RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 CHRNB4P30926 498 aa16.7■□□□□ 0.26
TNFRSF1A-201ENST00000162749 FAM58AQ8N1B3 248 aa16.7■□□□□ 0.26
TNFRSF1A-201ENST00000162749 CCDC107Q8WV48 283 aa16.7■□□□□ 0.26
TNFRSF1A-201ENST00000162749 VSIG4Q9Y279 399 aa16.7■□□□□ 0.26
TNFRSF1A-201ENST00000162749 POLDIP2Q9Y2S7 368 aa16.7■□□□□ 0.26
TNFRSF1A-201ENST00000162749 IGLV3-9A0A075B6K5 115 aa16.69■□□□□ 0.26
TNFRSF1A-201ENST00000162749 LEUTXA8MZ59 168 aa16.69■□□□□ 0.26
TNFRSF1A-201ENST00000162749 M0R233 179 aa16.69■□□□□ 0.26
TNFRSF1A-201ENST00000162749 OR3A3P47888 321 aa16.69■□□□□ 0.26
TNFRSF1A-201ENST00000162749 KLF3P57682 345 aaPredicted RBP16.69■□□□□ 0.26
TNFRSF1A-201ENST00000162749 MPPED2Q15777 294 aa16.69■□□□□ 0.26
TNFRSF1A-201ENST00000162749 MPV17LQ2QL34 196 aa16.69■□□□□ 0.26
TNFRSF1A-201ENST00000162749 WFIKKN1Q96NZ8 548 aa16.69■□□□□ 0.26
TNFRSF1A-201ENST00000162749 PLK3Q9H4B4 646 aa16.69■□□□□ 0.26
TNFRSF1A-201ENST00000162749 RPS10-NUDT3A0A1W2PQS6 291 aa16.69■□□□□ 0.26
TNFRSF1A-201ENST00000162749 DPRXA6NFQ7 191 aa16.69■□□□□ 0.26
TNFRSF1A-201ENST00000162749 DISC1C4P0D8 188 aa16.69■□□□□ 0.26
TNFRSF1A-201ENST00000162749 PRSS44E7EML9 344 aa16.69■□□□□ 0.26
TNFRSF1A-201ENST00000162749 ABCD4O14678 606 aa16.69■□□□□ 0.26
TNFRSF1A-201ENST00000162749 PMP2P02689 132 aa16.69■□□□□ 0.26
TNFRSF1A-201ENST00000162749 DUSP1P28562 367 aa16.69■□□□□ 0.26
TNFRSF1A-201ENST00000162749 ERVK11-1P61568 191 aa16.69■□□□□ 0.26
TNFRSF1A-201ENST00000162749 RPS23P62266 143 aaKnown RBP16.69■□□□□ 0.26
TNFRSF1A-201ENST00000162749 ADORA2A-AS1P86434 159 aa16.69■□□□□ 0.26
TNFRSF1A-201ENST00000162749 CMSS1Q9BQ75 279 aaKnown RBP16.69■□□□□ 0.26
TNFRSF1A-201ENST00000162749 SYT3Q9BQG1 590 aa16.69■□□□□ 0.26
TNFRSF1A-201ENST00000162749 CXXC4Q9H2H0 198 aa16.69■□□□□ 0.26
TNFRSF1A-201ENST00000162749 RCC2Q9P258 522 aaKnown RBP16.69■□□□□ 0.26
TNFRSF1A-201ENST00000162749 LINC00862A6NCI5 91 aa16.68■□□□□ 0.26
TNFRSF1A-201ENST00000162749 PGA5P0DJD9 388 aa16.68■□□□□ 0.26
TNFRSF1A-201ENST00000162749 PPP3CBP16298 524 aa16.68■□□□□ 0.26
TNFRSF1A-201ENST00000162749 AMY2BP19961 511 aa16.68■□□□□ 0.26
TNFRSF1A-201ENST00000162749 BSPH1Q075Z2 132 aa16.68■□□□□ 0.26
TNFRSF1A-201ENST00000162749 LY6G6FQ5SQ64 297 aa16.68■□□□□ 0.26
TNFRSF1A-201ENST00000162749 C12orf45Q8N5I9 185 aaPredicted RBP16.68■□□□□ 0.26
TNFRSF1A-201ENST00000162749 SPERTQ8NA61 448 aa16.68■□□□□ 0.26
TNFRSF1A-201ENST00000162749 PRRT1Q99946 306 aa16.68■□□□□ 0.26
TNFRSF1A-201ENST00000162749 RHOFQ9HBH0 211 aa16.68■□□□□ 0.26
TNFRSF1A-201ENST00000162749 IGKV1D-8A0A087WSZ0 117 aa16.68■□□□□ 0.26
TNFRSF1A-201ENST00000162749 FAM90A27PA6NNH2 459 aa16.68■□□□□ 0.26
TNFRSF1A-201ENST00000162749 IFNA7P01567 189 aa16.68■□□□□ 0.26
TNFRSF1A-201ENST00000162749 DHRS2Q13268 280 aa16.68■□□□□ 0.26
TNFRSF1A-201ENST00000162749 FBXL19-AS1Q494R0 122 aa16.68■□□□□ 0.26
TNFRSF1A-201ENST00000162749 C11orf53Q8IXP5 236 aa16.68■□□□□ 0.26
TNFRSF1A-201ENST00000162749 Q8IYB0 196 aa16.68■□□□□ 0.26
TNFRSF1A-201ENST00000162749 NUP37Q8NFH4 326 aa16.68■□□□□ 0.26
TNFRSF1A-201ENST00000162749 PCNPQ8WW12 178 aaKnown RBP16.68■□□□□ 0.26
TNFRSF1A-201ENST00000162749 GTF3AQ92664 365 aaKnown RBP16.68■□□□□ 0.26
TNFRSF1A-201ENST00000162749 NRIP2Q9BQI9 281 aa16.68■□□□□ 0.26
TNFRSF1A-201ENST00000162749 TLNRD1Q9H1K6 362 aa16.68■□□□□ 0.26
TNFRSF1A-201ENST00000162749 ZNF442Q9H7R0 627 aa16.68■□□□□ 0.26
TNFRSF1A-201ENST00000162749 COQ3Q9NZJ6 369 aa16.68■□□□□ 0.26
TNFRSF1A-201ENST00000162749 EPG5Q9HCE0 2579 aa16.67■□□□□ 0.26
TNFRSF1A-201ENST00000162749 L7N2F9 121 aa16.67■□□□□ 0.26
TNFRSF1A-201ENST00000162749 SEC61A1P61619 476 aaKnown RBP16.67■□□□□ 0.26
TNFRSF1A-201ENST00000162749 ACTBL2Q562R1 376 aa16.67■□□□□ 0.26
TNFRSF1A-201ENST00000162749 VAX1Q5SQQ9 334 aa16.67■□□□□ 0.26
TNFRSF1A-201ENST00000162749 LINC00596Q86U02 117 aa16.67■□□□□ 0.26
TNFRSF1A-201ENST00000162749 MRPL37Q9BZE1 423 aaKnown RBP16.67■□□□□ 0.26
TNFRSF1A-201ENST00000162749 AUP1Q9Y679 476 aa16.67■□□□□ 0.26
TNFRSF1A-201ENST00000162749 KIAA2026Q5HYC2 2103 aa16.67■□□□□ 0.26
TNFRSF1A-201ENST00000162749 ZSCAN5BA6NJL1 495 aa16.66■□□□□ 0.26
TNFRSF1A-201ENST00000162749 HMSDA8MTL9 139 aa16.66■□□□□ 0.26
TNFRSF1A-201ENST00000162749 RGS11O94810 467 aa16.66■□□□□ 0.26
TNFRSF1A-201ENST00000162749 FCGR3AP08637 254 aa16.66■□□□□ 0.26
TNFRSF1A-201ENST00000162749 PMELP40967 661 aa16.66■□□□□ 0.26
TNFRSF1A-201ENST00000162749 ZMYND11Q15326 602 aa16.66■□□□□ 0.26
TNFRSF1A-201ENST00000162749 PRAMEF6Q5VXH4 476 aa16.66■□□□□ 0.26
TNFRSF1A-201ENST00000162749 ZNF826PQ6ZT77 177 aa16.66■□□□□ 0.26
TNFRSF1A-201ENST00000162749 OR2Z1Q8NG97 314 aa16.66■□□□□ 0.26
TNFRSF1A-201ENST00000162749 UBQLN2Q9UHD9 624 aa16.66■□□□□ 0.26
TNFRSF1A-201ENST00000162749 HCFC1P51610 2035 aa16.66■□□□□ 0.26
TNFRSF1A-201ENST00000162749 FAM221AA4D161 298 aa16.66■□□□□ 0.26
TNFRSF1A-201ENST00000162749 NKX2-6A6NCS4 301 aa16.66■□□□□ 0.26
TNFRSF1A-201ENST00000162749 ARPC5O15511 151 aa16.66■□□□□ 0.26
TNFRSF1A-201ENST00000162749 IFNA6P05013 189 aa16.66■□□□□ 0.26
TNFRSF1A-201ENST00000162749 DTYMKP23919 212 aa16.66■□□□□ 0.26
TNFRSF1A-201ENST00000162749 IL13RA2Q14627 380 aa16.66■□□□□ 0.26
TNFRSF1A-201ENST00000162749 CDSNQ15517 529 aa16.66■□□□□ 0.26
TNFRSF1A-201ENST00000162749 SLC22A25Q6T423 547 aa16.66■□□□□ 0.26
TNFRSF1A-201ENST00000162749 OR5AP2Q8NGF4 316 aa16.66■□□□□ 0.26
TNFRSF1A-201ENST00000162749 OR5H2Q8NGV7 314 aa16.66■□□□□ 0.26
TNFRSF1A-201ENST00000162749 C12orf4Q9NQ89 552 aa16.66■□□□□ 0.26
TNFRSF1A-201ENST00000162749 LRBAP50851 2863 aa16.66■□□□□ 0.26
TNFRSF1A-201ENST00000162749 OR2AT4A6NND4 320 aa16.65■□□□□ 0.26
TNFRSF1A-201ENST00000162749 ACAA1P09110 424 aaPredicted RBP16.65■□□□□ 0.26
TNFRSF1A-201ENST00000162749 TAS2R46P59540 309 aa16.65■□□□□ 0.26
TNFRSF1A-201ENST00000162749 ESCO2Q56NI9 601 aa16.65■□□□□ 0.26
TNFRSF1A-201ENST00000162749 C11orf88Q6PI97 169 aa16.65■□□□□ 0.26
TNFRSF1A-201ENST00000162749 Q6ZPA2 131 aa16.65■□□□□ 0.26
TNFRSF1A-201ENST00000162749 SLC25A42Q86VD7 318 aa16.65■□□□□ 0.26
TNFRSF1A-201ENST00000162749 ARRDC1Q8N5I2 433 aa16.65■□□□□ 0.26
TNFRSF1A-201ENST00000162749 ZBTB25P24278 435 aa16.65■□□□□ 0.26
TNFRSF1A-201ENST00000162749 SNTB1Q13884 538 aaKnown RBP16.65■□□□□ 0.26
TNFRSF1A-201ENST00000162749 CLLU1Q5K131 121 aa16.65■□□□□ 0.26
TNFRSF1A-201ENST00000162749 WDR82Q6UXN9 313 aa16.65■□□□□ 0.26
TNFRSF1A-201ENST00000162749 FN3KRPQ9HA64 309 aa16.65■□□□□ 0.26
TNFRSF1A-201ENST00000162749 UFSP2Q9NUQ7 469 aa16.65■□□□□ 0.26
TNFRSF1A-201ENST00000162749 EDARQ9UNE0 448 aa16.65■□□□□ 0.26
TNFRSF1A-201ENST00000162749 A6NLC8 198 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms