RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 DYNLT3P51808 116 aa12.11□□□□□ -0.47
USH1C-201ENST00000005226 DAZAP2Q15038 168 aaPredicted RBP12.11□□□□□ -0.47
USH1C-201ENST00000005226 ZNF674Q2M3X9 581 aa12.11□□□□□ -0.47
USH1C-201ENST00000005226 SLC25A26Q70HW3 274 aa12.11□□□□□ -0.47
USH1C-201ENST00000005226 TBC1D26Q86UD7 250 aa12.11□□□□□ -0.47
USH1C-201ENST00000005226 ODF3L1Q8IXM7 274 aa12.11□□□□□ -0.47
USH1C-201ENST00000005226 MUCL1Q96DR8 90 aa12.11□□□□□ -0.47
USH1C-201ENST00000005226 DKKL1Q9UK85 242 aa12.11□□□□□ -0.47
USH1C-201ENST00000005226 PLA2G5P39877 138 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 PMELP40967 661 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 MALLQ13021 153 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 GFI1BQ5VTD9 330 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 Q6ZSR3 168 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 FOXL2NBQ6ZUU3 175 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 ZNF695Q8IW36 515 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 TMEM252Q8N6L7 170 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 CYB561D1Q8N8Q1 229 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 Q8WTZ3 238 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 CCDC74BQ96LY2 380 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 IL36RNQ9UBH0 155 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 TRDCB7Z8K6 153 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 H3BP45 60 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 HSD17B6O14756 317 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 SCTP09683 121 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 IGFBP4P22692 258 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 RAB5CP51148 216 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 UBE2KP61086 200 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 PSG4Q00888 419 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 ZNF154Q13106 437 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 CNN3Q15417 329 aaKnown RBP12.1□□□□□ -0.47
USH1C-201ENST00000005226 IZUMO4Q1ZYL8 232 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 SLC23A3Q6PIS1 610 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 SPNS3Q6ZMD2 512 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 TOLLIPQ9H0E2 274 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 HS3ST3B1Q9Y662 390 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 A0A0G2JMM0 328 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 A0A1W2PPB8 328 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 A0A1W2PRS3 328 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 KIR3DP1A8MWS1 328 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 PDCD6O75340 191 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 LY86O95711 162 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 SRP19P09132 144 aaKnown RBP12.1□□□□□ -0.47
USH1C-201ENST00000005226 LIFP15018 202 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 TCN2P20062 427 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 ERVFRD-1P60508 538 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 DLK1P80370 383 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 EIF3IQ13347 325 aaKnown RBP12.1□□□□□ -0.47
USH1C-201ENST00000005226 PCOLCEQ15113 449 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 PYY3Q5JQD4 70 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 OR14L1PQ8NHC6 308 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 TMPRSS5Q9H3S3 457 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 C11orf1Q9H5F2 150 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 CRIM1Q9NZV1 1036 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 DOK5Q9P104 306 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 TMED3Q9Y3Q3 217 aa12.1□□□□□ -0.47
USH1C-201ENST00000005226 IGKV1D-13A0A0B4J2D9 117 aa12.09□□□□□ -0.47
USH1C-201ENST00000005226 IGKV1-13P0DP09 117 aa12.09□□□□□ -0.47
USH1C-201ENST00000005226 STARD6P59095 220 aa12.09□□□□□ -0.47
USH1C-201ENST00000005226 MRPS34P82930 218 aaKnown RBP12.09□□□□□ -0.47
USH1C-201ENST00000005226 RAB35Q15286 201 aa12.09□□□□□ -0.47
USH1C-201ENST00000005226 OR2B11Q5JQS5 317 aa12.09□□□□□ -0.47
USH1C-201ENST00000005226 ZNF818PQ6ZRF7 136 aa12.09□□□□□ -0.47
USH1C-201ENST00000005226 ZNF429Q86V71 674 aa12.09□□□□□ -0.47
USH1C-201ENST00000005226 LURAP1LQ8IV03 231 aa12.09□□□□□ -0.47
USH1C-201ENST00000005226 SELENOHQ8IZQ5 122 aaKnown RBP12.09□□□□□ -0.47
USH1C-201ENST00000005226 GAPTQ8N292 157 aa12.09□□□□□ -0.47
USH1C-201ENST00000005226 KDF1Q8NAX2 398 aaPredicted RBP12.09□□□□□ -0.47
USH1C-201ENST00000005226 MALSU1Q96EH3 234 aa12.09□□□□□ -0.47
USH1C-201ENST00000005226 TCEAL7Q9BRU2 100 aa12.09□□□□□ -0.47
USH1C-201ENST00000005226 PAPOLGQ9BWT3 736 aaKnown RBP12.09□□□□□ -0.47
USH1C-201ENST00000005226 SRFP11831 508 aa12.09□□□□□ -0.47
USH1C-201ENST00000005226 NR2C1P13056 603 aa12.09□□□□□ -0.47
USH1C-201ENST00000005226 C9orf135Q5VTT2 229 aa12.09□□□□□ -0.47
USH1C-201ENST00000005226 LHFPL2Q6ZUX7 228 aa12.09□□□□□ -0.47
USH1C-201ENST00000005226 C17orf78Q8N4C9 275 aa12.09□□□□□ -0.47
USH1C-201ENST00000005226 C10orf35Q96D05 121 aa12.09□□□□□ -0.47
USH1C-201ENST00000005226 TMEM222Q9H0R3 208 aa12.09□□□□□ -0.47
USH1C-201ENST00000005226 CHST1O43916 411 aa12.08□□□□□ -0.48
USH1C-201ENST00000005226 CCL2P13500 99 aa12.08□□□□□ -0.48
USH1C-201ENST00000005226 CCNOP22674 350 aa12.08□□□□□ -0.48
USH1C-201ENST00000005226 RBM11P57052 281 aaKnown RBP12.08□□□□□ -0.48
USH1C-201ENST00000005226 VAMP2P63027 116 aa12.08□□□□□ -0.48
USH1C-201ENST00000005226 ICAM4Q14773 271 aa12.08□□□□□ -0.48
USH1C-201ENST00000005226 TSC22D1Q15714 1073 aa12.08□□□□□ -0.48
USH1C-201ENST00000005226 HIKESHIQ53FT3 197 aa12.08□□□□□ -0.48
USH1C-201ENST00000005226 ASCL4Q6XD76 172 aa12.08□□□□□ -0.48
USH1C-201ENST00000005226 ZNF611Q8N823 705 aa12.08□□□□□ -0.48
USH1C-201ENST00000005226 CCDC71LQ8N9Z2 235 aa12.08□□□□□ -0.48
USH1C-201ENST00000005226 CCL28Q9NRJ3 127 aa12.08□□□□□ -0.48
USH1C-201ENST00000005226 CEP192Q8TEP8 1941 aa12.08□□□□□ -0.48
USH1C-201ENST00000005226 F10P00742 488 aa12.08□□□□□ -0.48
USH1C-201ENST00000005226 HOXA5P20719 270 aa12.08□□□□□ -0.48
USH1C-201ENST00000005226 FUT3P21217 361 aa12.08□□□□□ -0.48
USH1C-201ENST00000005226 RAB2AP61019 212 aa12.08□□□□□ -0.48
USH1C-201ENST00000005226 RAB1AP62820 205 aa12.08□□□□□ -0.48
USH1C-201ENST00000005226 ELOBQ15370 118 aa12.08□□□□□ -0.48
USH1C-201ENST00000005226 DPPA2Q7Z7J5 298 aa12.08□□□□□ -0.48
USH1C-201ENST00000005226 MYPOPQ86VE0 399 aaPredicted RBP12.08□□□□□ -0.48
USH1C-201ENST00000005226 EXTL1Q92935 676 aa12.08□□□□□ -0.48
USH1C-201ENST00000005226 WNT5BQ9H1J7 359 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms