RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 KIR2DS1A0A191URI9 304 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 A0A1B0GX12 115 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 FZD6O60353 706 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 KIR2DS4P43632 304 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 KIR2DS1Q14954 304 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 BSXQ3C1V8 233 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 OR1F12Q8NHA8 337 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 MUCL1Q96DR8 90 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 ATXN7O15265 892 aaPredicted RBP6.65□□□□□ -1.34
RIF1-201ENST00000243326 HTN1P15515 57 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 MPLP40238 635 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 SGK494Q96LW2 274 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 GPR61Q9BZJ8 451 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 GDE1Q9NZC3 331 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 ZNF217O75362 1048 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 RECKO95980 971 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 HSD17B10Q99714 261 aaKnown RBP6.65□□□□□ -1.34
RIF1-201ENST00000243326 PKIAP61925 76 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 NPEPL1Q8NDH3 523 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 OR8B12Q8NGG6 310 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 ONECUT1Q9UBC0 465 aa6.65□□□□□ -1.34
RIF1-201ENST00000243326 IGHV5-51A0A0C4DH38 117 aa6.65□□□□□ -1.35
RIF1-201ENST00000243326 MT-CO3P00414 261 aa6.65□□□□□ -1.35
RIF1-201ENST00000243326 CRHP06850 196 aa6.65□□□□□ -1.35
RIF1-201ENST00000243326 ECI1P42126 302 aa6.65□□□□□ -1.35
RIF1-201ENST00000243326 FHITP49789 147 aa6.65□□□□□ -1.35
RIF1-201ENST00000243326 FXYD3Q14802 87 aa6.65□□□□□ -1.35
RIF1-201ENST00000243326 DCAF12Q5T6F0 453 aa6.65□□□□□ -1.35
RIF1-201ENST00000243326 C8orf82Q6P1X6 216 aaPredicted RBP6.65□□□□□ -1.35
RIF1-201ENST00000243326 RNF2Q99496 336 aa6.65□□□□□ -1.35
RIF1-201ENST00000243326 HSPB9Q9BQS6 159 aa6.65□□□□□ -1.35
RIF1-201ENST00000243326 RREB1Q92766 1687 aa6.65□□□□□ -1.35
RIF1-201ENST00000243326 DIRC3C9JPN6 131 aa6.65□□□□□ -1.35
RIF1-201ENST00000243326 TNFRSF4P43489 277 aa6.65□□□□□ -1.35
RIF1-201ENST00000243326 NSUN5P2Q63ZY6 315 aa6.65□□□□□ -1.35
RIF1-201ENST00000243326 MORN4Q8NDC4 146 aa6.65□□□□□ -1.35
RIF1-201ENST00000243326 S1PR3Q99500 378 aa6.65□□□□□ -1.35
RIF1-201ENST00000243326 H0YL77 283 aa6.65□□□□□ -1.35
RIF1-201ENST00000243326 LYZP61626 148 aa6.65□□□□□ -1.35
RIF1-201ENST00000243326 EWSR1Q01844 656 aaKnown RBP eCLIP6.65□□□□□ -1.35
RIF1-201ENST00000243326 LYG1Q8N1E2 194 aa6.65□□□□□ -1.35
RIF1-201ENST00000243326 TUBGCP6Q96RT7 1819 aa6.65□□□□□ -1.35
RIF1-201ENST00000243326 INHBBP09529 407 aa6.65□□□□□ -1.35
RIF1-201ENST00000243326 RPS19BP1Q86WX3 136 aaKnown RBP6.65□□□□□ -1.35
RIF1-201ENST00000243326 OR2C3Q8N628 320 aa6.65□□□□□ -1.35
RIF1-201ENST00000243326 PCGF1Q9BSM1 259 aa6.65□□□□□ -1.35
RIF1-201ENST00000243326 ALS2Q96Q42 1657 aa6.65□□□□□ -1.35
RIF1-201ENST00000243326 MFSD2BA6NFX1 497 aa6.65□□□□□ -1.35
RIF1-201ENST00000243326 ZGLP1P0C6A0 271 aa6.65□□□□□ -1.35
RIF1-201ENST00000243326 HSD17B7P56937 341 aa6.65□□□□□ -1.35
RIF1-201ENST00000243326 GPR27Q9NS67 375 aa6.65□□□□□ -1.35
RIF1-201ENST00000243326 UFC1Q9Y3C8 167 aa6.65□□□□□ -1.35
RIF1-201ENST00000243326 A0A087WV48 116 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 OPRK1P41145 380 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 CNN1P51911 297 aaKnown RBP6.64□□□□□ -1.35
RIF1-201ENST00000243326 SMAD4Q13485 552 aaKnown RBP6.64□□□□□ -1.35
RIF1-201ENST00000243326 OR1B1Q8NGR6 318 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 SNAI2O43623 268 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 GALNSP34059 522 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 RPL34P49207 117 aaKnown RBP6.64□□□□□ -1.35
RIF1-201ENST00000243326 RAC1P63000 192 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 FZD2Q14332 565 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 WDR88Q6ZMY6 472 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 NAT6Q93015 286 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 ZFP64Q9NPA5 681 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 CCL27Q9Y4X3 112 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 FAM157AC9JC47 383 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 DHRS11Q6UWP2 260 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 LRRC75AQ8NAA5 344 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 FAM60AQ9NP50 221 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 RAB18Q9NP72 206 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 ARRDC5A6NEK1 342 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 SIAH2O43255 324 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 NGFP01138 241 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 MOB3BQ86TA1 216 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 OR2T10Q8NGZ9 312 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 NCBP2LA6PVI3 153 aaKnown RBP6.64□□□□□ -1.35
RIF1-201ENST00000243326 EIF4E2O60573 245 aaKnown RBP6.64□□□□□ -1.35
RIF1-201ENST00000243326 NMBP08949 121 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 H2BFSP57053 126 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 OR2D3Q8NGH3 330 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 OR1N1Q8NGS0 311 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 TMEM230Q96A57 120 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 RBM14Q96PK6 669 aaKnown RBP6.64□□□□□ -1.35
RIF1-201ENST00000243326 GAL3ST2Q9H3Q3 398 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 DLEC1Q9Y238 1755 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 SRSF10O75494 262 aaKnown RBP6.64□□□□□ -1.35
RIF1-201ENST00000243326 PSG2P11465 335 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 EGR1P18146 543 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 COL9A1P20849 921 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 PPICP45877 212 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 CCL7P80098 99 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 HLA-DRB5Q30154 266 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 ZNF841Q6ZN19 808 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 MOB3AQ96BX8 217 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 NPTNQ9Y639 398 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 LRP5O75197 1615 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 GRIFINA4D1Z8 144 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 CLDN34H7C241 214 aa6.64□□□□□ -1.35
RIF1-201ENST00000243326 ZNF660Q6AZW8 331 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms