RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 METTL1Q9UBP6 276 aaKnown RBP10.72□□□□□ -0.69
CHMP3-201ENST00000263856 TGIF2-C20orf24A0A0A6YYL0 155 aa10.71□□□□□ -0.69
CHMP3-201ENST00000263856 IGHV3-64DA0A0J9YX35 117 aa10.71□□□□□ -0.69
CHMP3-201ENST00000263856 IGHV5-10-1A0A0J9YXX1 117 aa10.71□□□□□ -0.69
CHMP3-201ENST00000263856 MPPED1O15442 326 aa10.71□□□□□ -0.69
CHMP3-201ENST00000263856 HSPA12AO43301 675 aa10.71□□□□□ -0.69
CHMP3-201ENST00000263856 CD63P08962 238 aa10.71□□□□□ -0.69
CHMP3-201ENST00000263856 SCTP09683 121 aa10.71□□□□□ -0.69
CHMP3-201ENST00000263856 RPL23AP62750 156 aaKnown RBP10.71□□□□□ -0.69
CHMP3-201ENST00000263856 ZNF266Q14584 549 aa10.71□□□□□ -0.69
CHMP3-201ENST00000263856 RHEBQ15382 184 aa10.71□□□□□ -0.69
CHMP3-201ENST00000263856 DPPA2Q7Z7J5 298 aa10.71□□□□□ -0.69
CHMP3-201ENST00000263856 KMT5CQ86Y97 462 aa10.71□□□□□ -0.69
CHMP3-201ENST00000263856 GAPTQ8N292 157 aa10.71□□□□□ -0.69
CHMP3-201ENST00000263856 C18orf12Q96KH6 178 aa10.71□□□□□ -0.69
CHMP3-201ENST00000263856 TOLLIPQ9H0E2 274 aa10.71□□□□□ -0.69
CHMP3-201ENST00000263856 CACNA1DQ01668 2161 aa10.71□□□□□ -0.69
CHMP3-201ENST00000263856 TERTO14746 1132 aaKnown RBP10.71□□□□□ -0.69
CHMP3-201ENST00000263856 SRFP11831 508 aa10.71□□□□□ -0.69
CHMP3-201ENST00000263856 ALDH3B1P43353 468 aa10.71□□□□□ -0.69
CHMP3-201ENST00000263856 FGF8P55075 233 aaPredicted RBP10.71□□□□□ -0.69
CHMP3-201ENST00000263856 RAB11AP62491 216 aa10.71□□□□□ -0.69
CHMP3-201ENST00000263856 DLK1P80370 383 aa10.71□□□□□ -0.69
CHMP3-201ENST00000263856 ZNF429Q86V71 674 aa10.71□□□□□ -0.69
CHMP3-201ENST00000263856 EXTL1Q92935 676 aa10.71□□□□□ -0.69
CHMP3-201ENST00000263856 S100PBPQ96BU1 408 aa10.71□□□□□ -0.69
CHMP3-201ENST00000263856 TRAV39A0A0B4J263 110 aa10.71□□□□□ -0.7
CHMP3-201ENST00000263856 ZNF587BE7ETH6 402 aa10.71□□□□□ -0.7
CHMP3-201ENST00000263856 PDCD6O75340 191 aa10.71□□□□□ -0.7
CHMP3-201ENST00000263856 NDUFS6O75380 124 aaKnown RBP10.71□□□□□ -0.7
CHMP3-201ENST00000263856 S100PP25815 95 aa10.71□□□□□ -0.7
CHMP3-201ENST00000263856 NTF4P34130 210 aa10.71□□□□□ -0.7
CHMP3-201ENST00000263856 SLC23A3Q6PIS1 610 aa10.71□□□□□ -0.7
CHMP3-201ENST00000263856 LCN15Q6UWW0 184 aa10.71□□□□□ -0.7
CHMP3-201ENST00000263856 LHFPL2Q6ZUX7 228 aa10.71□□□□□ -0.7
CHMP3-201ENST00000263856 CMTM1Q8IZ96 169 aa10.71□□□□□ -0.7
CHMP3-201ENST00000263856 OR10D4PQ8NGN7 298 aa10.71□□□□□ -0.7
CHMP3-201ENST00000263856 HPSE2Q8WWQ2 592 aa10.71□□□□□ -0.7
CHMP3-201ENST00000263856 OR51M1Q9H341 326 aa10.71□□□□□ -0.7
CHMP3-201ENST00000263856 CCL28Q9NRJ3 127 aa10.71□□□□□ -0.7
CHMP3-201ENST00000263856 RBM7Q9Y580 266 aaKnown RBP10.71□□□□□ -0.7
CHMP3-201ENST00000263856 IGLV3-12A0A075B6K2 115 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 A0A0G2JMM0 328 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 A0A1W2PPB8 328 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 A0A1W2PRS3 328 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 KIR3DP1A8MWS1 328 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 K7N7A8 449 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 CXCL1P09341 107 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 HAAOP46952 286 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 RAB5CP51148 216 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 PSG4Q00888 419 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 RAB35Q15286 201 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 ZNF239Q16600 458 aaKnown RBP10.7□□□□□ -0.7
CHMP3-201ENST00000263856 CLEC12BQ2HXU8 276 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 THNSL2Q86YJ6 484 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 COMMD1Q8N668 190 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 TMEM252Q8N6L7 170 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 MOB3AQ96BX8 217 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 GALNT14Q96FL9 552 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 GGACTQ9BVM4 153 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 SCRT1Q9BWW7 348 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 EGLN1Q9GZT9 426 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 ZNF576Q9H609 170 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 GLRX2Q9NS18 164 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 FAM86C1Q9NVL1 165 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 TMED3Q9Y3Q3 217 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 WSB1Q9Y6I7 421 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 CEP192Q8TEP8 1941 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 HS3ST1O14792 307 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 CHST1O43916 411 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 IGLV3-1P01715 115 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 DTYMKP23919 212 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 SSR4P51571 173 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 GPM6AP51674 278 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 CARD18P57730 90 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 IGFBP7Q16270 282 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 GFI1BQ5VTD9 330 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 ZNF818PQ6ZRF7 136 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 ZIC4Q8N9L1 334 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 CADM4Q8NFZ8 388 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 LYPD6BQ8NI32 183 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 TMEM54Q969K7 222 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 HS3ST6Q96QI5 342 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 DOCK11Q5JSL3 2073 aa10.7□□□□□ -0.7
CHMP3-201ENST00000263856 TK1P04183 234 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 IAPPP10997 89 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 LIFP15018 202 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 BCL3P20749 454 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 TUBG1P23258 451 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 WIPI1Q5MNZ9 446 aaPredicted RBP10.69□□□□□ -0.7
CHMP3-201ENST00000263856 C10orf128Q5T292 105 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 Q6ZPA2 131 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 FADS6Q8N9I5 356 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 Q8WTZ3 238 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 EDARADDQ8WWZ3 215 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 RDH5Q92781 318 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 RHOVQ96L33 236 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 FOXB1Q99853 325 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 NIPSNAP3BQ9BS92 247 aa10.69□□□□□ -0.7
CHMP3-201ENST00000263856 DOK5Q9P104 306 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms