RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Bloc1s3Q5U5M8 195 aa8.29□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Adprhl1Q8BGK2 353 aa8.29□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Zfp947Q8BIQ6 437 aa8.29□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr1453Q8VFX0 307 aa8.29□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Vmn1r63Q9EPT1 300 aa8.29□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Chrnb2Q9ERK7 501 aa8.29□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Eif3iQ9QZD9 325 aaKnown RBP8.29□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Igkv5-43A0A0B4J1J2 115 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Gm45800A0A1B0GT24 152 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Ighg2cF6TQW2 404 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Ppt2O35448 302 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 P01864 335 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Oprk1P33534 380 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Tcl1aP56280 116 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Fgf17P63075 216 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Pax5Q02650 391 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Slc39a7Q31125 476 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Il10rbQ61190 349 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 QprtQ91X91 299 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 GmppaQ922H4 420 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Spred1Q924S8 444 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Tstd3Q9D0B5 157 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Wdr4Q9EP82 413 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Plekha3Q9ERS4 297 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Gm12117V9GXK0 151 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Myh4Q5SX39 1939 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr685A0A1L1SVG7 331 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Gm4175D3YTW8 314 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr251E9Q891 316 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Gm2663F6R7E8 247 aaKnown RBP8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Vmn1r114L7N226 321 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Vmn1r126L7N2C8 321 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 HcrtO55241 130 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Slc6a1P31648 599 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Taar5Q5QD14 337 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Dtx3Q80V91 347 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Slco4c1Q8BGD4 722 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Edem2Q8BJT9 577 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Ankrd34cQ8BLB8 534 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 PigzQ8BTP0 560 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Sh2d5Q8JZW5 429 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Vmn1r202Q8R259 302 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr994Q8VF73 314 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Vmn1r51Q8VIC6 319 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 1810009J06RikQ9CPN7 247 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Barx1Q9ER42 254 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 SclyQ9JLI6 432 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Rad1Q9QWZ1 280 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Dgat2l6A2ADU8 337 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Gm14325A2AW67 498 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 H2-M10.1O19443 331 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Rps16P14131 146 aaKnown RBP8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Slc25a4P48962 298 aaKnown RBP8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Pitx2P97474 317 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Tff2Q03404 129 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 TepsinQ3U3N6 573 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Cyp1b1Q64429 543 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 St8sia1Q64687 355 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Fbxo27Q6DIA9 280 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr963Q7TRA9 311 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Xkr8Q8C0T0 401 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Ccdc187Q8C5V8 958 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Q8C784 167 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr56Q8VGD6 315 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Ms4a6dQ99N07 247 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Maf1Q9D0U6 258 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Hspb9Q9DAM3 168 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Fbp1Q9QXD6 338 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Lama4P97927 1816 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Smchd1Q6P5D8 2007 aaKnown RBP8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Zfp352A2AML7 551 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Adam34A2RSG8 714 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr66F8VQ01 311 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr1053L7MU59 313 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Zp3P10761 424 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 H1f0P10922 194 aaKnown RBP8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 FstP47931 344 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Fndc4Q3TR08 231 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Gm10644Q3TZG3 87 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Q5SPV6 233 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Adam12Q61824 903 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Fam189a1Q6A044 515 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Gprin3Q8BWS5 763 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 MdficQ8BX65 247 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 A730049H05RikQ8C940 139 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr803Q8VFI3 308 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Man2c1Q91W89 1039 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Tas2r105Q9JKT4 300 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Reep6Q9JM62 201 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Cyhr1Q9QXA1 311 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Syt6Q9R0N8 511 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Gm11214V9GX06 183 aa8.28□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Btbd35f23A0A0R4J2B9 498 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Gm765B2RVL9 189 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Gpr27O54897 379 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Gpatch2Q7TQC7 527 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Olfr487Q7TRU9 314 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Csnk1g2Q8BVP5 415 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Thoc3Q8VE80 351 aa8.27□□□□□ -1.09
Ccdc47-201ENSMUST00000002043 Olfr786Q8VFH8 312 aa8.27□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 36.1 ms