□ -0.39
UBXN1-202ENST00000301935 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.59□□□□□ -0.39
UBXN1-202ENST00000301935 CA11O75493 328 aa12.59□□□□□ -0.39
UBXN1-202ENST00000301935 HAND1O96004 215 aa12.59□□□□□ -0.39
UBXN1-202ENST00000301935 PSG2P11465 335 aa12.59□□□□□ -0.39
UBXN1-202ENST00000301935 EGR1P18146 543 aa12.59□□□□□ -0.39
UBXN1-202ENST00000301935 BTG1P62324 171 aa12.59□□□□□ -0.39
UBXN1-202ENST00000301935 PLA2G7Q13093 441 aa12.59□□□□□ -0.39
UBXN1-202ENST00000301935 PNLIPRP3Q17RR3 467 aa12.59□□□□□ -0.39
UBXN1-202ENST00000301935 Q6P435 159 aa12.59□□□□□ -0.39
UBXN1-202ENST00000301935 ZNF561Q8N587 486 aa12.59□□□□□ -0.39
UBXN1-202ENST00000301935 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.59□□□□□ -0.39
UBXN1-202ENST00000301935 OR4M1Q8NGD0 313 aa12.59□□□□□ -0.39
UBXN1-202ENST00000301935 ANGPTL6Q8NI99 470 aa12.59□□□□□ -0.39
UBXN1-202ENST00000301935 SOSTQ9BQB4 213 aa12.59□□□□□ -0.39
UBXN1-202ENST00000301935 WDR12Q9GZL7 423 aaKnown RBP12.59□□□□□ -0.39
UBXN1-202ENST00000301935 TREM2Q9NZC2 230 aa12.59□□□□□ -0.39
UBXN1-202ENST00000301935 RCC2Q9P258 522 aaKnown RBP12.59□□□□□ -0.39
UBXN1-202ENST00000301935 CACNG2Q9Y698 323 aa12.59□□□□□ -0.39
UBXN1-202ENST00000301935 TRAV18A0A075B6X5 111 aa12.58□□□□□ -0.4
UBXN1-202ENST00000301935 NKX6-3A6NJ46 265 aa12.58□□□□□ -0.4
UBXN1-202ENST00000301935 FOXI3A8MTJ6 420 aaPredicted RBP12.58□□□□□ -0.4
UBXN1-202ENST00000301935 C3orf80F5H4A9 247 aa12.58□□□□□ -0.4
UBXN1-202ENST00000301935 CTDSPLO15194 276 aa12.58□□□□□ -0.4
UBXN1-202ENST00000301935 SOCS1O15524 211 aa12.58□□□□□ -0.4
UBXN1-202ENST00000301935 PPIHO43447 177 aaKnown RBP12.58□□□□□ -0.4
UBXN1-202ENST00000301935 OR2H2O95918 312 aa12.58□□□□□ -0.4
UBXN1-202ENST00000301935 MELTFP08582 738 aa12.58□□□□□ -0.4
UBXN1-202ENST00000301935 ZNF44P15621 663 aa12.58□□□□□ -0.4
UBXN1-202ENST00000301935 HIST1H1DP16402 221 aaKnown RBP12.58□□□□□ -0.4
UBXN1-202ENST00000301935 CHATP28329 748 aa12.58□□□□□ -0.4
UBXN1-202ENST00000301935 CD80P33681 288 aa12.58□□□□□ -0.4
UBXN1-202ENST00000301935 DVL1P1P54792 670 aaPredicted RBP12.58□□□□□ -0.4
UBXN1-202ENST00000301935 TMEM50BP56557 158 aa12.58□□□□□ -0.4
UBXN1-202ENST00000301935 GMFBP60983 142 aa12.58□□□□□ -0.4
UBXN1-202ENST00000301935 CDNFQ49AH0 187 aa12.58□□□□□ -0.4
UBXN1-202ENST00000301935 TMEM155Q4W5P6 130 aa12.58□□□□□ -0.4
UBXN1-202ENST00000301935 STUMQ69YW2 141 aa12.58□□□□□ -0.4
UBXN1-202ENST00000301935 FAM131AQ6UXB0 335 aa12.58□□□□□ -0.4
UBXN1-202ENST00000301935 SLC36A1Q7Z2H8 476 aa12.58□□□□□ -0.4
UBXN1-202ENST00000301935 OR5D13Q8NGL4 314 aa12.58□□□□□ -0.4
UBXN1-202ENST00000301935 SDSLQ96GA7 329 aa12.58□□□□□ -0.4
UBXN1-202ENST00000301935 NICN1Q9BSH3 213 aa12.58□□□□□ -0.4
UBXN1-202ENST00000301935 ZNF665Q9H7R5 613 aa12.58□□□□□ -0.4
UBXN1-202ENST00000301935 TMEM165Q9HC07 324 aa12.58□□□□□ -0.4
UBXN1-202ENST00000301935 KAAG1Q9UBP8 84 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms