RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 REPIN1Q9BWE0 567 aaKnown RBP3.63□□□□□ -1.83
UBE4A-201ENST00000252108 ACTR3CQ9C0K3 210 aaPredicted RBP3.63□□□□□ -1.83
UBE4A-201ENST00000252108 Q9N2K0 584 aa3.63□□□□□ -1.83
UBE4A-201ENST00000252108 MANBALQ9NQG1 85 aa3.63□□□□□ -1.83
UBE4A-201ENST00000252108 KCNIP1Q9NZI2 227 aa3.63□□□□□ -1.83
UBE4A-201ENST00000252108 NAT8Q9UHE5 227 aa3.63□□□□□ -1.83
UBE4A-201ENST00000252108 R4GN57 208 aa3.63□□□□□ -1.83
UBE4A-201ENST00000252108 BRWD1Q9NSI6 2320 aa3.63□□□□□ -1.83
UBE4A-201ENST00000252108 LIPT2A6NK58 231 aa3.63□□□□□ -1.83
UBE4A-201ENST00000252108 F5H5K5 113 aa3.63□□□□□ -1.83
UBE4A-201ENST00000252108 MS4A18H0YCH9 400 aa3.63□□□□□ -1.83
UBE4A-201ENST00000252108 M0QZ24 198 aa3.63□□□□□ -1.83
UBE4A-201ENST00000252108 ACAA1P09110 424 aaPredicted RBP3.63□□□□□ -1.83
UBE4A-201ENST00000252108 CBR1P16152 277 aa3.63□□□□□ -1.83
UBE4A-201ENST00000252108 VDAC1P21796 283 aa3.63□□□□□ -1.83
UBE4A-201ENST00000252108 GLRA1P23415 457 aa3.63□□□□□ -1.83
UBE4A-201ENST00000252108 HABP2Q14520 560 aaPredicted RBP3.63□□□□□ -1.83
UBE4A-201ENST00000252108 MS4A18Q3C1V0 323 aa3.63□□□□□ -1.83
UBE4A-201ENST00000252108 TMEM176BQ3YBM2 270 aaPredicted RBP3.63□□□□□ -1.83
UBE4A-201ENST00000252108 ACSF3Q4G176 576 aaPredicted RBP3.63□□□□□ -1.83
UBE4A-201ENST00000252108 ZNF506Q5JVG8 444 aa3.63□□□□□ -1.83
UBE4A-201ENST00000252108 ZNF787Q6DD87 383 aa3.63□□□□□ -1.83
UBE4A-201ENST00000252108 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.63□□□□□ -1.83
UBE4A-201ENST00000252108 MRGPRGQ86SM5 289 aa3.63□□□□□ -1.83
UBE4A-201ENST00000252108 LHFPL1Q86WI0 220 aa3.63□□□□□ -1.83
UBE4A-201ENST00000252108 ARL6IP6Q8N6S5 226 aa3.63□□□□□ -1.83
UBE4A-201ENST00000252108 OR13G1Q8NGZ3 307 aa3.63□□□□□ -1.83
UBE4A-201ENST00000252108 FER1L6-AS2Q96M78 137 aa3.63□□□□□ -1.83
UBE4A-201ENST00000252108 DUSP15Q9H1R2 295 aaPredicted RBP3.63□□□□□ -1.83
UBE4A-201ENST00000252108 CYTL1Q9NRR1 136 aa3.63□□□□□ -1.83
UBE4A-201ENST00000252108 OR5AC2Q9NZP5 309 aa3.63□□□□□ -1.83
UBE4A-201ENST00000252108 LINC01387J3KSC0 135 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 CYB5R3P00387 301 aaPredicted RBP3.62□□□□□ -1.83
UBE4A-201ENST00000252108 QDPRP09417 244 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 SLC25A6P12236 298 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 ZNF708P17019 499 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 CD38P28907 300 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 GCH1P30793 250 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 RND3P61587 244 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 RAB31Q13636 194 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 FAM162BQ5T6X4 162 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 NCR3LG1Q68D85 454 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 ZNF600Q6ZNG1 722 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 FAM89BQ8N5H3 189 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 TEX29Q8N6K0 151 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 OR5L1Q8NGL2 311 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 OR51F2Q8NH61 342 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 OR5R1Q8NH85 324 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 POC1BQ8TC44 478 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 GMPPAQ96IJ6 420 aaPredicted RBP3.62□□□□□ -1.83
UBE4A-201ENST00000252108 CYYR1Q96J86 154 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 MESP1Q9BRJ9 268 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 LIN7CQ9NUP9 197 aaKnown RBP3.62□□□□□ -1.83
UBE4A-201ENST00000252108 IGKV1D-43A0A0B4J1Z2 117 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 METTL12A8MUP2 240 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 ZNF727A8MUV8 499 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 TRDCB7Z8K6 153 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 TRAPPC2LH3BP13 241 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 M0R296 226 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 DHHO43323 396 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 FAM157CP0CG43 387 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 ERV3-1Q14264 604 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 EXT1Q16394 746 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 RSPO1Q2MKA7 263 aaPredicted RBP3.62□□□□□ -1.83
UBE4A-201ENST00000252108 CARD17Q5XLA6 110 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 METTL27Q8N6F8 245 aaPredicted RBP3.62□□□□□ -1.83
UBE4A-201ENST00000252108 TMEM104Q8NE00 496 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 OR8B12Q8NGG6 310 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 OR10D4PQ8NGN7 298 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 PPP1R35Q8TAP8 253 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 NINJ1Q92982 152 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 MRPL24Q96A35 216 aaKnown RBP3.62□□□□□ -1.83
UBE4A-201ENST00000252108 PIGQQ9BRB3 760 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 SF3B5Q9BWJ5 86 aaKnown RBP3.62□□□□□ -1.83
UBE4A-201ENST00000252108 OR51I2Q9H344 312 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 VAX2Q9UIW0 290 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 CACNA1EQ15878 2313 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 PTPRBP23467 1997 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 ZNF816-ZNF321PA0A0X1KG74 233 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 A0A1B0GU03 582 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 OR2W5A6NFC9 320 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 H3BQ15 152 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 SDCBPO00560 298 aaPredicted RBP3.62□□□□□ -1.83
UBE4A-201ENST00000252108 RAC2P15153 192 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 CTSSP25774 331 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 CD27P26842 260 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 CLDN17P56750 224 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 RNF4P78317 190 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 EWSR1Q01844 656 aaKnown RBP eCLIP3.62□□□□□ -1.83
UBE4A-201ENST00000252108 MZT1Q08AG7 82 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 SRSF7Q16629 238 aaKnown RBP eCLIP3.62□□□□□ -1.83
UBE4A-201ENST00000252108 PLCXD3Q63HM9 321 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 TGIF2LYQ8IUE0 185 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 MRPL41Q8IXM3 137 aaKnown RBP3.62□□□□□ -1.83
UBE4A-201ENST00000252108 OR10A7Q8NGE5 316 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 OR4A4PQ8NGN8 299 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 RBM24Q9BX46 236 aaKnown RBP3.62□□□□□ -1.83
UBE4A-201ENST00000252108 CALHM2Q9HA72 323 aa3.62□□□□□ -1.83
UBE4A-201ENST00000252108 SEBOXQ9HB31 216 aaPredicted RBP3.62□□□□□ -1.83
UBE4A-201ENST00000252108 TCFL5Q9UL49 500 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms