RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 IGHV3-7P01780 117 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 ZNF883P0CG24 379 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 CPN1P15169 458 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 OR2B8PP59922 312 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 ZNF79Q15937 498 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 FAM214BQ7L5A3 538 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 TMEM105Q8N8V8 129 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 AICDAQ9GZX7 198 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 UQCC1Q9NVA1 299 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 FOXJ2Q9P0K8 574 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 TRAV38-1A0A0B4J264 116 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 UBE2L5PA0A1B0GUS4 154 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 CRYM-AS1A6NIL9 109 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 ADAP1O75689 374 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 HLXQ14774 488 aaPredicted RBP13.49□□□□□ -0.25
TIMP3-201ENST00000266085 CSRP2Q16527 193 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 APCDD1LQ8NCL9 501 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 OR5M8Q8NGP6 311 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 SMIM7Q9BQ49 75 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 NMES1Q9C002 83 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 MSL2Q9HCI7 577 aa13.49□□□□□ -0.25
TIMP3-201ENST00000266085 SLC25A4P12235 298 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 ENDOGQ14249 297 aaKnown RBP13.48□□□□□ -0.25
TIMP3-201ENST00000266085 ZNF528Q3MIS6 628 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 RAB1CQ92928 201 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 ACY3Q96HD9 319 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 K7ESF4 209 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 ACP1P24666 158 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 ROM1Q03395 351 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 FOXO1Q12778 655 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 TMEM230Q96A57 120 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 BSCL2Q96G97 398 aaPredicted RBP13.48□□□□□ -0.25
TIMP3-201ENST00000266085 KCNK17Q96T54 332 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 AMELYQ99218 206 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 RAB1BQ9H0U4 201 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 MDC1Q14676 2089 aaKnown RBP13.48□□□□□ -0.25
TIMP3-201ENST00000266085 TRDCB7Z8K6 153 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 ZNF205O95201 554 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 PRSS54Q6PEW0 395 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 OR2C3Q8N628 320 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 TREM2Q9NZC2 230 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 ONECUT1Q9UBC0 465 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 STARD10Q9Y365 291 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 LOC101059948A0A1B0GTJ6 334 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 CCL21O00585 134 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 GDF9O60383 454 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 OR2C1O95371 312 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 PSG4Q00888 419 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 ARL16Q0P5N6 197 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 CLLU1Q5K131 121 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 ZNF574Q6ZN55 896 aaPredicted RBP13.48□□□□□ -0.25
TIMP3-201ENST00000266085 BAGE3Q86Y29 109 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 BAGE2Q86Y30 109 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 FBLIM1Q8WUP2 373 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 OR2J1Q9GZK6 312 aa13.48□□□□□ -0.25
TIMP3-201ENST00000266085 DOPEY2Q9Y3R5 2298 aa13.47□□□□□ -0.25
TIMP3-201ENST00000266085 PPP1R2P9O14990 202 aa13.47□□□□□ -0.25
TIMP3-201ENST00000266085 KDF1Q8NAX2 398 aaPredicted RBP13.47□□□□□ -0.25
TIMP3-201ENST00000266085 OR5C1Q8NGR4 320 aa13.47□□□□□ -0.25
TIMP3-201ENST00000266085 HES4Q9HCC6 221 aa13.47□□□□□ -0.25
TIMP3-201ENST00000266085 TUBG2Q9NRH3 451 aa13.47□□□□□ -0.25
TIMP3-201ENST00000266085 IL36GQ9NZH8 169 aa13.47□□□□□ -0.25
TIMP3-201ENST00000266085 CYB5R1Q9UHQ9 305 aa13.47□□□□□ -0.25
TIMP3-201ENST00000266085 CHD5Q8TDI0 1954 aa13.47□□□□□ -0.25
TIMP3-201ENST00000266085 A0A0U1RQV5 110 aa13.47□□□□□ -0.25
TIMP3-201ENST00000266085 TRAF3IP2O43734 574 aaPredicted RBP13.47□□□□□ -0.25
TIMP3-201ENST00000266085 HOXD11P31277 338 aaPredicted RBP13.47□□□□□ -0.25
TIMP3-201ENST00000266085 SAP30LQ9HAJ7 183 aa13.47□□□□□ -0.25
TIMP3-201ENST00000266085 MS4A18H0YCH9 400 aa13.47□□□□□ -0.25
TIMP3-201ENST00000266085 TMPRSS2O15393 492 aa13.47□□□□□ -0.25
TIMP3-201ENST00000266085 CA11O75493 328 aa13.47□□□□□ -0.25
TIMP3-201ENST00000266085 IGF2P01344 180 aa13.47□□□□□ -0.25
TIMP3-201ENST00000266085 GZMHP20718 246 aa13.47□□□□□ -0.25
TIMP3-201ENST00000266085 EFNB2P52799 333 aa13.47□□□□□ -0.25
TIMP3-201ENST00000266085 RPS4XP62701 263 aaKnown RBP13.47□□□□□ -0.25
TIMP3-201ENST00000266085 MS4A18Q3C1V0 323 aa13.47□□□□□ -0.25
TIMP3-201ENST00000266085 ATPIF1Q9UII2 106 aa13.47□□□□□ -0.25
TIMP3-201ENST00000266085 PCDHGA9Q9Y5G4 932 aaKnown RBP13.47□□□□□ -0.25
TIMP3-201ENST00000266085 IGKV1D-42A0A075B6H8 117 aa13.46□□□□□ -0.25
TIMP3-201ENST00000266085 CYTIPO60759 359 aa13.46□□□□□ -0.25
TIMP3-201ENST00000266085 TBX6O95947 436 aaPredicted RBP13.46□□□□□ -0.25
TIMP3-201ENST00000266085 PGA4P0DJD7 388 aa13.46□□□□□ -0.25
TIMP3-201ENST00000266085 MOGAT3Q86VF5 341 aa13.46□□□□□ -0.25
TIMP3-201ENST00000266085 PTX4Q96A99 478 aa13.46□□□□□ -0.25
TIMP3-201ENST00000266085 ZNF331Q9NQX6 463 aaPredicted RBP13.46□□□□□ -0.25
TIMP3-201ENST00000266085 SNRNP200O75643 2136 aaKnown RBP13.46□□□□□ -0.25
TIMP3-201ENST00000266085 IGLV1-36A0A0B4J1U3 117 aa13.46□□□□□ -0.25
TIMP3-201ENST00000266085 TGFBR3LH3BV60 316 aa13.46□□□□□ -0.25
TIMP3-201ENST00000266085 HAND1O96004 215 aa13.46□□□□□ -0.25
TIMP3-201ENST00000266085 PPYP01298 95 aa13.46□□□□□ -0.25
TIMP3-201ENST00000266085 LINC00271P0C7V0 271 aa13.46□□□□□ -0.25
TIMP3-201ENST00000266085 BCL3P20749 454 aa13.46□□□□□ -0.25
TIMP3-201ENST00000266085 ASCL1P50553 236 aa13.46□□□□□ -0.25
TIMP3-201ENST00000266085 IL13RA2Q14627 380 aa13.46□□□□□ -0.25
TIMP3-201ENST00000266085 CLEC18BQ6UXF7 455 aa13.46□□□□□ -0.25
TIMP3-201ENST00000266085 RHOFQ9HBH0 211 aa13.46□□□□□ -0.25
TIMP3-201ENST00000266085 DIDO1Q9BTC0 2240 aaKnown RBP13.46□□□□□ -0.25
TIMP3-201ENST00000266085 MS4A5Q9H3V2 200 aa13.46□□□□□ -0.25
TIMP3-201ENST00000266085 PPP1R3EQ9H7J1 279 aa13.46□□□□□ -0.25
TIMP3-201ENST00000266085 HMSDA8MTL9 139 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms