RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 TCN2P20062 427 aa10.97□□□□□ -0.65
LIG1-201ENST00000263274 SNCAP37840 140 aa10.97□□□□□ -0.65
LIG1-201ENST00000263274 DSCR4P56555 118 aaPredicted RBP10.97□□□□□ -0.65
LIG1-201ENST00000263274 ZNF383Q8NA42 475 aa10.97□□□□□ -0.65
LIG1-201ENST00000263274 IL1F10Q8WWZ1 152 aa10.97□□□□□ -0.65
LIG1-201ENST00000263274 NABP1Q96AH0 204 aa10.97□□□□□ -0.65
LIG1-201ENST00000263274 TOLLIPQ9H0E2 274 aa10.97□□□□□ -0.65
LIG1-201ENST00000263274 IGKV1-12A0A0C4DH73 117 aa10.96□□□□□ -0.65
LIG1-201ENST00000263274 ZNF727A8MUV8 499 aa10.96□□□□□ -0.65
LIG1-201ENST00000263274 YIF1AO95070 293 aa10.96□□□□□ -0.65
LIG1-201ENST00000263274 IGKV1D-12P01611 117 aa10.96□□□□□ -0.65
LIG1-201ENST00000263274 ECI1P42126 302 aa10.96□□□□□ -0.65
LIG1-201ENST00000263274 FAM3AP98173 230 aa10.96□□□□□ -0.65
LIG1-201ENST00000263274 IL15RAQ13261 267 aa10.96□□□□□ -0.65
LIG1-201ENST00000263274 PDZD11Q5EBL8 140 aa10.96□□□□□ -0.65
LIG1-201ENST00000263274 LYSMD4Q5XG99 296 aa10.96□□□□□ -0.65
LIG1-201ENST00000263274 CCDC71LQ8N9Z2 235 aa10.96□□□□□ -0.65
LIG1-201ENST00000263274 POM121Q96HA1 1249 aa10.96□□□□□ -0.65
LIG1-201ENST00000263274 ZNF845Q96IR2 970 aaPredicted RBP10.96□□□□□ -0.65
LIG1-201ENST00000263274 TP53RKQ96S44 253 aa10.96□□□□□ -0.65
LIG1-201ENST00000263274 TM2D1Q9BX74 207 aa10.96□□□□□ -0.65
LIG1-201ENST00000263274 CXorf65A6NEN9 183 aa10.96□□□□□ -0.66
LIG1-201ENST00000263274 ATXN7O15265 892 aaPredicted RBP10.96□□□□□ -0.66
LIG1-201ENST00000263274 ZIC3O60481 467 aa10.96□□□□□ -0.66
LIG1-201ENST00000263274 LYL1P12980 280 aa10.96□□□□□ -0.66
LIG1-201ENST00000263274 LIFP15018 202 aa10.96□□□□□ -0.66
LIG1-201ENST00000263274 TMEM11P17152 192 aa10.96□□□□□ -0.66
LIG1-201ENST00000263274 RUNX1Q01196 453 aa10.96□□□□□ -0.66
LIG1-201ENST00000263274 CRIP3Q6Q6R5 217 aa10.96□□□□□ -0.66
LIG1-201ENST00000263274 ZNF611Q8N823 705 aa10.96□□□□□ -0.66
LIG1-201ENST00000263274 UBAC2Q8NBM4 344 aa10.96□□□□□ -0.66
LIG1-201ENST00000263274 ADPRHL1Q8NDY3 354 aa10.96□□□□□ -0.66
LIG1-201ENST00000263274 FGFBP3Q8TAT2 258 aa10.96□□□□□ -0.66
LIG1-201ENST00000263274 NAT6Q93015 286 aa10.96□□□□□ -0.66
LIG1-201ENST00000263274 SPSB1Q96BD6 273 aa10.96□□□□□ -0.66
LIG1-201ENST00000263274 PRO1933Q9H354 126 aa10.96□□□□□ -0.66
LIG1-201ENST00000263274 ANAPC10Q9UM13 185 aa10.96□□□□□ -0.66
LIG1-201ENST00000263274 SULT1A1P50225 295 aa10.96□□□□□ -0.66
LIG1-201ENST00000263274 TLE1Q04724 770 aa10.96□□□□□ -0.66
LIG1-201ENST00000263274 KCNMB1Q16558 191 aa10.96□□□□□ -0.66
LIG1-201ENST00000263274 HIST3H3Q16695 136 aa10.96□□□□□ -0.66
LIG1-201ENST00000263274 HLA-BQ31612 363 aa10.96□□□□□ -0.66
LIG1-201ENST00000263274 CXorf66Q5JRM2 361 aaPredicted RBP10.96□□□□□ -0.66
LIG1-201ENST00000263274 CALHM1Q8IU99 346 aa10.96□□□□□ -0.66
LIG1-201ENST00000263274 OR51H1Q8NH63 302 aa10.96□□□□□ -0.66
LIG1-201ENST00000263274 FOXB1Q99853 325 aa10.96□□□□□ -0.66
LIG1-201ENST00000263274 A0A0G2JMM0 328 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 A0A1W2PPB8 328 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 A0A1W2PRS3 328 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 KIR3DP1A8MWS1 328 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 OR2C1O95371 312 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 GDF1P27539 372 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 CHATP28329 748 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 PSG4Q00888 419 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 PCOLCEQ15113 449 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 LPAL2Q16609 132 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 C10orf91Q5T1B1 145 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 DBX2Q6ZNG2 339 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 VASH2Q86V25 355 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 C15orf54Q8N8G6 183 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 IFI44Q8TCB0 444 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 RHBDD1Q8TEB9 315 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 ABHD3Q8WU67 409 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 TMEM68Q96MH6 324 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 DUSP23Q9BVJ7 150 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 SLC7A10Q9NS82 523 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 DMRT1Q9Y5R6 373 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 H7C1Q1 480 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 HS3ST1O14792 307 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 ADAM20O43506 726 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 MT-ND4LP03901 98 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 GAPDHP04406 335 aaKnown RBP10.95□□□□□ -0.66
LIG1-201ENST00000263274 EPHA8P29322 1005 aaPredicted RBP10.95□□□□□ -0.66
LIG1-201ENST00000263274 EWSR1Q01844 656 aaKnown RBP eCLIP10.95□□□□□ -0.66
LIG1-201ENST00000263274 RAB35Q15286 201 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 FAM27BQ5VT28 67 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 NSUN5P2Q63ZY6 315 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 OR2C3Q8N628 320 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 ZIC4Q8N9L1 334 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 DMBX1Q8NFW5 382 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 SUCNR1Q9BXA5 334 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 PRRG4Q9BZD6 226 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 TMPRSS5Q9H3S3 457 aa10.95□□□□□ -0.66
LIG1-201ENST00000263274 C3orf85A0A1B0GTC6 90 aa10.94□□□□□ -0.66
LIG1-201ENST00000263274 PPYP01298 95 aa10.94□□□□□ -0.66
LIG1-201ENST00000263274 TK1P04183 234 aa10.94□□□□□ -0.66
LIG1-201ENST00000263274 NTF4P34130 210 aa10.94□□□□□ -0.66
LIG1-201ENST00000263274 P2RY1P47900 373 aa10.94□□□□□ -0.66
LIG1-201ENST00000263274 GPM6AP51674 278 aa10.94□□□□□ -0.66
LIG1-201ENST00000263274 IZUMO4Q1ZYL8 232 aa10.94□□□□□ -0.66
LIG1-201ENST00000263274 ZNF674Q2M3X9 581 aa10.94□□□□□ -0.66
LIG1-201ENST00000263274 CDPF1Q6NVV7 123 aa10.94□□□□□ -0.66
LIG1-201ENST00000263274 LHFPL2Q6ZUX7 228 aa10.94□□□□□ -0.66
LIG1-201ENST00000263274 SPEM1Q8N4L4 309 aa10.94□□□□□ -0.66
LIG1-201ENST00000263274 FADS6Q8N9I5 356 aa10.94□□□□□ -0.66
LIG1-201ENST00000263274 OR5C1Q8NGR4 320 aa10.94□□□□□ -0.66
LIG1-201ENST00000263274 RDH5Q92781 318 aa10.94□□□□□ -0.66
LIG1-201ENST00000263274 TRAV39A0A0B4J263 110 aa10.94□□□□□ -0.66
LIG1-201ENST00000263274 HSPA12AO43301 675 aa10.94□□□□□ -0.66
LIG1-201ENST00000263274 PDCD6O75340 191 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms