RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 CGAP01215 116 aa12.29□□□□□ -0.44
PRKAB1-201ENST00000229328 PXDC1Q5TGL8 231 aa12.29□□□□□ -0.44
PRKAB1-201ENST00000229328 A0A0D9SG52 128 aa12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 POM121CA8CG34 1229 aa12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 H0YL77 283 aa12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 HS3ST1O14792 307 aa12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 SELEP16581 610 aa12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 AADACP22760 399 aa12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 SP6Q3SY56 376 aa12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 PLEKHN1Q494U1 663 aaPredicted RBP12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 PHLDA2Q53GA4 152 aa12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 SGPP2Q8IWX5 399 aa12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 FAM58AQ8N1B3 248 aa12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 SUMF2Q8NBJ7 301 aa12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 DMRTA2Q96SC8 542 aa12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 Q9N2K0 584 aa12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 TRAV24A0A0B4J272 114 aa12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 OR2F2O95006 317 aa12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 RLN2P04090 185 aa12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 SCTP09683 121 aa12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 HOXC12P31275 282 aa12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 RAB14P61106 215 aa12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 OR2F1Q13607 317 aa12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 ZNF345Q14585 488 aa12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 ESCO2Q56NI9 601 aa12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 C20orf204Q6ZNR8 217 aa12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 ACOT7LQ6ZUV0 252 aa12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 OR11L1Q8NGX0 322 aa12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 SNIP1Q8TAD8 396 aaKnown RBP12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 KLF14Q8TD94 323 aaPredicted RBP12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 NEK7Q8TDX7 302 aa12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 PKIBQ9C010 78 aa12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 ZNF71Q9NQZ8 489 aaPredicted RBP12.28□□□□□ -0.44
PRKAB1-201ENST00000229328 J3QT63 122 aa12.27□□□□□ -0.44
PRKAB1-201ENST00000229328 GLI4P10075 376 aa12.27□□□□□ -0.44
PRKAB1-201ENST00000229328 HOXB1P14653 301 aaPredicted RBP12.27□□□□□ -0.44
PRKAB1-201ENST00000229328 RAC2P15153 192 aa12.27□□□□□ -0.44
PRKAB1-201ENST00000229328 RBMXP38159 391 aaKnown RBP12.27□□□□□ -0.44
PRKAB1-201ENST00000229328 RBM39Q14498 530 aaKnown RBP12.27□□□□□ -0.44
PRKAB1-201ENST00000229328 FAM76BQ5HYJ3 339 aa12.27□□□□□ -0.44
PRKAB1-201ENST00000229328 POC1AQ8NBT0 407 aa12.27□□□□□ -0.44
PRKAB1-201ENST00000229328 SCCPDHQ8NBX0 429 aa12.27□□□□□ -0.44
PRKAB1-201ENST00000229328 C1orf162Q8NEQ5 155 aaPredicted RBP12.27□□□□□ -0.44
PRKAB1-201ENST00000229328 RDH5Q92781 318 aa12.27□□□□□ -0.44
PRKAB1-201ENST00000229328 MOB3AQ96BX8 217 aa12.27□□□□□ -0.44
PRKAB1-201ENST00000229328 RRNAD1Q96FB5 475 aaKnown RBP12.27□□□□□ -0.44
PRKAB1-201ENST00000229328 BOD1Q96IK1 185 aa12.27□□□□□ -0.44
PRKAB1-201ENST00000229328 ADAT1Q9BUB4 502 aaKnown RBP12.27□□□□□ -0.44
PRKAB1-201ENST00000229328 RTL8AQ9BWD3 113 aa12.27□□□□□ -0.44
PRKAB1-201ENST00000229328 COL25A1Q9BXS0 654 aaPredicted RBP12.27□□□□□ -0.44
PRKAB1-201ENST00000229328 PROCRQ9UNN8 238 aa12.27□□□□□ -0.44
PRKAB1-201ENST00000229328 MBD3L4A6NDZ8 208 aaPredicted RBP12.27□□□□□ -0.45
PRKAB1-201ENST00000229328 MBD3L3A6NE82 208 aaPredicted RBP12.27□□□□□ -0.45
PRKAB1-201ENST00000229328 MBD3L5A6NJ08 208 aaPredicted RBP12.27□□□□□ -0.45
PRKAB1-201ENST00000229328 PRSS44E7EML9 344 aa12.27□□□□□ -0.45
PRKAB1-201ENST00000229328 CECR9P0C854 216 aa12.27□□□□□ -0.45
PRKAB1-201ENST00000229328 CYCSP99999 105 aaKnown RBP12.27□□□□□ -0.45
PRKAB1-201ENST00000229328 HERPUD1Q15011 391 aa12.27□□□□□ -0.45
PRKAB1-201ENST00000229328 COMMD7Q86VX2 200 aa12.27□□□□□ -0.45
PRKAB1-201ENST00000229328 OR5T2Q8NGG2 359 aa12.27□□□□□ -0.45
PRKAB1-201ENST00000229328 MBD3L2Q8NHZ7 208 aaPredicted RBP12.27□□□□□ -0.45
PRKAB1-201ENST00000229328 SCARB1Q8WTV0 552 aa12.27□□□□□ -0.45
PRKAB1-201ENST00000229328 RTN4IP1Q8WWV3 396 aaPredicted RBP12.27□□□□□ -0.45
PRKAB1-201ENST00000229328 DCUN1D4Q92564 292 aa12.27□□□□□ -0.45
PRKAB1-201ENST00000229328 C1orf123Q9NWV4 160 aa12.27□□□□□ -0.45
PRKAB1-201ENST00000229328 OR5AC2Q9NZP5 309 aa12.27□□□□□ -0.45
PRKAB1-201ENST00000229328 GSKIPQ9P0R6 139 aa12.27□□□□□ -0.45
PRKAB1-201ENST00000229328 NUP50Q9UKX7 468 aa12.27□□□□□ -0.45
PRKAB1-201ENST00000229328 FAM215AQ9Y5M1 114 aa12.27□□□□□ -0.45
PRKAB1-201ENST00000229328 IQCF6A8MYZ5 107 aa12.26□□□□□ -0.45
PRKAB1-201ENST00000229328 GLP1RP43220 463 aa12.26□□□□□ -0.45
PRKAB1-201ENST00000229328 IL15RAQ13261 267 aa12.26□□□□□ -0.45
PRKAB1-201ENST00000229328 ST8SIA2Q92186 375 aa12.26□□□□□ -0.45
PRKAB1-201ENST00000229328 C2orf50Q96LR7 162 aa12.26□□□□□ -0.45
PRKAB1-201ENST00000229328 PLK3Q9H4B4 646 aa12.26□□□□□ -0.45
PRKAB1-201ENST00000229328 NAA60Q9H7X0 242 aa12.26□□□□□ -0.45
PRKAB1-201ENST00000229328 SLC2A9Q9NRM0 540 aa12.26□□□□□ -0.45
PRKAB1-201ENST00000229328 FZR1Q9UM11 496 aa12.26□□□□□ -0.45
PRKAB1-201ENST00000229328 BET1O15155 118 aa12.26□□□□□ -0.45
PRKAB1-201ENST00000229328 BCL2L11O43521 198 aa12.26□□□□□ -0.45
PRKAB1-201ENST00000229328 NMBP08949 121 aa12.26□□□□□ -0.45
PRKAB1-201ENST00000229328 OR5AC1P0C628 307 aa12.26□□□□□ -0.45
PRKAB1-201ENST00000229328 ZNF154Q13106 437 aa12.26□□□□□ -0.45
PRKAB1-201ENST00000229328 RAB32Q13637 225 aa12.26□□□□□ -0.45
PRKAB1-201ENST00000229328 ABCA11PQ4W5N1 156 aa12.26□□□□□ -0.45
PRKAB1-201ENST00000229328 Q6ZS49 121 aa12.26□□□□□ -0.45
PRKAB1-201ENST00000229328 MRPL24Q96A35 216 aaKnown RBP12.26□□□□□ -0.45
PRKAB1-201ENST00000229328 CXorf58Q96LI9 332 aa12.26□□□□□ -0.45
PRKAB1-201ENST00000229328 TINAGQ9UJW2 476 aa12.26□□□□□ -0.45
PRKAB1-201ENST00000229328 TRBV6-7A0A0A0MS04 114 aa12.25□□□□□ -0.45
PRKAB1-201ENST00000229328 IGKV1-6A0A0C4DH72 117 aa12.25□□□□□ -0.45
PRKAB1-201ENST00000229328 KANTRA0A1W2PQU2 76 aa12.25□□□□□ -0.45
PRKAB1-201ENST00000229328 LRP5LA4QPB2 252 aa12.25□□□□□ -0.45
PRKAB1-201ENST00000229328 CDIPTO14735 213 aa12.25□□□□□ -0.45
PRKAB1-201ENST00000229328 PPYP01298 95 aa12.25□□□□□ -0.45
PRKAB1-201ENST00000229328 LUMP51884 338 aaPredicted RBP12.25□□□□□ -0.45
PRKAB1-201ENST00000229328 Q6P435 159 aa12.25□□□□□ -0.45
PRKAB1-201ENST00000229328 FAM122CQ6P4D5 195 aa12.25□□□□□ -0.45
PRKAB1-201ENST00000229328 INO80EQ8NBZ0 244 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms