RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 LIAT1Q6ZQX7 453 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 BAP18Q8IXM2 172 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 Q8IYB0 196 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 FAM58AQ8N1B3 248 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 SUN5Q8TC36 379 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 MRPL24Q96A35 216 aaKnown RBP7.07□□□□□ -1.28
VAMP3-201ENST00000054666 RRNAD1Q96FB5 475 aaKnown RBP7.07□□□□□ -1.28
VAMP3-201ENST00000054666 IL36RNQ9UBH0 155 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 URB1O60287 2271 aaKnown RBP7.07□□□□□ -1.28
VAMP3-201ENST00000054666 A0A1W2PR80 420 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 LRP5LA4QPB2 252 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 MSGN1A6NI15 193 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 PRR33A8MZF0 331 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 K7EPK0 472 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 TAAR5O14804 337 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 BET1O15155 118 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 PHF1O43189 567 aaPredicted RBP7.07□□□□□ -1.28
VAMP3-201ENST00000054666 KCNAB3O43448 404 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 LILRA1O75019 489 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 FGF2P09038 288 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 HOXB1P14653 301 aaPredicted RBP7.07□□□□□ -1.28
VAMP3-201ENST00000054666 ZNF44P15621 663 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 WT1P19544 449 aaPredicted RBP7.07□□□□□ -1.28
VAMP3-201ENST00000054666 DAZAP2Q15038 168 aaPredicted RBP7.07□□□□□ -1.28
VAMP3-201ENST00000054666 IGSF11Q5DX21 431 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 SPIN3Q5JUX0 258 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 ZADH2Q8N4Q0 377 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 FAM71E2Q8N5Q1 922 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 SPERTQ8NA61 448 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 BVESQ8NE79 360 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 C1orf162Q8NEQ5 155 aaPredicted RBP7.07□□□□□ -1.28
VAMP3-201ENST00000054666 GTF3AQ92664 365 aaKnown RBP7.07□□□□□ -1.28
VAMP3-201ENST00000054666 CCDC120Q96HB5 630 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 CNTNAP3BQ96NU0 1288 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 ADAT1Q9BUB4 502 aaKnown RBP7.07□□□□□ -1.28
VAMP3-201ENST00000054666 RSRP1Q9BUV0 290 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 C1QTNF6Q9BXI9 259 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 CNTNAP3Q9BZ76 1288 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 DNTTIP1Q9H147 329 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 TUBD1Q9UJT1 453 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 TMA7Q9Y2S6 64 aaKnown RBP7.07□□□□□ -1.28
VAMP3-201ENST00000054666 LSM5Q9Y4Y9 91 aaKnown RBP7.07□□□□□ -1.28
VAMP3-201ENST00000054666 KCNMB2Q9Y691 235 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 TRDCB7Z8K6 153 aa7.06□□□□□ -1.28
VAMP3-201ENST00000054666 DEDDO75618 318 aa7.06□□□□□ -1.28
VAMP3-201ENST00000054666 GLAP06280 429 aa7.06□□□□□ -1.28
VAMP3-201ENST00000054666 CELA3BP08861 270 aa7.06□□□□□ -1.28
VAMP3-201ENST00000054666 RAC2P15153 192 aa7.06□□□□□ -1.28
VAMP3-201ENST00000054666 DUSP1P28562 367 aa7.06□□□□□ -1.28
VAMP3-201ENST00000054666 S100GP29377 79 aa7.06□□□□□ -1.28
VAMP3-201ENST00000054666 MDH2P40926 338 aaKnown RBP7.06□□□□□ -1.28
VAMP3-201ENST00000054666 IL15RAQ13261 267 aa7.06□□□□□ -1.28
VAMP3-201ENST00000054666 TSC22D1Q15714 1073 aa7.06□□□□□ -1.28
VAMP3-201ENST00000054666 SP6Q3SY56 376 aa7.06□□□□□ -1.28
VAMP3-201ENST00000054666 EIF5AL1Q6IS14 154 aaKnown RBP7.06□□□□□ -1.28
VAMP3-201ENST00000054666 Q6ZPA2 131 aa7.06□□□□□ -1.28
VAMP3-201ENST00000054666 EIF4E3Q8N5X7 224 aaKnown RBP7.06□□□□□ -1.28
VAMP3-201ENST00000054666 LRTM2Q8N967 370 aa7.06□□□□□ -1.28
VAMP3-201ENST00000054666 SUMF2Q8NBJ7 301 aa7.06□□□□□ -1.28
VAMP3-201ENST00000054666 OR1J1Q8NGS3 322 aa7.06□□□□□ -1.28
VAMP3-201ENST00000054666 SECTM1Q8WVN6 248 aa7.06□□□□□ -1.28
VAMP3-201ENST00000054666 WNT2BQ93097 391 aa7.06□□□□□ -1.28
VAMP3-201ENST00000054666 ZNF488Q96MN9 340 aa7.06□□□□□ -1.28
VAMP3-201ENST00000054666 OR2J1Q9GZK6 312 aa7.06□□□□□ -1.28
VAMP3-201ENST00000054666 OR51I2Q9H344 312 aa7.06□□□□□ -1.28
VAMP3-201ENST00000054666 NARFLQ9H6Q4 476 aa7.06□□□□□ -1.28
VAMP3-201ENST00000054666 PLSCR2Q9NRY7 297 aa7.06□□□□□ -1.28
VAMP3-201ENST00000054666 TAS2R3Q9NYW6 316 aa7.06□□□□□ -1.28
VAMP3-201ENST00000054666 ATP23Q9Y6H3 246 aa7.06□□□□□ -1.28
VAMP3-201ENST00000054666 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.05□□□□□ -1.28
VAMP3-201ENST00000054666 A8MXK9 166 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 TEX46H3BTG2 121 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 COX5AP20674 150 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 EIF2S3P41091 472 aaKnown RBP7.05□□□□□ -1.28
VAMP3-201ENST00000054666 NOVA1P51513 510 aaKnown RBP7.05□□□□□ -1.28
VAMP3-201ENST00000054666 ZNF169Q14929 603 aaPredicted RBP7.05□□□□□ -1.28
VAMP3-201ENST00000054666 GUSBP1Q15486 140 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 GABRA6Q16445 453 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 FIP1L1Q6UN15 594 aaKnown RBP7.05□□□□□ -1.28
VAMP3-201ENST00000054666 MEX3BQ6ZN04 569 aaKnown RBP7.05□□□□□ -1.28
VAMP3-201ENST00000054666 MOB1BQ7L9L4 216 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 MYPOPQ86VE0 399 aaPredicted RBP7.05□□□□□ -1.28
VAMP3-201ENST00000054666 FAM219AQ8IW50 185 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 OR11L1Q8NGX0 322 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 SLC25A40Q8TBP6 338 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 RNF141Q8WVD5 230 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 RDH5Q92781 318 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 LINC00052Q96N35 136 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 HS3ST6Q96QI5 342 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 PRRX2Q99811 253 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 SLC5A7Q9GZV3 580 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 OR2S2Q9NQN1 319 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 ASF1BQ9NVP2 202 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 TMED3Q9Y3Q3 217 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 EP300Q09472 2414 aaPredicted RBP7.05□□□□□ -1.28
VAMP3-201ENST00000054666 TRBV6-6A0A0A6YYG2 114 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 C3orf85A0A1B0GTC6 90 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 ZSCAN5BA6NJL1 495 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 TMEM210A6NLX4 147 aa7.05□□□□□ -1.28
VAMP3-201ENST00000054666 IQCF6A8MYZ5 107 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms