RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 AQP10Q96PS8 301 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 RNF126Q9BV68 326 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 ST6GALNAC5Q9BVH7 336 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 REPIN1Q9BWE0 567 aaKnown RBP14.42□□□□□ -0.1
CPSF4-201ENST00000292476 OPN3Q9H1Y3 402 aaPredicted RBP14.42□□□□□ -0.1
CPSF4-201ENST00000292476 CDH20Q9HBT6 801 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 TUBG2Q9NRH3 451 aa14.42□□□□□ -0.1
CPSF4-201ENST00000292476 C14orf166Q9Y224 244 aaKnown RBP14.42□□□□□ -0.1
CPSF4-201ENST00000292476 SVILO95425 2214 aa14.41□□□□□ -0.1
CPSF4-201ENST00000292476 C13orf42A0A1B0GVH6 325 aa14.41□□□□□ -0.1
CPSF4-201ENST00000292476 FGF16O43320 207 aa14.41□□□□□ -0.1
CPSF4-201ENST00000292476 IL32P24001 234 aa14.41□□□□□ -0.1
CPSF4-201ENST00000292476 OR5D18Q8NGL1 313 aa14.41□□□□□ -0.1
CPSF4-201ENST00000292476 IL36GQ9NZH8 169 aa14.41□□□□□ -0.1
CPSF4-201ENST00000292476 SLC7A11Q9UPY5 501 aa14.41□□□□□ -0.1
CPSF4-201ENST00000292476 RP1L1Q8IWN7 2480 aaPredicted RBP14.4□□□□□ -0.1
CPSF4-201ENST00000292476 OR5H1A6NKK0 313 aa14.4□□□□□ -0.1
CPSF4-201ENST00000292476 NRASP01111 189 aa14.4□□□□□ -0.1
CPSF4-201ENST00000292476 IGKV3-15P01624 115 aa14.4□□□□□ -0.1
CPSF4-201ENST00000292476 CTSDP07339 412 aaPredicted RBP14.4□□□□□ -0.1
CPSF4-201ENST00000292476 GNLYP22749 145 aa14.4□□□□□ -0.1
CPSF4-201ENST00000292476 SSX8Q7RTT4 187 aa14.4□□□□□ -0.1
CPSF4-201ENST00000292476 NPRL2Q8WTW4 380 aa14.4□□□□□ -0.1
CPSF4-201ENST00000292476 PIGTQ969N2 578 aa14.4□□□□□ -0.1
CPSF4-201ENST00000292476 TMEM100Q9NV29 134 aa14.4□□□□□ -0.1
CPSF4-201ENST00000292476 PLEKHJ1Q9NW61 149 aa14.4□□□□□ -0.1
CPSF4-201ENST00000292476 C1orf123Q9NWV4 160 aa14.4□□□□□ -0.1
CPSF4-201ENST00000292476 TAS2R3Q9NYW6 316 aa14.4□□□□□ -0.1
CPSF4-201ENST00000292476 PGAM2P15259 253 aa14.39□□□□□ -0.11
CPSF4-201ENST00000292476 MTCP1P56278 107 aa14.39□□□□□ -0.11
CPSF4-201ENST00000292476 EIF5AP63241 154 aaKnown RBP14.39□□□□□ -0.11
CPSF4-201ENST00000292476 IL15RAQ13261 267 aa14.39□□□□□ -0.11
CPSF4-201ENST00000292476 SLC9A3R2Q15599 337 aa14.39□□□□□ -0.11
CPSF4-201ENST00000292476 ANKRD55Q3KP44 614 aa14.39□□□□□ -0.11
CPSF4-201ENST00000292476 TIMM23BQ5SRD1 257 aa14.39□□□□□ -0.11
CPSF4-201ENST00000292476 MRGPRGQ86SM5 289 aa14.39□□□□□ -0.11
CPSF4-201ENST00000292476 POC1AQ8NBT0 407 aa14.39□□□□□ -0.11
CPSF4-201ENST00000292476 NAXEQ8NCW5 288 aa14.39□□□□□ -0.11
CPSF4-201ENST00000292476 PCDHB16Q9NRJ7 776 aa14.39□□□□□ -0.11
CPSF4-201ENST00000292476 ELOVL5Q9NYP7 299 aa14.39□□□□□ -0.11
CPSF4-201ENST00000292476 LGALS8O00214 317 aa14.39□□□□□ -0.11
CPSF4-201ENST00000292476 TAAR5O14804 337 aa14.39□□□□□ -0.11
CPSF4-201ENST00000292476 IFNA2P01563 188 aa14.39□□□□□ -0.11
CPSF4-201ENST00000292476 TMEM225BP0DP42 221 aa14.39□□□□□ -0.11
CPSF4-201ENST00000292476 CCL2P13500 99 aa14.39□□□□□ -0.11
CPSF4-201ENST00000292476 ACKR3P25106 362 aa14.39□□□□□ -0.11
CPSF4-201ENST00000292476 PMELP40967 661 aa14.39□□□□□ -0.11
CPSF4-201ENST00000292476 FUT6P51993 359 aa14.39□□□□□ -0.11
CPSF4-201ENST00000292476 C3orf36Q3SXR2 165 aa14.39□□□□□ -0.11
CPSF4-201ENST00000292476 FAM74A1Q5RGS3 127 aa14.39□□□□□ -0.11
CPSF4-201ENST00000292476 BAP18Q8IXM2 172 aa14.39□□□□□ -0.11
CPSF4-201ENST00000292476 WDR31Q8NA23 367 aa14.39□□□□□ -0.11
CPSF4-201ENST00000292476 ZSCAN4Q8NAM6 433 aaPredicted RBP14.39□□□□□ -0.11
CPSF4-201ENST00000292476 MARC2Q969Z3 335 aa14.39□□□□□ -0.11
CPSF4-201ENST00000292476 ELL3Q9HB65 397 aaPredicted RBP14.39□□□□□ -0.11
CPSF4-201ENST00000292476 GPR173Q9NS66 373 aa14.39□□□□□ -0.11
CPSF4-201ENST00000292476 STARD10Q9Y365 291 aa14.39□□□□□ -0.11
CPSF4-201ENST00000292476 TENM4Q6N022 2769 aa14.38□□□□□ -0.11
CPSF4-201ENST00000292476 H0YIZ8 118 aa14.38□□□□□ -0.11
CPSF4-201ENST00000292476 CSTBP04080 98 aaKnown RBP14.38□□□□□ -0.11
CPSF4-201ENST00000292476 RBP2P50120 134 aa14.38□□□□□ -0.11
CPSF4-201ENST00000292476 IDH3GP51553 393 aaPredicted RBP14.38□□□□□ -0.11
CPSF4-201ENST00000292476 RSU1Q15404 277 aa14.38□□□□□ -0.11
CPSF4-201ENST00000292476 BEX5Q5H9J7 111 aa14.38□□□□□ -0.11
CPSF4-201ENST00000292476 ELP2Q6IA86 826 aa14.38□□□□□ -0.11
CPSF4-201ENST00000292476 RPRMLQ8N4K4 120 aa14.38□□□□□ -0.11
CPSF4-201ENST00000292476 MUCL1Q96DR8 90 aa14.38□□□□□ -0.11
CPSF4-201ENST00000292476 BORCS8Q96FH0 119 aa14.38□□□□□ -0.11
CPSF4-201ENST00000292476 VKORC1Q9BQB6 163 aa14.38□□□□□ -0.11
CPSF4-201ENST00000292476 METTL8Q9H825 291 aaKnown RBP14.38□□□□□ -0.11
CPSF4-201ENST00000292476 ANXA10Q9UJ72 324 aa14.38□□□□□ -0.11
CPSF4-201ENST00000292476 ESPL1Q14674 2120 aa14.37□□□□□ -0.11
CPSF4-201ENST00000292476 A8MXE2 369 aa14.37□□□□□ -0.11
CPSF4-201ENST00000292476 SDCBPO00560 298 aaPredicted RBP14.37□□□□□ -0.11
CPSF4-201ENST00000292476 HTR3BO95264 441 aa14.37□□□□□ -0.11
CPSF4-201ENST00000292476 CST4P01036 141 aa14.37□□□□□ -0.11
CPSF4-201ENST00000292476 SELEP16581 610 aa14.37□□□□□ -0.11
CPSF4-201ENST00000292476 RBMXP38159 391 aaKnown RBP14.37□□□□□ -0.11
CPSF4-201ENST00000292476 ZNF474Q6S9Z5 364 aaPredicted RBP14.37□□□□□ -0.11
CPSF4-201ENST00000292476 ST6GALNAC3Q8NDV1 305 aa14.37□□□□□ -0.11
CPSF4-201ENST00000292476 RNF141Q8WVD5 230 aa14.37□□□□□ -0.11
CPSF4-201ENST00000292476 HIST1H2AAQ96QV6 131 aa14.37□□□□□ -0.11
CPSF4-201ENST00000292476 CYTL1Q9NRR1 136 aa14.37□□□□□ -0.11
CPSF4-201ENST00000292476 ZNF701Q9NV72 531 aaPredicted RBP14.37□□□□□ -0.11
CPSF4-201ENST00000292476 MYO18BQ8IUG5 2567 aa14.37□□□□□ -0.11
CPSF4-201ENST00000292476 BAHCC1Q9P281 2608 aa14.37□□□□□ -0.11
CPSF4-201ENST00000292476 CRYM-AS1A6NIL9 109 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 ADAP1O75689 374 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 BMP5P22003 454 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 GLRA1P23415 457 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 GABRR1P24046 479 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 CHATP28329 748 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 ZNF273Q14593 569 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 C6orf201Q7Z4U5 140 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 ZGRF1Q86YA3 2104 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 SGPP2Q8IWX5 399 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 PIGCQ92535 297 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 RND1Q92730 232 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 RRNAD1Q96FB5 475 aaKnown RBP14.36□□□□□ -0.11
CPSF4-201ENST00000292476 NECAP2Q9NVZ3 263 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms