RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 MAMSTRQ6ZN01 415 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 CA5BP1Q8WTZ4 195 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 SDK2Q58EX2 2172 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 TAF1P21675 1872 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 HMSDA8MTL9 139 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 SFT2D2O95562 160 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 HOXA6P31267 233 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 ZNF83P51522 516 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 RAG2P55895 527 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 PPP1R1AQ13522 171 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 PAM16Q9Y3D7 125 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 DHHO43323 396 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 HRO43593 1189 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 OLIG3Q7RTU3 272 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 WDR13Q9H1Z4 485 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 PRDM7Q9NQW5 492 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.78□□□□□ -1.166e-7■■■■■ 32.6
NIPBL-201ENST00000282516 ITGB4P16144 1822 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 TRAV17A0A0B4J275 112 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 SS18L1O75177 396 aaPredicted RBP7.78□□□□□ -1.16
NIPBL-201ENST00000282516 FAM24BQ8N5W8 94 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 RAB1CQ92928 201 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 VN1R1Q9GZP7 353 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 ISG20L2Q9H9L3 353 aaKnown RBP7.78□□□□□ -1.16
NIPBL-201ENST00000282516 ERRFI1Q9UJM3 462 aaPredicted RBP7.78□□□□□ -1.16
NIPBL-201ENST00000282516 RTP5Q14D33 572 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 C8orf44Q96CB5 159 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 OR2W1Q9Y3N9 320 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 DOCK8Q8NF50 2099 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 ROS1P08922 2347 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 CACNA1HO95180 2353 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 DEFB103AP81534 67 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 TNFAIP6P98066 277 aaPredicted RBP7.78□□□□□ -1.16
NIPBL-201ENST00000282516 MRPL54Q6P161 138 aaKnown RBP7.78□□□□□ -1.16
NIPBL-201ENST00000282516 LRRC29Q8WV35 223 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 TRAV38-1A0A0B4J264 116 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 GAGE10A6NGK3 116 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 PDCD6O75340 191 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 FAM53BQ14153 422 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 SPANXN1Q5VSR9 72 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 FAM219AQ8IW50 185 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 CA13Q8N1Q1 262 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 OR8B3Q8NGG8 313 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 PTX4Q96A99 478 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 TM4SF19Q96DZ7 209 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 SMIM14Q96QK8 99 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 OR8B2Q96RD0 313 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 TBC1D29Q9UFV1 150 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 GPR3P46089 330 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 IER3P46695 156 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 CCR5P51681 352 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 TMEM211Q6ICI0 200 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 ZNF683Q8IZ20 524 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 TMUB1Q9BVT8 246 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 CRISPLD2Q9H0B8 497 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 RABAC1Q9UI14 185 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 SURF2Q15527 256 aaPredicted RBP7.78□□□□□ -1.16
NIPBL-201ENST00000282516 KLK11Q9UBX7 282 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 RAXQ9Y2V3 346 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 TOGARAM1Q9Y4F4 1720 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 CRYBG1Q9Y4K1 1723 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 OR5AC1P0C628 307 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 GABRA6Q16445 453 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 TMEM108Q6UXF1 575 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 ASCL5Q7RTU5 278 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 GLCCI1Q86VQ1 547 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 ELSPBP1Q96BH3 223 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 TEX37Q96LM6 180 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 DOCK5Q9H7D0 1870 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 LTB4R2Q9NPC1 389 aa7.78□□□□□ -1.16
NIPBL-201ENST00000282516 TNFSF15O95150 251 aa7.77□□□□□ -1.16
NIPBL-201ENST00000282516 TWIST1Q15672 202 aa7.77□□□□□ -1.16
NIPBL-201ENST00000282516 KISS1Q15726 138 aa7.77□□□□□ -1.16
NIPBL-201ENST00000282516 SPINK9Q5DT21 86 aa7.77□□□□□ -1.16
NIPBL-201ENST00000282516 SIGIRRQ6IA17 410 aa7.77□□□□□ -1.16
NIPBL-201ENST00000282516 LRRC3BQ96PB8 259 aa7.77□□□□□ -1.16
NIPBL-201ENST00000282516 A0A087WUJ7 227 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 C9orf170A2RU37 121 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 ZGLP1P0C6A0 271 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 DYNLT3P51808 116 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 SP6Q3SY56 376 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 OR11G2Q8NGC1 345 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 CCR2P41597 374 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 PRSS54Q6PEW0 395 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 DLK2Q6UY11 383 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 ZNF384Q8TF68 577 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 NUDT16L1Q9BRJ7 211 aaKnown RBP7.77□□□□□ -1.17
NIPBL-201ENST00000282516 ZNF385DQ9H6B1 395 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 ZMIZ1Q9ULJ6 1067 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 TRGV5A0A0B4J1U4 118 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 A0A1B0GV72 72 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 P2RY1P47900 373 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 ZXDAP98168 799 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 HERPUD1Q15011 391 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 PYCR3Q53H96 274 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 MBD3L1Q8WWY6 194 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 R3HDM4Q96D70 268 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 HIST1H4GQ99525 98 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 RSRP1Q9BUV0 290 aa7.77□□□□□ -1.17
NIPBL-201ENST00000282516 STARD10Q9Y365 291 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms