RNA–Protein interactions for RNA: ENST00000640577.1

SPIN3-242, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-242ENST00000640577 CXorf58Q96LI9 332 aa13.12□□□□□ -0.31
SPIN3-242ENST00000640577 HIST1H2AAQ96QV6 131 aa13.12□□□□□ -0.31
SPIN3-242ENST00000640577 COL25A1Q9BXS0 654 aaPredicted RBP13.12□□□□□ -0.31
SPIN3-242ENST00000640577 OPN3Q9H1Y3 402 aaPredicted RBP13.12□□□□□ -0.31
SPIN3-242ENST00000640577 NARFLQ9H6Q4 476 aa13.12□□□□□ -0.31
SPIN3-242ENST00000640577 PCDHB16Q9NRJ7 776 aa13.12□□□□□ -0.31
SPIN3-242ENST00000640577 LHX6Q9UPM6 363 aa13.12□□□□□ -0.31
SPIN3-242ENST00000640577 C5orf51A6NDU8 294 aa13.11□□□□□ -0.31
SPIN3-242ENST00000640577 IGSF11Q5DX21 431 aa13.11□□□□□ -0.31
SPIN3-242ENST00000640577 Q6ZS92 163 aa13.11□□□□□ -0.31
SPIN3-242ENST00000640577 ZNF610Q8N9Z0 462 aa13.11□□□□□ -0.31
SPIN3-242ENST00000640577 SLC25A40Q8TBP6 338 aa13.11□□□□□ -0.31
SPIN3-242ENST00000640577 STARD4Q96DR4 205 aa13.11□□□□□ -0.31
SPIN3-242ENST00000640577 SCGB3A2Q96PL1 93 aa13.11□□□□□ -0.31
SPIN3-242ENST00000640577 NECAP2Q9NVZ3 263 aa13.11□□□□□ -0.31
SPIN3-242ENST00000640577 MPC1Q9Y5U8 109 aa13.11□□□□□ -0.31
SPIN3-242ENST00000640577 RNF222A6NCQ9 220 aa13.11□□□□□ -0.31
SPIN3-242ENST00000640577 TRAPPC2LH3BP13 241 aa13.11□□□□□ -0.31
SPIN3-242ENST00000640577 SELEP16581 610 aa13.11□□□□□ -0.31
SPIN3-242ENST00000640577 SURF2Q15527 256 aaPredicted RBP13.11□□□□□ -0.31
SPIN3-242ENST00000640577 BEX5Q5H9J7 111 aa13.11□□□□□ -0.31
SPIN3-242ENST00000640577 OR6K3Q8NGY3 331 aa13.11□□□□□ -0.31
SPIN3-242ENST00000640577 TOMM40LQ969M1 308 aa13.11□□□□□ -0.31
SPIN3-242ENST00000640577 OR10C1Q96KK4 312 aa13.11□□□□□ -0.31
SPIN3-242ENST00000640577 PRRX2Q99811 253 aa13.11□□□□□ -0.31
SPIN3-242ENST00000640577 OR51I2Q9H344 312 aa13.11□□□□□ -0.31
SPIN3-242ENST00000640577 CDH20Q9HBT6 801 aa13.11□□□□□ -0.31
SPIN3-242ENST00000640577 TNFSF18Q9UNG2 199 aa13.11□□□□□ -0.31
SPIN3-242ENST00000640577 SMG1Q96Q15 3661 aaKnown RBP13.11□□□□□ -0.31
SPIN3-242ENST00000640577 TUBAL3A6NHL2 446 aa13.1□□□□□ -0.31
SPIN3-242ENST00000640577 B3GALNT1O75752 331 aa13.1□□□□□ -0.31
SPIN3-242ENST00000640577 CGAP01215 116 aa13.1□□□□□ -0.31
SPIN3-242ENST00000640577 NMBP08949 121 aa13.1□□□□□ -0.31
SPIN3-242ENST00000640577 PRKACAP17612 351 aa13.1□□□□□ -0.31
SPIN3-242ENST00000640577 FCGR2CP31995 323 aa13.1□□□□□ -0.31
SPIN3-242ENST00000640577 GNG3P63215 75 aa13.1□□□□□ -0.31
SPIN3-242ENST00000640577 NSUN5P2Q63ZY6 315 aa13.1□□□□□ -0.31
SPIN3-242ENST00000640577 TMEM65Q6PI78 240 aa13.1□□□□□ -0.31
SPIN3-242ENST00000640577 INO80CQ6PI98 192 aaPredicted RBP13.1□□□□□ -0.31
SPIN3-242ENST00000640577 CXorf67Q86X51 503 aaPredicted RBP13.1□□□□□ -0.31
SPIN3-242ENST00000640577 MKXQ8IYA7 352 aa13.1□□□□□ -0.31
SPIN3-242ENST00000640577 LRRC20Q8TCA0 184 aa13.1□□□□□ -0.31
SPIN3-242ENST00000640577 DMRTA2Q96SC8 542 aa13.1□□□□□ -0.31
SPIN3-242ENST00000640577 PLSCR4Q9NRQ2 329 aa13.1□□□□□ -0.31
SPIN3-242ENST00000640577 RCC2Q9P258 522 aaKnown RBP13.1□□□□□ -0.31
SPIN3-242ENST00000640577 ZSCAN5BA6NJL1 495 aa13.1□□□□□ -0.31
SPIN3-242ENST00000640577 AHRRA9YTQ3 701 aa13.1□□□□□ -0.31
SPIN3-242ENST00000640577 SPDEFO95238 335 aa13.1□□□□□ -0.31
SPIN3-242ENST00000640577 IGKV3-15P01624 115 aa13.1□□□□□ -0.31
SPIN3-242ENST00000640577 CRHP06850 196 aa13.1□□□□□ -0.31
SPIN3-242ENST00000640577 SLC25A4P12235 298 aa13.1□□□□□ -0.31
SPIN3-242ENST00000640577 MPV17P39210 176 aa13.1□□□□□ -0.31
SPIN3-242ENST00000640577 UCP2P55851 309 aa13.1□□□□□ -0.31
SPIN3-242ENST00000640577 FXYD4P59646 89 aa13.1□□□□□ -0.31
SPIN3-242ENST00000640577 PSG7Q13046 419 aa13.1□□□□□ -0.31
SPIN3-242ENST00000640577 PLEKHN1Q494U1 663 aaPredicted RBP13.1□□□□□ -0.31
SPIN3-242ENST00000640577 TMEM211Q6ICI0 200 aa13.1□□□□□ -0.31
SPIN3-242ENST00000640577 SCARB1Q8WTV0 552 aa13.1□□□□□ -0.31
SPIN3-242ENST00000640577 RBPMSQ93062 196 aaKnown RBP13.1□□□□□ -0.31
SPIN3-242ENST00000640577 REG4Q9BYZ8 158 aa13.1□□□□□ -0.31
SPIN3-242ENST00000640577 MBD2Q9UBB5 411 aa13.1□□□□□ -0.31
SPIN3-242ENST00000640577 OR5B21A6NL26 309 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 H0YIZ8 118 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 CNOT4O95628 575 aaKnown RBP13.09□□□□□ -0.31
SPIN3-242ENST00000640577 NAPSAO96009 420 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 FGL1Q08830 312 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 RGS7BPQ6MZT1 257 aaPredicted RBP13.09□□□□□ -0.31
SPIN3-242ENST00000640577 OR1J1Q8NGS3 322 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 RNF126Q9BV68 326 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 ZNF286AQ9HBT8 521 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 COMMD9Q9P000 198 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 C14orf166Q9Y224 244 aaKnown RBP13.09□□□□□ -0.31
SPIN3-242ENST00000640577 hCG_1807616A0A1W2PRN6 198 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 FAM90A10PA6NDY2 464 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 FAM90A18PA6NE21 464 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 FAM90A16PA6NEW6 464 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 FAM90A20PA6NIJ5 464 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 FAM90A8PA6NJQ4 464 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 FAM90A7PA6NKC0 464 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 FAM90A22PA8MWA6 464 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 FAM90A12PA8MX19 464 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 FAM90A5PA8MXJ8 464 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 FAM90A23PA8MXZ1 464 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 H0YL77 283 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 TEX46H3BTG2 121 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 WDR1O75083 606 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 CTSDP07339 412 aaPredicted RBP13.09□□□□□ -0.31
SPIN3-242ENST00000640577 FAM90A15PP0C7V4 464 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 FAM90A13PP0C7W8 464 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 FAM90A14PP0C7W9 464 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 FAM90A24PP0C7X0 464 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 CBR1P16152 277 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 RBMXP38159 391 aaKnown RBP13.09□□□□□ -0.31
SPIN3-242ENST00000640577 C20orf204Q6ZNR8 217 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 ZNF573Q86YE8 665 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 SUN5Q8TC36 379 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 RAB18Q9NP72 206 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 FAM215AQ9Y5M1 114 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 ZGRF1Q86YA3 2104 aa13.09□□□□□ -0.31
SPIN3-242ENST00000640577 A0A0B4J2A0 478 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms