RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Hoxb2P0C1T1 354 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Hapln4Q80WM4 400 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Rnf144bQ8BKD6 301 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 CebpzosQ8BTE5 80 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Foxj3Q8BUR3 623 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Gtdc1Q8BW56 445 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 C1ql2Q8CFR0 287 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Depp1Q8K2F3 205 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Trib1Q8K4K4 372 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Cuedc1Q8R3V6 388 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr99Q8VFE4 305 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Egln1Q91YE3 400 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Gorasp2Q99JX3 451 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Snu13Q9D0T1 128 aaKnown RBP7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Mrpl21Q9D1N9 209 aaKnown RBP7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Lingo1Q9D1T0 614 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Vmn1r48Q9EQ52 302 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Sfrp5Q9WU66 314 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Igkv14-111A0A140T8P9 117 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr1255A2AUA4 310 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Klri1B2KG20 248 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr225E9PWF9 419 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Vmn2r107E9PZJ7 861 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Lrp3E9Q1T6 790 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Gm12830F6XVH0 157 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 NrasP08556 189 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Wnt5aP22725 380 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 LepP41160 167 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 UevldQ3U1V6 471 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Gm5113Q3UGK8 141 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Tob1Q61471 362 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Vamp1Q62442 118 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 SprQ64105 261 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr517Q7TRU4 314 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr314Q7TRZ7 330 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Vangl1Q80Z96 526 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Gpn1Q8VCE2 372 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr1330Q8VEY6 315 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Eif2b2Q99LD9 351 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Cadm3Q99N28 396 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Mcts2Q9CQ21 181 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Defb3Q9WTL0 63 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Shank1D3YZU1 2167 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 FancmQ8BGE5 2021 aa7.52□□□□□ -1.2
Trim39-201ENSMUST00000042717 Ighv7-1A0A075B5S2 121 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Igkv5-37A0A140T8N4 115 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Gm15446D3Z5Y8 553 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Prdm14E9Q3T6 561 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Hist1h1cP15864 212 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Id1P20067 168 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 A230072I06RikQ3UUJ8 172 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Slc34a1Q60825 637 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Lcn4Q62472 185 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Slc46a1Q6PEM8 459 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 H2-M2Q6W9L1 343 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Oxa1lQ8BGA9 433 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Sp110Q8BVK9 445 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Slc1a7Q8JZR4 559 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 GmdsQ8K0C9 372 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Lgi3Q8K406 548 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Slc25a28Q8R0Z5 364 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 S1pr5Q91X56 400 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Cd209cQ91ZW9 178 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 PsenenQ9CQR7 101 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Mapk7Q9WVS8 806 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Pcnx2Q5DU28 2122 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Lrrk2Q5S006 2527 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Igkv12-89A0A0G2JGW8 112 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Tmem201A2A8U2 664 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr1234A2AVK5 314 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Rnaset2aC0HKG5 259 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Rnaset2bC0HKG6 259 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 D7Ertd443eD2J0Y4 644 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Ankrd29D3YVV3 309 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Wdr86D3Z757 380 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr68E9PYY2 315 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Ascl4M0QW46 144 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 NlkO54949 527 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Cd59aO55186 123 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 AregP31955 248 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Anxa11P97384 503 aaKnown RBP7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 St8sia4Q64692 359 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Gm10277Q6R5C6 214 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Eri1Q7TMF2 345 aaKnown RBP7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr1113Q7TR54 326 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr1061Q7TR72 313 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr657Q7TRP7 319 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Nupl2Q8CIC2 420 aaKnown RBP7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Katnal1Q8K0T4 488 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Krt33aQ8K0Y2 404 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 CmblQ8R1G2 245 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr450Q8VF81 310 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 BlvrbQ923D2 206 aaKnown RBP7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 P2ry14Q9ESG6 338 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Alyref2Q9JJW6 218 aa7.52□□□□□ -1.21
Trim39-201ENSMUST00000042717 Igkv13-84A0A140T8N3 115 aa7.51□□□□□ -1.21
Trim39-201ENSMUST00000042717 Esp16A8R0U9 85 aa7.51□□□□□ -1.21
Trim39-201ENSMUST00000042717 Gm8020F6WLE9 229 aa7.51□□□□□ -1.21
Trim39-201ENSMUST00000042717 TaglnP37804 201 aaKnown RBP7.51□□□□□ -1.21
Trim39-201ENSMUST00000042717 GalP47212 124 aa7.51□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 56.6 ms