RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 ZNF343Q6P1L6 599 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 MAML2Q8IZL2 1156 aaPredicted RBP9.45□□□□□ -0.9
SNIP1-204ENST00000638725 OSR2Q8N2R0 312 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 TMEM171Q8WVE6 324 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 C11orf1Q9H5F2 150 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 BCO1Q9HAY6 547 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 ST3GAL6Q9Y274 331 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 CEP290O15078 2479 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.45□□□□□ -0.9
SNIP1-204ENST00000638725 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.45□□□□□ -0.9
SNIP1-204ENST00000638725 IFITM10A6NMD0 228 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 H0YL77 283 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 LCATP04180 440 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 FBP1P09467 338 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 HTR5AP47898 357 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 RND3P61587 244 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 HIKESHIQ53FT3 197 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 C5orf24Q7Z6I8 188 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 ZIC4Q8N9L1 334 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 CCDC71LQ8N9Z2 235 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 CCDC54Q8NEL0 328 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 OR14L1PQ8NHC6 308 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 NTNG2Q96CW9 530 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 RAB39BQ96DA2 213 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 TOLLIPQ9H0E2 274 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 ZNF700Q9H0M5 742 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 MAGT1Q9H0U3 335 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 FOXD3Q9UJU5 478 aaPredicted RBP9.45□□□□□ -0.9
SNIP1-204ENST00000638725 LIPGQ9Y5X9 500 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 CFAP54Q96N23 3096 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 C3orf85A0A1B0GTC6 90 aa9.44□□□□□ -0.9
SNIP1-204ENST00000638725 SLC33A1O00400 549 aaPredicted RBP9.44□□□□□ -0.9
SNIP1-204ENST00000638725 SSSCA1O60232 199 aa9.44□□□□□ -0.9
SNIP1-204ENST00000638725 HOXA5P20719 270 aa9.44□□□□□ -0.9
SNIP1-204ENST00000638725 NKX2-1P43699 371 aaPredicted RBP9.44□□□□□ -0.9
SNIP1-204ENST00000638725 UCP3P55916 312 aa9.44□□□□□ -0.9
SNIP1-204ENST00000638725 NDUFA6P56556 154 aa9.44□□□□□ -0.9
SNIP1-204ENST00000638725 RAB2AP61019 212 aa9.44□□□□□ -0.9
SNIP1-204ENST00000638725 ZNF266Q14584 549 aa9.44□□□□□ -0.9
SNIP1-204ENST00000638725 CADM4Q8NFZ8 388 aa9.44□□□□□ -0.9
SNIP1-204ENST00000638725 GPHA2Q96T91 129 aa9.44□□□□□ -0.9
SNIP1-204ENST00000638725 URGCP-MRPS24S4R325 110 aa9.44□□□□□ -0.9
SNIP1-204ENST00000638725 CCDC163A0A0D9SF12 145 aa9.44□□□□□ -0.9
SNIP1-204ENST00000638725 TRDCB7Z8K6 153 aa9.44□□□□□ -0.9
SNIP1-204ENST00000638725 HSD17B6O14756 317 aa9.44□□□□□ -0.9
SNIP1-204ENST00000638725 ATXN7O15265 892 aaPredicted RBP9.44□□□□□ -0.9
SNIP1-204ENST00000638725 MPPED1O15442 326 aa9.44□□□□□ -0.9
SNIP1-204ENST00000638725 SYNGR3O43761 229 aa9.44□□□□□ -0.9
SNIP1-204ENST00000638725 NRASP01111 189 aa9.44□□□□□ -0.9
SNIP1-204ENST00000638725 PPYP01298 95 aa9.44□□□□□ -0.9
SNIP1-204ENST00000638725 CXCL1P09341 107 aa9.44□□□□□ -0.9
SNIP1-204ENST00000638725 TAGLN2P37802 199 aaKnown RBP9.44□□□□□ -0.9
SNIP1-204ENST00000638725 PYY3Q5JQD4 70 aa9.44□□□□□ -0.9
SNIP1-204ENST00000638725 FAM27BQ5VT28 67 aa9.44□□□□□ -0.9
SNIP1-204ENST00000638725 ZNF385CQ66K41 422 aaPredicted RBP9.44□□□□□ -0.9
SNIP1-204ENST00000638725 CDPF1Q6NVV7 123 aa9.44□□□□□ -0.9
SNIP1-204ENST00000638725 ASCL4Q6XD76 172 aa9.44□□□□□ -0.9
SNIP1-204ENST00000638725 LHFPL2Q6ZUX7 228 aa9.44□□□□□ -0.9
SNIP1-204ENST00000638725 Q8WTZ3 238 aa9.44□□□□□ -0.9
SNIP1-204ENST00000638725 GLRX2Q9NS18 164 aa9.44□□□□□ -0.9
SNIP1-204ENST00000638725 P4HTMQ9NXG6 502 aa9.44□□□□□ -0.9
SNIP1-204ENST00000638725 CA14Q9ULX7 337 aa9.44□□□□□ -0.9
SNIP1-204ENST00000638725 TP53I11O14683 189 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 PDCD6O75340 191 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 PITX3O75364 302 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 NXPH3O95157 252 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 SRP19P09132 144 aaKnown RBP9.43□□□□□ -0.9
SNIP1-204ENST00000638725 EPHA1P21709 976 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 FKBP2P26885 142 aaKnown RBP9.43□□□□□ -0.9
SNIP1-204ENST00000638725 UBE2KP61086 200 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 MRPS34P82930 218 aaKnown RBP9.43□□□□□ -0.9
SNIP1-204ENST00000638725 RUNX1Q01196 453 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 RAB35Q15286 201 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 RAB30Q15771 203 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 OR2B11Q5JQS5 317 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 CXorf66Q5JRM2 361 aaPredicted RBP9.43□□□□□ -0.9
SNIP1-204ENST00000638725 C9orf152Q5JTZ5 239 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 TMEM252Q8N6L7 170 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 PAPOLGQ9BWT3 736 aaKnown RBP9.43□□□□□ -0.9
SNIP1-204ENST00000638725 ZNF442Q9H7R0 627 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 SLC7A11Q9UPY5 501 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 A0A0J9YW62 118 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 TNFSF11O14788 317 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 CST7O76096 145 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 CDS2O95674 445 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 CCL3P10147 92 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 DLK1P80370 383 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 MALLQ13021 153 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 ZNF674Q2M3X9 581 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 ODF3L1Q8IXM7 274 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 TMEM217Q8N7C4 229 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 OR5C1Q8NGR4 320 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 SRXN1Q9BYN0 137 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 TMEM222Q9H0R3 208 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 SMDT1Q9H4I9 107 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 DOK5Q9P104 306 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 KIAA1456Q9P272 454 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 RARRES3Q9UL19 164 aa9.43□□□□□ -0.9
SNIP1-204ENST00000638725 UBE2J1Q9Y385 318 aaPredicted RBP9.43□□□□□ -0.9
SNIP1-204ENST00000638725 PROB1E7EW31 1015 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms