RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 COL13A1Q5TAT6 717 aaPredicted RBP17.95■□□□□ 0.46
CACNA1B-201ENST00000277549 C10orf113Q5VZT2 155 aa17.95■□□□□ 0.46
CACNA1B-201ENST00000277549 ZNF561Q8N587 486 aa17.95■□□□□ 0.46
CACNA1B-201ENST00000277549 UCN2Q96RP3 112 aa17.95■□□□□ 0.46
CACNA1B-201ENST00000277549 GPR27Q9NS67 375 aa17.95■□□□□ 0.46
CACNA1B-201ENST00000277549 RPL29P47914 159 aaKnown RBP17.95■□□□□ 0.46
CACNA1B-201ENST00000277549 ZFP36L2P47974 494 aaKnown RBP17.95■□□□□ 0.46
CACNA1B-201ENST00000277549 TMEM229BQ8NBD8 167 aa17.95■□□□□ 0.46
CACNA1B-201ENST00000277549 CCL13Q99616 98 aa17.95■□□□□ 0.46
CACNA1B-201ENST00000277549 WBP1LQ9NX94 342 aa17.95■□□□□ 0.46
CACNA1B-201ENST00000277549 TECRQ9NZ01 308 aaKnown RBP17.95■□□□□ 0.46
CACNA1B-201ENST00000277549 MFNGO00587 321 aa17.95■□□□□ 0.46
CACNA1B-201ENST00000277549 NKX2-8O15522 239 aa17.95■□□□□ 0.46
CACNA1B-201ENST00000277549 STXBP6Q8NFX7 210 aa17.95■□□□□ 0.46
CACNA1B-201ENST00000277549 P01737 135 aa17.94■□□□□ 0.46
CACNA1B-201ENST00000277549 OR4S2Q8NH73 311 aa17.94■□□□□ 0.46
CACNA1B-201ENST00000277549 MMP15P51511 669 aa17.94■□□□□ 0.46
CACNA1B-201ENST00000277549 SSX1Q16384 188 aa17.94■□□□□ 0.46
CACNA1B-201ENST00000277549 PNLIPRP3Q17RR3 467 aa17.94■□□□□ 0.46
CACNA1B-201ENST00000277549 CENPVQ7Z7K6 275 aaPredicted RBP17.94■□□□□ 0.46
CACNA1B-201ENST00000277549 FOXC2Q99958 501 aa17.94■□□□□ 0.46
CACNA1B-201ENST00000277549 C1RLQ9NZP8 487 aa17.94■□□□□ 0.46
CACNA1B-201ENST00000277549 PLPP3O14495 311 aa17.94■□□□□ 0.46
CACNA1B-201ENST00000277549 ATP5J2P56134 94 aa17.94■□□□□ 0.46
CACNA1B-201ENST00000277549 PP6455Q8WZ26 134 aa17.94■□□□□ 0.46
CACNA1B-201ENST00000277549 SYT11Q9BT88 431 aa17.94■□□□□ 0.46
CACNA1B-201ENST00000277549 GSX1Q9H4S2 264 aaPredicted RBP17.94■□□□□ 0.46
CACNA1B-201ENST00000277549 FAM60AQ9NP50 221 aa17.94■□□□□ 0.46
CACNA1B-201ENST00000277549 CACNA1SQ13698 1873 aa17.94■□□□□ 0.46
CACNA1B-201ENST00000277549 BTF3P20290 206 aaKnown RBP17.94■□□□□ 0.46
CACNA1B-201ENST00000277549 SRD5A2P31213 254 aa17.94■□□□□ 0.46
CACNA1B-201ENST00000277549 OR1L6Q8NGR2 347 aa17.94■□□□□ 0.46
CACNA1B-201ENST00000277549 NTNG2Q96CW9 530 aa17.94■□□□□ 0.46
CACNA1B-201ENST00000277549 TOPAZ1Q8N9V7 1692 aa17.94■□□□□ 0.46
CACNA1B-201ENST00000277549 OOEPA6NGQ2 149 aa17.94■□□□□ 0.46
CACNA1B-201ENST00000277549 FPR2P25090 351 aa17.94■□□□□ 0.46
CACNA1B-201ENST00000277549 RGPD5Q99666 1765 aa17.94■□□□□ 0.46
CACNA1B-201ENST00000277549 SPNP16150 400 aa17.93■□□□□ 0.46
CACNA1B-201ENST00000277549 DDOSTP39656 456 aa17.93■□□□□ 0.46
CACNA1B-201ENST00000277549 OR8B12Q8NGG6 310 aa17.93■□□□□ 0.46
CACNA1B-201ENST00000277549 OR2D3Q8NGH3 330 aa17.93■□□□□ 0.46
CACNA1B-201ENST00000277549 CCKARP32238 428 aa17.93■□□□□ 0.46
CACNA1B-201ENST00000277549 RNF165Q6ZSG1 346 aa17.93■□□□□ 0.46
CACNA1B-201ENST00000277549 KLHDC1Q8N7A1 406 aa17.93■□□□□ 0.46
CACNA1B-201ENST00000277549 MED30Q96HR3 178 aa17.93■□□□□ 0.46
CACNA1B-201ENST00000277549 NEURL2Q9BR09 285 aa17.93■□□□□ 0.46
CACNA1B-201ENST00000277549 COL8A1P27658 744 aa17.93■□□□□ 0.46
CACNA1B-201ENST00000277549 MOGAT1Q96PD6 335 aa17.93■□□□□ 0.46
CACNA1B-201ENST00000277549 A0A1B0GTL3 188 aa17.93■□□□□ 0.46
CACNA1B-201ENST00000277549 SIGLEC14Q08ET2 396 aa17.93■□□□□ 0.46
CACNA1B-201ENST00000277549 NUFIP2Q7Z417 695 aaKnown RBP17.93■□□□□ 0.46
CACNA1B-201ENST00000277549 SLC26A10Q8NG04 563 aa17.93■□□□□ 0.46
CACNA1B-201ENST00000277549 MBD1Q9UIS9 605 aaPredicted RBP17.93■□□□□ 0.46
CACNA1B-201ENST00000277549 IGHV3-23P01764 117 aa17.93■□□□□ 0.46
CACNA1B-201ENST00000277549 HIST1H1DP16402 221 aaKnown RBP17.93■□□□□ 0.46
CACNA1B-201ENST00000277549 B2MP61769 119 aa17.93■□□□□ 0.46
CACNA1B-201ENST00000277549 MOGAT2Q3SYC2 334 aa17.93■□□□□ 0.46
CACNA1B-201ENST00000277549 ATP1A1-AS1Q5TC04 95 aa17.93■□□□□ 0.46
CACNA1B-201ENST00000277549 ASCL5Q7RTU5 278 aa17.93■□□□□ 0.46
CACNA1B-201ENST00000277549 MDP1Q86V88 176 aa17.93■□□□□ 0.46
CACNA1B-201ENST00000277549 AKAP12Q02952 1782 aa17.93■□□□□ 0.46
CACNA1B-201ENST00000277549 BAP18Q8IXM2 172 aa17.92■□□□□ 0.46
CACNA1B-201ENST00000277549 DNAJB12Q9NXW2 375 aaKnown RBP17.92■□□□□ 0.46
CACNA1B-201ENST00000277549 SLC35B1P78383 322 aa17.92■□□□□ 0.46
CACNA1B-201ENST00000277549 PIGYQ3MUY2 71 aa17.92■□□□□ 0.46
CACNA1B-201ENST00000277549 ZBTB37Q5TC79 503 aa17.92■□□□□ 0.46
CACNA1B-201ENST00000277549 CBLN3Q6UW01 205 aa17.92■□□□□ 0.46
CACNA1B-201ENST00000277549 SPSB1Q96BD6 273 aa17.92■□□□□ 0.46
CACNA1B-201ENST00000277549 RASL12Q9NYN1 266 aa17.92■□□□□ 0.46
CACNA1B-201ENST00000277549 GCGP01275 180 aa17.92■□□□□ 0.46
CACNA1B-201ENST00000277549 MRPL58Q14197 206 aaKnown RBP17.92■□□□□ 0.46
CACNA1B-201ENST00000277549 MRAP2Q96G30 205 aa17.92■□□□□ 0.46
CACNA1B-201ENST00000277549 CDCA4Q9BXL8 241 aa17.92■□□□□ 0.46
CACNA1B-201ENST00000277549 WDR13Q9H1Z4 485 aa17.92■□□□□ 0.46
CACNA1B-201ENST00000277549 KIR3DL2P43630 455 aa17.92■□□□□ 0.46
CACNA1B-201ENST00000277549 POLR2GP62487 172 aaKnown RBP eCLIP17.92■□□□□ 0.46
CACNA1B-201ENST00000277549 HERPUD1Q15011 391 aa17.92■□□□□ 0.46
CACNA1B-201ENST00000277549 MYOZ3Q8TDC0 251 aa17.92■□□□□ 0.46
CACNA1B-201ENST00000277549 TBX15Q96SF7 602 aa17.92■□□□□ 0.46
CACNA1B-201ENST00000277549 MOB4Q9Y3A3 225 aa17.92■□□□□ 0.46
CACNA1B-201ENST00000277549 BCL2L11O43521 198 aa17.92■□□□□ 0.46
CACNA1B-201ENST00000277549 SS18L1O75177 396 aaPredicted RBP17.92■□□□□ 0.46
CACNA1B-201ENST00000277549 TFAP2AP05549 437 aa17.92■□□□□ 0.46
CACNA1B-201ENST00000277549 CD96P40200 585 aa17.91■□□□□ 0.46
CACNA1B-201ENST00000277549 TMEM128Q5BJH2 165 aa17.91■□□□□ 0.46
CACNA1B-201ENST00000277549 MRGPRX3Q96LB0 322 aa17.91■□□□□ 0.46
CACNA1B-201ENST00000277549 FLRT3Q9NZU0 649 aa17.91■□□□□ 0.46
CACNA1B-201ENST00000277549 CELA2AP08217 269 aa17.91■□□□□ 0.46
CACNA1B-201ENST00000277549 GLDNQ6ZMI3 551 aaPredicted RBP17.91■□□□□ 0.46
CACNA1B-201ENST00000277549 MMP24Q9Y5R2 645 aa17.91■□□□□ 0.46
CACNA1B-201ENST00000277549 CST4P01036 141 aa17.91■□□□□ 0.46
CACNA1B-201ENST00000277549 CXCL10P02778 98 aa17.91■□□□□ 0.46
CACNA1B-201ENST00000277549 FTH1P19P0C7X4 201 aa17.91■□□□□ 0.46
CACNA1B-201ENST00000277549 ZNF273Q14593 569 aa17.91■□□□□ 0.46
CACNA1B-201ENST00000277549 ZDHHC8Q9ULC8 765 aa17.91■□□□□ 0.46
CACNA1B-201ENST00000277549 RPLP1P05386 114 aaKnown RBP17.91■□□□□ 0.46
CACNA1B-201ENST00000277549 CSF2RBP32927 897 aa17.91■□□□□ 0.46
CACNA1B-201ENST00000277549 KCNJ3P48549 501 aa17.91■□□□□ 0.46
CACNA1B-201ENST00000277549 RPL24P83731 157 aaKnown RBP17.91■□□□□ 0.46
CACNA1B-201ENST00000277549 ZNF658BQ4V348 819 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms