RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 ZFP36L2P47974 494 aaKnown RBP10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 OR4N2Q8NGD1 307 aa10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 OR51F2Q8NH61 342 aa10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 PTPMT1Q8WUK0 201 aaPredicted RBP10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 MOB1AQ9H8S9 216 aa10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 MED29Q9NX70 200 aa10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 A8MXK9 166 aa10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 CTXN2P0C2S0 81 aa10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 FGF8P55075 233 aaPredicted RBP10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 SSX8Q7RTT4 187 aa10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 C11orf42Q8N5U0 333 aa10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 HIST1H2BAQ96A08 127 aa10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 TBX15Q96SF7 602 aa10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 ZNF275Q9NSD4 429 aaPredicted RBP10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 RAXQ9Y2V3 346 aa10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 NEUROG3Q9Y4Z2 214 aa10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 FCN1O00602 326 aa10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 ARPC3O15145 178 aa10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 IGHV3-9P01782 118 aa10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 RCC1P18754 421 aaPredicted RBP10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 NAAAQ02083 359 aa10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 CLN3Q13286 438 aa10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 PRSS33Q8NF86 280 aa10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 ROBO4Q8WZ75 1007 aa10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 MRPS18AQ9NVS2 196 aaKnown RBP10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 PPP1R3CQ9UQK1 317 aa10.03□□□□□ -0.8
NPC1L1-201ENST00000289547 CDX1P47902 265 aaPredicted RBP10.02□□□□□ -0.8
NPC1L1-201ENST00000289547 ERVFC1-1P60608 527 aa10.02□□□□□ -0.8
NPC1L1-201ENST00000289547 UNQ6494/PRO21346Q6UXR6 183 aa10.02□□□□□ -0.8
NPC1L1-201ENST00000289547 H2BFWTQ7Z2G1 175 aa10.02□□□□□ -0.8
NPC1L1-201ENST00000289547 TXNIPQ9H3M7 391 aa10.02□□□□□ -0.8
NPC1L1-201ENST00000289547 TMED3Q9Y3Q3 217 aa10.02□□□□□ -0.8
NPC1L1-201ENST00000289547 PDCD11Q14690 1871 aaKnown RBP10.02□□□□□ -0.8
NPC1L1-201ENST00000289547 A0A0B4J2E0 115 aa10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 A0A1B0GX12 115 aa10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 DUXBA0A1W2PPF3 345 aa10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 CLEC18AA5D8T8 446 aa10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 DNASE2O00115 360 aaPredicted RBP10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 OR10J4P0C629 311 aa10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 ZNF17P17021 662 aa10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 RPL24P83731 157 aaKnown RBP10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 ZNF117Q03924 483 aa10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 FHL5Q5TD97 284 aa10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 CATSPERDQ86XM0 798 aa10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 CLEC18CQ8NCF0 446 aa10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 SOX7Q9BT81 388 aa10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 ALX4Q9H161 411 aaPredicted RBP10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 FRMPD3Q5JV73 1810 aa10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 UBE2L5PA0A1B0GUS4 154 aa10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 ST8SIA5O15466 376 aa10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 HOXB1P14653 301 aaPredicted RBP10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 CRISP2P16562 243 aa10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 C21orf58P58505 322 aa10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 CEBPEQ15744 281 aa10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 ADIPOR1Q96A54 375 aa10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 B3GAT1Q9P2W7 334 aa10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 METTL1Q9UBP6 276 aaKnown RBP10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 ZNF729A6NN14 1252 aaPredicted RBP10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 B4DEV8 164 aa10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 ADAM11O75078 769 aa10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 SLC25A6P12236 298 aa10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 ATP5SQ99766 215 aa10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 ESRP2Q9H6T0 727 aaKnown RBP10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 KCNMB2Q9Y691 235 aa10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 DNAJC13O75165 2243 aa10.02□□□□□ -0.81
NPC1L1-201ENST00000289547 SLC25A1P53007 311 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 H2BFSP57053 126 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 FZD5Q13467 585 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 IL13RA2Q14627 380 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 DHRS7BQ6IAN0 325 aaPredicted RBP10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 MOB1BQ7L9L4 216 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 FBXL14Q8N1E6 418 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 STARD4Q96DR4 205 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 PRSS50Q9UI38 385 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 A0A087WUJ7 227 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 CHEK1O14757 476 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 HS3ST1O14792 307 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 ZNF737O75373 536 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 PRF1P14222 555 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 MAGEA5P43359 124 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 MYOFQ9NZM1 2061 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 NTN3O00634 580 aaPredicted RBP10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 FBP1P09467 338 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 CT62P0C5K7 136 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 EDN3P14138 238 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 CDKN2AP42771 156 aaKnown RBP10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 ZNF141Q15928 474 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 ZNF124Q15973 351 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 FAM162BQ5T6X4 162 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 OR2AE1Q8NHA4 323 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 HS3ST3B1Q9Y662 390 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 TRAV8-7A0A075B6U6 113 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 K7ERU9 68 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 GAMTQ14353 236 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 MPV17LQ2QL34 196 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 VN1R17PQ8TDU5 208 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 RDH5Q92781 318 aa10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 RCC2Q9P258 522 aaKnown RBP10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 MRM2Q9UI43 246 aaKnown RBP10.01□□□□□ -0.81
NPC1L1-201ENST00000289547 MSRB2Q9Y3D2 182 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms