RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 HERPUD1Q15011 391 aa16.32■□□□□ 0.2
YBX3-201ENST00000228251 ACSF3Q4G176 576 aaPredicted RBP16.32■□□□□ 0.2
YBX3-201ENST00000228251 GGNBP1Q5YKI7 109 aa16.32■□□□□ 0.2
YBX3-201ENST00000228251 VWA1Q6PCB0 445 aa16.32■□□□□ 0.2
YBX3-201ENST00000228251 ZNF880Q6PDB4 577 aa16.32■□□□□ 0.2
YBX3-201ENST00000228251 IGFL3Q6UXB1 125 aa16.32■□□□□ 0.2
YBX3-201ENST00000228251 LDLRAD3Q86YD5 345 aa16.32■□□□□ 0.2
YBX3-201ENST00000228251 MSI2Q96DH6 328 aaKnown RBP16.32■□□□□ 0.2
YBX3-201ENST00000228251 SUCNR1Q9BXA5 334 aa16.32■□□□□ 0.2
YBX3-201ENST00000228251 SHARPINQ9H0F6 387 aa16.32■□□□□ 0.2
YBX3-201ENST00000228251 TRAV24A0A0B4J272 114 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 A0A1W2PR80 420 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 TUSC2O75896 110 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 IGKV3-15P01624 115 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 OR5AC1P0C628 307 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 PRKACAP17612 351 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 IL32P24001 234 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 UBE2NP61088 152 aaKnown RBP16.31■□□□□ 0.2
YBX3-201ENST00000228251 ERVK11-1P61568 191 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 C18orf12Q96KH6 178 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 CNTNAP3BQ96NU0 1288 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 PRRX2Q99811 253 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 C1QTNF6Q9BXI9 259 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 CNTNAP3Q9BZ76 1288 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 OR2J1Q9GZK6 312 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 SPACA1Q9HBV2 294 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 INTS1Q8N201 2190 aaKnown RBP16.31■□□□□ 0.2
YBX3-201ENST00000228251 IGKV1-6A0A0C4DH72 117 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 IQCF6A8MYZ5 107 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 RHBDL1O75783 438 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 RAC2P15153 192 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 CBR1P16152 277 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 ERVS71-1P61550 626 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 IGFBP7Q16270 282 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 IAH1Q2TAA2 248 aaPredicted RBP16.31■□□□□ 0.2
YBX3-201ENST00000228251 FAM74A1Q5RGS3 127 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 Q6P435 159 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 LIAT1Q6ZQX7 453 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 HSD17B13Q7Z5P4 300 aaPredicted RBP16.31■□□□□ 0.2
YBX3-201ENST00000228251 C5orf24Q7Z6I8 188 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 FAM58AQ8N1B3 248 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 SUMF2Q8NBJ7 301 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 MRPL30Q8TCC3 161 aaKnown RBP16.31■□□□□ 0.2
YBX3-201ENST00000228251 GLYATL2Q8WU03 294 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 CDH20Q9HBT6 801 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 KCNIP3Q9Y2W7 256 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 MEMO1Q9Y316 297 aa16.31■□□□□ 0.2
YBX3-201ENST00000228251 F5H0A9 414 aaPredicted RBP16.3■□□□□ 0.2
YBX3-201ENST00000228251 H7C1Q1 480 aa16.3■□□□□ 0.2
YBX3-201ENST00000228251 DUSP1P28562 367 aa16.3■□□□□ 0.2
YBX3-201ENST00000228251 FOXF2Q12947 444 aa16.3■□□□□ 0.2
YBX3-201ENST00000228251 MRPL49Q13405 166 aaKnown RBP16.3■□□□□ 0.2
YBX3-201ENST00000228251 TSC22D1Q15714 1073 aa16.3■□□□□ 0.2
YBX3-201ENST00000228251 ABCA11PQ4W5N1 156 aa16.3■□□□□ 0.2
YBX3-201ENST00000228251 OR11L1Q8NGX0 322 aa16.3■□□□□ 0.2
YBX3-201ENST00000228251 LRFN3Q9BTN0 628 aa16.3■□□□□ 0.2
YBX3-201ENST00000228251 RIMS4Q9H426 269 aaPredicted RBP16.3■□□□□ 0.2
YBX3-201ENST00000228251 PLSCR4Q9NRQ2 329 aa16.3■□□□□ 0.2
YBX3-201ENST00000228251 ATP23Q9Y6H3 246 aa16.3■□□□□ 0.2
YBX3-201ENST00000228251 GTF3C1Q12789 2109 aa16.3■□□□□ 0.2
YBX3-201ENST00000228251 LRP5LA4QPB2 252 aa16.29■□□□□ 0.2
YBX3-201ENST00000228251 AHRRA9YTQ3 701 aa16.29■□□□□ 0.2
YBX3-201ENST00000228251 TNFSF13O75888 250 aa16.29■□□□□ 0.2
YBX3-201ENST00000228251 SCTP09683 121 aa16.29■□□□□ 0.2
YBX3-201ENST00000228251 PET100P0DJ07 73 aa16.29■□□□□ 0.2
YBX3-201ENST00000228251 SPINK2P20155 84 aa16.29■□□□□ 0.2
YBX3-201ENST00000228251 SNTB1Q13884 538 aaKnown RBP16.29■□□□□ 0.2
YBX3-201ENST00000228251 ZNF169Q14929 603 aaPredicted RBP16.29■□□□□ 0.2
YBX3-201ENST00000228251 ALKBH6Q3KRA9 238 aa16.29■□□□□ 0.2
YBX3-201ENST00000228251 SP6Q3SY56 376 aa16.29■□□□□ 0.2
YBX3-201ENST00000228251 PHLDA2Q53GA4 152 aa16.29■□□□□ 0.2
YBX3-201ENST00000228251 PAN3Q58A45 887 aaKnown RBP16.29■□□□□ 0.2
YBX3-201ENST00000228251 C20orf204Q6ZNR8 217 aa16.29■□□□□ 0.2
YBX3-201ENST00000228251 FAM219AQ8IW50 185 aa16.29■□□□□ 0.2
YBX3-201ENST00000228251 C17orf78Q8N4C9 275 aa16.29■□□□□ 0.2
YBX3-201ENST00000228251 SLC25A40Q8TBP6 338 aa16.29■□□□□ 0.2
YBX3-201ENST00000228251 RTL8AQ9BWD3 113 aa16.29■□□□□ 0.2
YBX3-201ENST00000228251 SLC5A7Q9GZV3 580 aa16.29■□□□□ 0.2
YBX3-201ENST00000228251 TRDCB7Z8K6 153 aa16.28■□□□□ 0.2
YBX3-201ENST00000228251 C3orf80F5H4A9 247 aa16.28■□□□□ 0.2
YBX3-201ENST00000228251 CGAP01215 116 aa16.28■□□□□ 0.2
YBX3-201ENST00000228251 GNRHRP30968 328 aa16.28■□□□□ 0.2
YBX3-201ENST00000228251 NOVA1P51513 510 aaKnown RBP16.28■□□□□ 0.2
YBX3-201ENST00000228251 UCP2P55851 309 aa16.28■□□□□ 0.2
YBX3-201ENST00000228251 HERV-K104P61576 105 aa16.28■□□□□ 0.2
YBX3-201ENST00000228251 RND3P61587 244 aa16.28■□□□□ 0.2
YBX3-201ENST00000228251 OR2A2Q6IF42 318 aa16.28■□□□□ 0.2
YBX3-201ENST00000228251 CNEP1R1Q8N9A8 125 aa16.28■□□□□ 0.2
YBX3-201ENST00000228251 BVESQ8NE79 360 aa16.28■□□□□ 0.2
YBX3-201ENST00000228251 LHFPL5Q8TAF8 219 aa16.28■□□□□ 0.2
YBX3-201ENST00000228251 PFDN2Q9UHV9 154 aa16.28■□□□□ 0.2
YBX3-201ENST00000228251 AKAP13Q12802 2813 aa16.28■□□□□ 0.2
YBX3-201ENST00000228251 KIR2DS1A0A191URI9 304 aa16.28■□□□□ 0.2
YBX3-201ENST00000228251 FGF16O43320 207 aa16.28■□□□□ 0.2
YBX3-201ENST00000228251 ZP3P21754 424 aa16.28■□□□□ 0.2
YBX3-201ENST00000228251 KIR2DS4P43632 304 aa16.28■□□□□ 0.2
YBX3-201ENST00000228251 PSG7Q13046 419 aa16.28■□□□□ 0.2
YBX3-201ENST00000228251 KIR2DS1Q14954 304 aa16.28■□□□□ 0.2
YBX3-201ENST00000228251 PCSK4Q6UW60 755 aa16.28■□□□□ 0.2
YBX3-201ENST00000228251 UNQ6126/PRO20091Q6UXV3 157 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms