RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 IAH1Q2TAA2 248 aaPredicted RBP13.57□□□□□ -0.24
LRFN1-201ENST00000248668 RXFP4Q8TDU9 374 aa13.57□□□□□ -0.24
LRFN1-201ENST00000248668 HPSE2Q8WWQ2 592 aa13.57□□□□□ -0.24
LRFN1-201ENST00000248668 EDARADDQ8WWZ3 215 aa13.57□□□□□ -0.24
LRFN1-201ENST00000248668 NMES1Q9C002 83 aa13.57□□□□□ -0.24
LRFN1-201ENST00000248668 PRDM14Q9GZV8 571 aa13.57□□□□□ -0.24
LRFN1-201ENST00000248668 SPRR3Q9UBC9 169 aa13.57□□□□□ -0.24
LRFN1-201ENST00000248668 ZNF732B4DXR9 585 aa13.56□□□□□ -0.24
LRFN1-201ENST00000248668 CD46P15529 392 aa13.56□□□□□ -0.24
LRFN1-201ENST00000248668 RBM11P57052 281 aaKnown RBP13.56□□□□□ -0.24
LRFN1-201ENST00000248668 CLEC9AQ6UXN8 241 aa13.56□□□□□ -0.24
LRFN1-201ENST00000248668 SGPP2Q8IWX5 399 aa13.56□□□□□ -0.24
LRFN1-201ENST00000248668 EIF4E3Q8N5X7 224 aaKnown RBP13.56□□□□□ -0.24
LRFN1-201ENST00000248668 MRPL24Q96A35 216 aaKnown RBP13.56□□□□□ -0.24
LRFN1-201ENST00000248668 SPOCK3Q9BQ16 436 aa13.56□□□□□ -0.24
LRFN1-201ENST00000248668 RASL12Q9NYN1 266 aa13.56□□□□□ -0.24
LRFN1-201ENST00000248668 ADCYAP1P18509 176 aa13.56□□□□□ -0.24
LRFN1-201ENST00000248668 CALCRP30988 508 aa13.56□□□□□ -0.24
LRFN1-201ENST00000248668 DEFA6Q01524 100 aa13.56□□□□□ -0.24
LRFN1-201ENST00000248668 ABCA11PQ4W5N1 156 aa13.56□□□□□ -0.24
LRFN1-201ENST00000248668 ZNF766Q5HY98 468 aa13.56□□□□□ -0.24
LRFN1-201ENST00000248668 MDS2Q8NDY4 140 aa13.56□□□□□ -0.24
LRFN1-201ENST00000248668 TMED6Q8WW62 240 aa13.56□□□□□ -0.24
LRFN1-201ENST00000248668 NECAP2Q9NVZ3 263 aa13.56□□□□□ -0.24
LRFN1-201ENST00000248668 PDCD6O75340 191 aa13.55□□□□□ -0.24
LRFN1-201ENST00000248668 SNTB1Q13884 538 aaKnown RBP13.55□□□□□ -0.24
LRFN1-201ENST00000248668 RBM39Q14498 530 aaKnown RBP13.55□□□□□ -0.24
LRFN1-201ENST00000248668 SSX9Q7RTT3 188 aa13.55□□□□□ -0.24
LRFN1-201ENST00000248668 ZNF251Q9BRH9 671 aa13.55□□□□□ -0.24
LRFN1-201ENST00000248668 ASF1BQ9NVP2 202 aa13.55□□□□□ -0.24
LRFN1-201ENST00000248668 LSM5Q9Y4Y9 91 aaKnown RBP13.55□□□□□ -0.24
LRFN1-201ENST00000248668 ESPL1Q14674 2120 aa13.55□□□□□ -0.24
LRFN1-201ENST00000248668 SYNGR1O43759 233 aa13.55□□□□□ -0.24
LRFN1-201ENST00000248668 ZNF728P0DKX0 622 aa13.55□□□□□ -0.24
LRFN1-201ENST00000248668 NPBWR1P48145 328 aa13.55□□□□□ -0.24
LRFN1-201ENST00000248668 ZNF585AQ6P3V2 769 aa13.55□□□□□ -0.24
LRFN1-201ENST00000248668 REPIN1Q9BWE0 567 aaKnown RBP13.55□□□□□ -0.24
LRFN1-201ENST00000248668 H2AFB1P0C5Y9 115 aa13.55□□□□□ -0.24
LRFN1-201ENST00000248668 OR5AC1P0C628 307 aa13.55□□□□□ -0.24
LRFN1-201ENST00000248668 CYCSP99999 105 aaKnown RBP13.55□□□□□ -0.24
LRFN1-201ENST00000248668 PLP2Q04941 152 aa13.55□□□□□ -0.24
LRFN1-201ENST00000248668 DAZAP2Q15038 168 aaPredicted RBP13.55□□□□□ -0.24
LRFN1-201ENST00000248668 TSC22D1Q15714 1073 aa13.55□□□□□ -0.24
LRFN1-201ENST00000248668 C17orf78Q8N4C9 275 aa13.55□□□□□ -0.24
LRFN1-201ENST00000248668 OR1S2Q8NGQ3 325 aa13.55□□□□□ -0.24
LRFN1-201ENST00000248668 C2orf50Q96LR7 162 aa13.55□□□□□ -0.24
LRFN1-201ENST00000248668 SMIM3Q9BZL3 60 aa13.55□□□□□ -0.24
LRFN1-201ENST00000248668 LINC00470Q9BZP3 86 aa13.55□□□□□ -0.24
LRFN1-201ENST00000248668 ZNF391Q9UJN7 358 aa13.55□□□□□ -0.24
LRFN1-201ENST00000248668 SRSF3P84103 164 aaKnown RBP13.54□□□□□ -0.24
LRFN1-201ENST00000248668 RTL6Q6ICC9 239 aa13.54□□□□□ -0.24
LRFN1-201ENST00000248668 OR2T2Q6IF00 324 aa13.54□□□□□ -0.24
LRFN1-201ENST00000248668 SPSB4Q96A44 273 aa13.54□□□□□ -0.24
LRFN1-201ENST00000248668 HSF4Q9ULV5 492 aa13.54□□□□□ -0.24
LRFN1-201ENST00000248668 APC2O95996 2303 aa13.54□□□□□ -0.24
LRFN1-201ENST00000248668 TRGV5A0A0B4J1U4 118 aa13.54□□□□□ -0.24
LRFN1-201ENST00000248668 COLCA1Q6ZS62 124 aa13.54□□□□□ -0.24
LRFN1-201ENST00000248668 DMRTC2Q8IXT2 367 aaPredicted RBP13.54□□□□□ -0.24
LRFN1-201ENST00000248668 RTN4IP1Q8WWV3 396 aaPredicted RBP13.54□□□□□ -0.24
LRFN1-201ENST00000248668 PIK3IP1Q96FE7 263 aa13.54□□□□□ -0.24
LRFN1-201ENST00000248668 MEX3AA1L020 520 aaKnown RBP13.54□□□□□ -0.24
LRFN1-201ENST00000248668 IL18BPO95998 194 aa13.54□□□□□ -0.24
LRFN1-201ENST00000248668 AKR1C3P42330 323 aa13.54□□□□□ -0.24
LRFN1-201ENST00000248668 BLOC1S1P78537 153 aa13.54□□□□□ -0.24
LRFN1-201ENST00000248668 AVPI1Q5T686 147 aa13.54□□□□□ -0.24
LRFN1-201ENST00000248668 OR2A2Q6IF42 318 aa13.54□□□□□ -0.24
LRFN1-201ENST00000248668 ZDHHC23Q8IYP9 409 aa13.54□□□□□ -0.24
LRFN1-201ENST00000248668 POC1AQ8NBT0 407 aa13.54□□□□□ -0.24
LRFN1-201ENST00000248668 EXTL1Q92935 676 aa13.54□□□□□ -0.24
LRFN1-201ENST00000248668 APOBEC3DQ96AK3 386 aaPredicted RBP13.54□□□□□ -0.24
LRFN1-201ENST00000248668 ZNF286AQ9HBT8 521 aa13.54□□□□□ -0.24
LRFN1-201ENST00000248668 C1orf123Q9NWV4 160 aa13.54□□□□□ -0.24
LRFN1-201ENST00000248668 SLC22A20A6NK97 555 aa13.53□□□□□ -0.24
LRFN1-201ENST00000248668 DIRAS3O95661 229 aa13.53□□□□□ -0.24
LRFN1-201ENST00000248668 CELA3BP08861 270 aa13.53□□□□□ -0.24
LRFN1-201ENST00000248668 FUT3P21217 361 aa13.53□□□□□ -0.24
LRFN1-201ENST00000248668 WNT5AP41221 380 aa13.53□□□□□ -0.24
LRFN1-201ENST00000248668 CLN3Q13286 438 aa13.53□□□□□ -0.24
LRFN1-201ENST00000248668 PPA1Q15181 289 aa13.53□□□□□ -0.24
LRFN1-201ENST00000248668 KIAA2026Q5HYC2 2103 aa13.53□□□□□ -0.24
LRFN1-201ENST00000248668 GGNBP1Q5YKI7 109 aa13.53□□□□□ -0.24
LRFN1-201ENST00000248668 ASCL4Q6XD76 172 aa13.53□□□□□ -0.24
LRFN1-201ENST00000248668 MEGF10Q96KG7 1140 aa13.53□□□□□ -0.24
LRFN1-201ENST00000248668 POM121L2Q96KW2 1035 aa13.53□□□□□ -0.24
LRFN1-201ENST00000248668 SLC25A32Q9H2D1 315 aa13.53□□□□□ -0.24
LRFN1-201ENST00000248668 MTCH1Q9NZJ7 389 aa13.53□□□□□ -0.24
LRFN1-201ENST00000248668 PCDHB10Q9UN67 800 aa13.53□□□□□ -0.24
LRFN1-201ENST00000248668 AADACP22760 399 aa13.53□□□□□ -0.24
LRFN1-201ENST00000248668 SSTP61278 116 aa13.53□□□□□ -0.24
LRFN1-201ENST00000248668 MEX3BQ6ZN04 569 aaKnown RBP13.53□□□□□ -0.24
LRFN1-201ENST00000248668 MDP1Q86V88 176 aa13.53□□□□□ -0.24
LRFN1-201ENST00000248668 MYPOPQ86VE0 399 aaPredicted RBP13.53□□□□□ -0.24
LRFN1-201ENST00000248668 SPAG16Q8N0X2 631 aa13.53□□□□□ -0.24
LRFN1-201ENST00000248668 SVBPQ8N300 66 aa13.53□□□□□ -0.24
LRFN1-201ENST00000248668 TLNRD1Q9H1K6 362 aa13.53□□□□□ -0.24
LRFN1-201ENST00000248668 CD300LBA8K4G0 201 aa13.52□□□□□ -0.24
LRFN1-201ENST00000248668 CTSDP07339 412 aaPredicted RBP13.52□□□□□ -0.24
LRFN1-201ENST00000248668 G0S2P27469 103 aa13.52□□□□□ -0.24
LRFN1-201ENST00000248668 APLNRP35414 380 aa13.52□□□□□ -0.24
LRFN1-201ENST00000248668 PRSS54Q6PEW0 395 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms