RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 BPIFCQ8NFQ6 507 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 RHOFQ9HBH0 211 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 GLRX2Q9NS18 164 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 LHX6Q9UPM6 363 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 TMED3Q9Y3Q3 217 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 FREM1Q5H8C1 2179 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 MED13Q9UHV7 2174 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 EP300Q09472 2414 aaPredicted RBP13.84□□□□□ -0.19
UBE3D-201ENST00000237186 KIR2DS1A0A191URI9 304 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 LOC105371267A0A1B0GV96 52 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 E5RGE8 158 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 ZNHIT1O43257 154 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 TUSC2O75896 110 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 JTBO76095 146 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 KIR2DS4P43632 304 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 RND3P61587 244 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 TAGLNQ01995 201 aaKnown RBP13.84□□□□□ -0.19
UBE3D-201ENST00000237186 IL24Q13007 206 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 IL13RA2Q14627 380 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 KIR2DS1Q14954 304 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 PHLDA2Q53GA4 152 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 TMEM268Q5VZI3 342 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 SMIM8Q96KF7 97 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 PKIBQ9C010 78 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 C12orf49Q9H741 205 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 IFT22Q9H7X7 185 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 LPAR3Q9UBY5 353 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 AMDHD2Q9Y303 409 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 NSG2Q9Y328 171 aa13.84□□□□□ -0.19
UBE3D-201ENST00000237186 TNRC6AQ8NDV7 1962 aaKnown RBP13.84□□□□□ -0.19
UBE3D-201ENST00000237186 MPPED1O15442 326 aa13.83□□□□□ -0.2
UBE3D-201ENST00000237186 IGHG3P01860 377 aa13.83□□□□□ -0.2
UBE3D-201ENST00000237186 MBPP02686 304 aaPredicted RBP13.83□□□□□ -0.2
UBE3D-201ENST00000237186 TK1P04183 234 aa13.83□□□□□ -0.2
UBE3D-201ENST00000237186 FTH1P19P0C7X4 201 aa13.83□□□□□ -0.2
UBE3D-201ENST00000237186 DUSP1P28562 367 aa13.83□□□□□ -0.2
UBE3D-201ENST00000237186 GNRHRP30968 328 aa13.83□□□□□ -0.2
UBE3D-201ENST00000237186 SRPXP78539 464 aa13.83□□□□□ -0.2
UBE3D-201ENST00000237186 BTN1A1Q13410 526 aa13.83□□□□□ -0.2
UBE3D-201ENST00000237186 RPL7L1Q6DKI1 246 aaKnown RBP13.83□□□□□ -0.2
UBE3D-201ENST00000237186 OR2A2Q6IF42 318 aa13.83□□□□□ -0.2
UBE3D-201ENST00000237186 MDP1Q86V88 176 aa13.83□□□□□ -0.2
UBE3D-201ENST00000237186 FAM219AQ8IW50 185 aa13.83□□□□□ -0.2
UBE3D-201ENST00000237186 ARL11Q969Q4 196 aa13.83□□□□□ -0.2
UBE3D-201ENST00000237186 TAF9BQ9HBM6 251 aa13.83□□□□□ -0.2
UBE3D-201ENST00000237186 ASF1BQ9NVP2 202 aa13.83□□□□□ -0.2
UBE3D-201ENST00000237186 FBXO9Q9UK97 447 aaPredicted RBP13.83□□□□□ -0.2
UBE3D-201ENST00000237186 ATP23Q9Y6H3 246 aa13.83□□□□□ -0.2
UBE3D-201ENST00000237186 SPAARA0A1B0GVQ0 90 aa13.82□□□□□ -0.2
UBE3D-201ENST00000237186 TRDCB7Z8K6 153 aa13.82□□□□□ -0.2
UBE3D-201ENST00000237186 SYNGR1O43759 233 aa13.82□□□□□ -0.2
UBE3D-201ENST00000237186 DIRAS3O95661 229 aa13.82□□□□□ -0.2
UBE3D-201ENST00000237186 APOC3P02656 99 aa13.82□□□□□ -0.2
UBE3D-201ENST00000237186 MST1LQ2TV78 715 aa13.82□□□□□ -0.2
UBE3D-201ENST00000237186 HAGHLQ6PII5 290 aaPredicted RBP13.82□□□□□ -0.2
UBE3D-201ENST00000237186 FBXW12Q6X9E4 464 aa13.82□□□□□ -0.2
UBE3D-201ENST00000237186 BATF2Q8N1L9 274 aa13.82□□□□□ -0.2
UBE3D-201ENST00000237186 OR11L1Q8NGX0 322 aa13.82□□□□□ -0.2
UBE3D-201ENST00000237186 MMP26Q9NRE1 261 aa13.82□□□□□ -0.2
UBE3D-201ENST00000237186 COQ3Q9NZJ6 369 aa13.82□□□□□ -0.2
UBE3D-201ENST00000237186 TMEM218A2RU14 115 aa13.82□□□□□ -0.2
UBE3D-201ENST00000237186 LILRA1O75019 489 aa13.82□□□□□ -0.2
UBE3D-201ENST00000237186 TMEM33P57088 247 aa13.82□□□□□ -0.2
UBE3D-201ENST00000237186 GPR157Q5UAW9 335 aa13.82□□□□□ -0.2
UBE3D-201ENST00000237186 ZNF880Q6PDB4 577 aa13.82□□□□□ -0.2
UBE3D-201ENST00000237186 IGFL2Q6UWQ7 119 aa13.82□□□□□ -0.2
UBE3D-201ENST00000237186 IL34Q6ZMJ4 242 aa13.82□□□□□ -0.2
UBE3D-201ENST00000237186 FOXRED2Q8IWF2 684 aa13.82□□□□□ -0.2
UBE3D-201ENST00000237186 OR5T2Q8NGG2 359 aa13.82□□□□□ -0.2
UBE3D-201ENST00000237186 LHFPL5Q8TAF8 219 aa13.82□□□□□ -0.2
UBE3D-201ENST00000237186 TMEM56Q96MV1 263 aa13.82□□□□□ -0.2
UBE3D-201ENST00000237186 MS4A7Q9GZW8 240 aaPredicted RBP13.82□□□□□ -0.2
UBE3D-201ENST00000237186 TMEM222Q9H0R3 208 aa13.82□□□□□ -0.2
UBE3D-201ENST00000237186 OR51I2Q9H344 312 aa13.82□□□□□ -0.2
UBE3D-201ENST00000237186 OR2S2Q9NQN1 319 aa13.82□□□□□ -0.2
UBE3D-201ENST00000237186 IL36RNQ9UBH0 155 aa13.82□□□□□ -0.2
UBE3D-201ENST00000237186 TMEM56-RWDD3S4R434 201 aa13.82□□□□□ -0.2
UBE3D-201ENST00000237186 ZNF407Q9C0G0 2248 aa13.82□□□□□ -0.2
UBE3D-201ENST00000237186 C3orf85A0A1B0GTC6 90 aa13.81□□□□□ -0.2
UBE3D-201ENST00000237186 PHF1O43189 567 aaPredicted RBP13.81□□□□□ -0.2
UBE3D-201ENST00000237186 SCTP09683 121 aa13.81□□□□□ -0.2
UBE3D-201ENST00000237186 ZNF14P17017 642 aaPredicted RBP13.81□□□□□ -0.2
UBE3D-201ENST00000237186 FAM76BQ5HYJ3 339 aa13.81□□□□□ -0.2
UBE3D-201ENST00000237186 UBAC2Q8NBM4 344 aa13.81□□□□□ -0.2
UBE3D-201ENST00000237186 TP53RKQ96S44 253 aa13.81□□□□□ -0.2
UBE3D-201ENST00000237186 ARV1Q9H2C2 271 aa13.81□□□□□ -0.2
UBE3D-201ENST00000237186 ZC4H2Q9NQZ6 224 aa13.81□□□□□ -0.2
UBE3D-201ENST00000237186 CLCF1Q9UBD9 225 aa13.81□□□□□ -0.2
UBE3D-201ENST00000237186 FBXL17Q9UF56 701 aa13.81□□□□□ -0.2
UBE3D-201ENST00000237186 LSM5Q9Y4Y9 91 aaKnown RBP13.81□□□□□ -0.2
UBE3D-201ENST00000237186 SHANK1Q9Y566 2161 aa13.8□□□□□ -0.2
UBE3D-201ENST00000237186 PRKACAP17612 351 aa13.8□□□□□ -0.2
UBE3D-201ENST00000237186 P2RY1P47900 373 aa13.8□□□□□ -0.2
UBE3D-201ENST00000237186 SULT1A2P50226 295 aa13.8□□□□□ -0.2
UBE3D-201ENST00000237186 TGFBR3Q03167 851 aa13.8□□□□□ -0.2
UBE3D-201ENST00000237186 ZNF273Q14593 569 aa13.8□□□□□ -0.2
UBE3D-201ENST00000237186 HERPUD1Q15011 391 aa13.8□□□□□ -0.2
UBE3D-201ENST00000237186 TBC1D28Q2M2D7 210 aa13.8□□□□□ -0.2
UBE3D-201ENST00000237186 OR2T2Q6IF00 324 aa13.8□□□□□ -0.2
UBE3D-201ENST00000237186 TMPRSS7Q7RTY8 843 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms