RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 ZNF92Q03936 586 aa14.61□□□□□ -0.07
SGPP1-201ENST00000247225 PYY3Q5JQD4 70 aa14.61□□□□□ -0.07
SGPP1-201ENST00000247225 FGFBP3Q8TAT2 258 aa14.61□□□□□ -0.07
SGPP1-201ENST00000247225 MEGF10Q96KG7 1140 aa14.61□□□□□ -0.07
SGPP1-201ENST00000247225 HS3ST6Q96QI5 342 aa14.61□□□□□ -0.07
SGPP1-201ENST00000247225 RSG1Q9BU20 258 aa14.61□□□□□ -0.07
SGPP1-201ENST00000247225 CCL28Q9NRJ3 127 aa14.61□□□□□ -0.07
SGPP1-201ENST00000247225 ROS1P08922 2347 aa14.61□□□□□ -0.07
SGPP1-201ENST00000247225 A0A0J9YW62 118 aa14.61□□□□□ -0.07
SGPP1-201ENST00000247225 TP53I11O14683 189 aa14.61□□□□□ -0.07
SGPP1-201ENST00000247225 BCAT2O15382 392 aaPredicted RBP14.61□□□□□ -0.07
SGPP1-201ENST00000247225 SCAF4O95104 1147 aaKnown RBP14.61□□□□□ -0.07
SGPP1-201ENST00000247225 KLK3P07288 261 aaPredicted RBP14.61□□□□□ -0.07
SGPP1-201ENST00000247225 RNF224P0DH78 156 aa14.61□□□□□ -0.07
SGPP1-201ENST00000247225 LYL1P12980 280 aa14.61□□□□□ -0.07
SGPP1-201ENST00000247225 RAB5CP51148 216 aa14.61□□□□□ -0.07
SGPP1-201ENST00000247225 CCL7P80098 99 aa14.61□□□□□ -0.07
SGPP1-201ENST00000247225 CRIP3Q6Q6R5 217 aa14.61□□□□□ -0.07
SGPP1-201ENST00000247225 MAML2Q8IZL2 1156 aaPredicted RBP14.61□□□□□ -0.07
SGPP1-201ENST00000247225 DMBX1Q8NFW5 382 aa14.61□□□□□ -0.07
SGPP1-201ENST00000247225 Q8WTZ3 238 aa14.61□□□□□ -0.07
SGPP1-201ENST00000247225 TMEM171Q8WVE6 324 aa14.61□□□□□ -0.07
SGPP1-201ENST00000247225 INTS12Q96CB8 462 aaKnown RBP14.61□□□□□ -0.07
SGPP1-201ENST00000247225 NIPSNAP3BQ9BS92 247 aa14.61□□□□□ -0.07
SGPP1-201ENST00000247225 TPRP12270 2363 aaKnown RBP14.61□□□□□ -0.07
SGPP1-201ENST00000247225 ZNF133P52736 654 aaPredicted RBP14.61□□□□□ -0.07
SGPP1-201ENST00000247225 NXPH1P58417 271 aa14.61□□□□□ -0.07
SGPP1-201ENST00000247225 TESK1Q15569 626 aa14.61□□□□□ -0.07
SGPP1-201ENST00000247225 GAR1Q9NY12 217 aaKnown RBP14.61□□□□□ -0.07
SGPP1-201ENST00000247225 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.6□□□□□ -0.07
SGPP1-201ENST00000247225 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.6□□□□□ -0.07
SGPP1-201ENST00000247225 PPYP01298 95 aa14.6□□□□□ -0.07
SGPP1-201ENST00000247225 PTGDSP41222 190 aa14.6□□□□□ -0.07
SGPP1-201ENST00000247225 CEACAM16Q2WEN9 425 aa14.6□□□□□ -0.07
SGPP1-201ENST00000247225 RHBDD2Q6NTF9 364 aa14.6□□□□□ -0.07
SGPP1-201ENST00000247225 LRP11Q86VZ4 500 aa14.6□□□□□ -0.07
SGPP1-201ENST00000247225 OR1K1Q8NGR3 316 aa14.6□□□□□ -0.07
SGPP1-201ENST00000247225 LRFN1Q9P244 771 aa14.6□□□□□ -0.07
SGPP1-201ENST00000247225 METTL1Q9UBP6 276 aaKnown RBP14.6□□□□□ -0.07
SGPP1-201ENST00000247225 FBLN5Q9UBX5 448 aa14.6□□□□□ -0.07
SGPP1-201ENST00000247225 MUC3AQ02505 3323 aa14.6□□□□□ -0.07
SGPP1-201ENST00000247225 HAAOP46952 286 aa14.6□□□□□ -0.07
SGPP1-201ENST00000247225 ERVFRD-1P60508 538 aa14.6□□□□□ -0.07
SGPP1-201ENST00000247225 SYT13Q7L8C5 426 aa14.6□□□□□ -0.07
SGPP1-201ENST00000247225 ZNF611Q8N823 705 aa14.6□□□□□ -0.07
SGPP1-201ENST00000247225 SNX22Q96L94 193 aa14.6□□□□□ -0.07
SGPP1-201ENST00000247225 BCO1Q9HAY6 547 aa14.6□□□□□ -0.07
SGPP1-201ENST00000247225 ZNF705GA8MUZ8 300 aaPredicted RBP14.59□□□□□ -0.07
SGPP1-201ENST00000247225 MPPED1O15442 326 aa14.59□□□□□ -0.07
SGPP1-201ENST00000247225 TCN2P20062 427 aa14.59□□□□□ -0.07
SGPP1-201ENST00000247225 GPM6AP51674 278 aa14.59□□□□□ -0.07
SGPP1-201ENST00000247225 TUBD1Q9UJT1 453 aa14.59□□□□□ -0.07
SGPP1-201ENST00000247225 TINAGQ9UJW2 476 aa14.59□□□□□ -0.07
SGPP1-201ENST00000247225 HS3ST3B1Q9Y662 390 aa14.59□□□□□ -0.07
SGPP1-201ENST00000247225 A0A1W2PNV4 684 aa14.59□□□□□ -0.07
SGPP1-201ENST00000247225 HIST2H3PS2Q5TEC6 136 aa14.59□□□□□ -0.07
SGPP1-201ENST00000247225 WDR25Q64LD2 544 aaPredicted RBP14.59□□□□□ -0.07
SGPP1-201ENST00000247225 AAED1Q7RTV5 226 aa14.59□□□□□ -0.07
SGPP1-201ENST00000247225 TMEM252Q8N6L7 170 aa14.59□□□□□ -0.07
SGPP1-201ENST00000247225 TCEAL7Q9BRU2 100 aa14.59□□□□□ -0.07
SGPP1-201ENST00000247225 PPP1R2P9O14990 202 aa14.59□□□□□ -0.07
SGPP1-201ENST00000247225 SURF2Q15527 256 aaPredicted RBP14.59□□□□□ -0.07
SGPP1-201ENST00000247225 DPPA2Q7Z7J5 298 aa14.59□□□□□ -0.07
SGPP1-201ENST00000247225 ZNF610Q8N9Z0 462 aa14.59□□□□□ -0.07
SGPP1-201ENST00000247225 EXTL1Q92935 676 aa14.59□□□□□ -0.07
SGPP1-201ENST00000247225 SRXN1Q9BYN0 137 aa14.59□□□□□ -0.07
SGPP1-201ENST00000247225 CALHM2Q9HA72 323 aa14.59□□□□□ -0.07
SGPP1-201ENST00000247225 GLRX2Q9NS18 164 aa14.59□□□□□ -0.07
SGPP1-201ENST00000247225 TK1P04183 234 aa14.58□□□□□ -0.07
SGPP1-201ENST00000247225 CCDC71LQ8N9Z2 235 aa14.58□□□□□ -0.07
SGPP1-201ENST00000247225 MSI2Q96DH6 328 aaKnown RBP14.58□□□□□ -0.07
SGPP1-201ENST00000247225 WFIKKN1Q96NZ8 548 aa14.58□□□□□ -0.07
SGPP1-201ENST00000247225 CEACAM18A8MTB9 384 aa14.58□□□□□ -0.08
SGPP1-201ENST00000247225 ZNF587BE7ETH6 402 aa14.58□□□□□ -0.08
SGPP1-201ENST00000247225 PHOX2AO14813 284 aa14.58□□□□□ -0.08
SGPP1-201ENST00000247225 SOX15O60248 233 aa14.58□□□□□ -0.08
SGPP1-201ENST00000247225 METTL15P1P0C7V9 234 aa14.58□□□□□ -0.08
SGPP1-201ENST00000247225 ZNF665Q9H7R5 613 aa14.58□□□□□ -0.08
SGPP1-201ENST00000247225 AURKAIP1Q9NWT8 199 aaPredicted RBP14.58□□□□□ -0.08
SGPP1-201ENST00000247225 KCNS2Q9ULS6 477 aa14.58□□□□□ -0.08
SGPP1-201ENST00000247225 CEBPZOSA8MTT3 80 aa14.58□□□□□ -0.08
SGPP1-201ENST00000247225 MSX1P28360 303 aa14.58□□□□□ -0.08
SGPP1-201ENST00000247225 NTF4P34130 210 aa14.58□□□□□ -0.08
SGPP1-201ENST00000247225 SUMO3P55854 103 aaPredicted RBP14.58□□□□□ -0.08
SGPP1-201ENST00000247225 MLF1P58340 268 aa14.58□□□□□ -0.08
SGPP1-201ENST00000247225 ZXDAP98168 799 aa14.58□□□□□ -0.08
SGPP1-201ENST00000247225 ARL6IP1Q15041 203 aa14.58□□□□□ -0.08
SGPP1-201ENST00000247225 CNN3Q15417 329 aaKnown RBP14.58□□□□□ -0.08
SGPP1-201ENST00000247225 OR1F12Q8NHA8 337 aa14.58□□□□□ -0.08
SGPP1-201ENST00000247225 RNF122Q9H9V4 155 aa14.58□□□□□ -0.08
SGPP1-201ENST00000247225 PPP1R3CQ9UQK1 317 aa14.58□□□□□ -0.08
SGPP1-201ENST00000247225 COL6A3P12111 3177 aa14.57□□□□□ -0.08
SGPP1-201ENST00000247225 ASPMQ8IZT6 3477 aa14.57□□□□□ -0.08
SGPP1-201ENST00000247225 CFIP05156 583 aa14.57□□□□□ -0.08
SGPP1-201ENST00000247225 OTX2P32243 289 aa14.57□□□□□ -0.08
SGPP1-201ENST00000247225 ZNF266Q14584 549 aa14.57□□□□□ -0.08
SGPP1-201ENST00000247225 WIPI1Q5MNZ9 446 aaPredicted RBP14.57□□□□□ -0.08
SGPP1-201ENST00000247225 ZNF818PQ6ZRF7 136 aa14.57□□□□□ -0.08
SGPP1-201ENST00000247225 IL22RA1Q8N6P7 574 aa14.57□□□□□ -0.08
SGPP1-201ENST00000247225 BOD1Q96IK1 185 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms