RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 P2RY1P47900 373 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 RPS4XP62701 263 aaKnown RBP9.88□□□□□ -0.83
USP31-201ENST00000219689 RHOBP62745 196 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 OR2Y1Q8NGV0 311 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 ANAPC13Q9BS18 74 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 DENND4CQ5VZ89 1909 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 TMEM238LA0A1B0GVL6 79 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 A6NJY4 79 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 M0R3E3 92 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 ZFPL1O95159 310 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 MT-ATP6P00846 226 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 CD40P25942 277 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 HOXA6P31267 233 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 MRPL18Q9H0U6 180 aaKnown RBP9.88□□□□□ -0.83
USP31-201ENST00000219689 CKS1BP61024 79 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 PRDX1Q06830 199 aaKnown RBP9.88□□□□□ -0.83
USP31-201ENST00000219689 SMAGPQ0VAQ4 97 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 TMEM202A6NGA9 273 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 SERPINE3A8MV23 424 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 TGIF2LYQ8IUE0 185 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 MT-CO3P00414 261 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 RABIFP47224 123 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 ARF6P62330 175 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 RPS15P62841 145 aaKnown RBP9.88□□□□□ -0.83
USP31-201ENST00000219689 HERPUD1Q15011 391 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 CCL14Q16627 93 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 SLC48A1Q6P1K1 146 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 LURAP1LQ8IV03 231 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 WDFY1Q8IWB7 410 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 ST6GALNAC6Q969X2 333 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 SDF2Q99470 211 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 G3V3Y1 287 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 FGF18O76093 207 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 PDCD1Q15116 288 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 TMEM108Q6UXF1 575 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 ABHD3Q8WU67 409 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 HIST1H4GQ99525 98 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 MEGF9Q9H1U4 602 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 RICTORQ6R327 1708 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 PRSS37A4D1T9 235 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 P2RY2P41231 377 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 TMEM215Q68D42 235 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 C10orf126Q8N4M7 172 aa9.88□□□□□ -0.83
USP31-201ENST00000219689 TIMP1P01033 207 aa9.87□□□□□ -0.83
USP31-201ENST00000219689 LILRA3Q8N6C8 439 aaPredicted RBP9.87□□□□□ -0.83
USP31-201ENST00000219689 WNT10AQ9GZT5 417 aa9.87□□□□□ -0.83
USP31-201ENST00000219689 S1PR5Q9H228 398 aa9.87□□□□□ -0.83
USP31-201ENST00000219689 AREGP15514 252 aa9.87□□□□□ -0.83
USP31-201ENST00000219689 HLA-GP17693 338 aa9.87□□□□□ -0.83
USP31-201ENST00000219689 LPAR6P43657 344 aa9.87□□□□□ -0.83
USP31-201ENST00000219689 PARM1Q6UWI2 310 aa9.87□□□□□ -0.83
USP31-201ENST00000219689 DCAF7P61962 342 aa9.87□□□□□ -0.83
USP31-201ENST00000219689 USP3Q9Y6I4 520 aa9.87□□□□□ -0.83
USP31-201ENST00000219689 TET2Q6N021 2002 aaPredicted RBP9.87□□□□□ -0.83
USP31-201ENST00000219689 SLCO2B1O94956 709 aa9.87□□□□□ -0.83
USP31-201ENST00000219689 FBLN7Q53RD9 439 aa9.87□□□□□ -0.83
USP31-201ENST00000219689 NUFIP2Q7Z417 695 aaKnown RBP9.87□□□□□ -0.83
USP31-201ENST00000219689 CADM4Q8NFZ8 388 aa9.87□□□□□ -0.83
USP31-201ENST00000219689 A6NCN8 305 aa9.87□□□□□ -0.83
USP31-201ENST00000219689 SMIM13P0DJ93 91 aa9.87□□□□□ -0.83
USP31-201ENST00000219689 DUSP8Q13202 625 aa9.87□□□□□ -0.83
USP31-201ENST00000219689 SLC25A34Q6PIV7 304 aa9.87□□□□□ -0.83
USP31-201ENST00000219689 P4HTMQ9NXG6 502 aa9.87□□□□□ -0.83
USP31-201ENST00000219689 LOC390937A0A1W2PQ73 354 aa9.87□□□□□ -0.83
USP31-201ENST00000219689 SMPD2O60906 423 aa9.87□□□□□ -0.83
USP31-201ENST00000219689 S100A4P26447 101 aaKnown RBP9.87□□□□□ -0.83
USP31-201ENST00000219689 LSM11P83369 360 aaKnown RBP eCLIP9.87□□□□□ -0.83
USP31-201ENST00000219689 MRGPRGQ86SM5 289 aa9.87□□□□□ -0.83
USP31-201ENST00000219689 OR1N2Q8NGR9 330 aa9.87□□□□□ -0.83
USP31-201ENST00000219689 SIGMAR1Q99720 223 aa9.87□□□□□ -0.83
USP31-201ENST00000219689 MELTFP08582 738 aa9.87□□□□□ -0.83
USP31-201ENST00000219689 ALPK3Q96L96 1907 aa9.87□□□□□ -0.83
USP31-201ENST00000219689 PITX3O75364 302 aa9.87□□□□□ -0.83
USP31-201ENST00000219689 WDR38Q5JTN6 314 aa9.87□□□□□ -0.83
USP31-201ENST00000219689 H1FXQ92522 213 aaKnown RBP9.87□□□□□ -0.83
USP31-201ENST00000219689 PELI1Q96FA3 418 aa9.87□□□□□ -0.83
USP31-201ENST00000219689 COL25A1Q9BXS0 654 aaPredicted RBP9.87□□□□□ -0.83
USP31-201ENST00000219689 NKX6-3A6NJ46 265 aa9.86□□□□□ -0.83
USP31-201ENST00000219689 HSPB2A8KAH6 182 aa9.86□□□□□ -0.83
USP31-201ENST00000219689 NPIPB9F8W1W9 429 aa9.86□□□□□ -0.83
USP31-201ENST00000219689 HIST1H1DP16402 221 aaKnown RBP9.86□□□□□ -0.83
USP31-201ENST00000219689 HSPB2Q16082 182 aa9.86□□□□□ -0.83
USP31-201ENST00000219689 DEGS2Q6QHC5 323 aa9.86□□□□□ -0.83
USP31-201ENST00000219689 SH2D2AQ9NP31 389 aa9.86□□□□□ -0.83
USP31-201ENST00000219689 H0YL77 283 aa9.86□□□□□ -0.83
USP31-201ENST00000219689 GLIPR1P48060 266 aa9.86□□□□□ -0.83
USP31-201ENST00000219689 ZNF595Q8IYB9 648 aa9.86□□□□□ -0.83
USP31-201ENST00000219689 OSR2Q8N2R0 312 aa9.86□□□□□ -0.83
USP31-201ENST00000219689 WDR13Q9H1Z4 485 aa9.86□□□□□ -0.83
USP31-201ENST00000219689 DYNLRB1Q9NP97 96 aa9.86□□□□□ -0.83
USP31-201ENST00000219689 PAGE4O60829 102 aa9.86□□□□□ -0.83
USP31-201ENST00000219689 ETHE1O95571 254 aa9.86□□□□□ -0.83
USP31-201ENST00000219689 IRF3Q14653 427 aa9.86□□□□□ -0.83
USP31-201ENST00000219689 LRRC3BQ96PB8 259 aa9.86□□□□□ -0.83
USP31-201ENST00000219689 OR5AC2Q9NZP5 309 aa9.86□□□□□ -0.83
USP31-201ENST00000219689 AGFG1P52594 562 aaKnown RBP9.86□□□□□ -0.83
USP31-201ENST00000219689 SCCPDHQ8NBX0 429 aa9.86□□□□□ -0.83
USP31-201ENST00000219689 SIGLEC11Q96RL6 698 aa9.86□□□□□ -0.83
USP31-201ENST00000219689 CNTD2Q9H8S5 307 aa9.86□□□□□ -0.83
USP31-201ENST00000219689 CALHM2Q9HA72 323 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms