RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 GPR27Q9NS67 375 aa16.35■□□□□ 0.21
SCARB2-213ENST00000638680 BET1LQ9NYM9 111 aa16.35■□□□□ 0.21
SCARB2-213ENST00000638680 MICBQ29980 383 aa16.35■□□□□ 0.21
SCARB2-213ENST00000638680 OR4F17Q8NGA8 305 aa16.35■□□□□ 0.21
SCARB2-213ENST00000638680 OR10D3Q8NH80 312 aa16.35■□□□□ 0.21
SCARB2-213ENST00000638680 GPBAR1Q8TDU6 330 aa16.35■□□□□ 0.21
SCARB2-213ENST00000638680 CHAC2Q8WUX2 184 aa16.35■□□□□ 0.21
SCARB2-213ENST00000638680 CELA2BP08218 269 aaPredicted RBP16.34■□□□□ 0.21
SCARB2-213ENST00000638680 S100A4P26447 101 aaKnown RBP16.34■□□□□ 0.21
SCARB2-213ENST00000638680 GALNSP34059 522 aa16.34■□□□□ 0.21
SCARB2-213ENST00000638680 OR3A1P47881 315 aa16.34■□□□□ 0.21
SCARB2-213ENST00000638680 TGIF2LXQ8IUE1 241 aa16.34■□□□□ 0.21
SCARB2-213ENST00000638680 ZNF764Q96H86 408 aaPredicted RBP16.34■□□□□ 0.21
SCARB2-213ENST00000638680 TMEM9BQ9NQ34 198 aa16.34■□□□□ 0.21
SCARB2-213ENST00000638680 MYH14Q7Z406 1995 aaKnown RBP16.34■□□□□ 0.21
SCARB2-213ENST00000638680 GSX1Q9H4S2 264 aaPredicted RBP16.34■□□□□ 0.21
SCARB2-213ENST00000638680 ELF5Q9UKW6 265 aaPredicted RBP16.34■□□□□ 0.21
SCARB2-213ENST00000638680 CRISP2P16562 243 aa16.34■□□□□ 0.21
SCARB2-213ENST00000638680 Q56UQ5 140 aa16.34■□□□□ 0.21
SCARB2-213ENST00000638680 FNDC7Q5VTL7 733 aa16.34■□□□□ 0.21
SCARB2-213ENST00000638680 MBD1Q9UIS9 605 aaPredicted RBP16.34■□□□□ 0.21
SCARB2-213ENST00000638680 NCBP2LA6PVI3 153 aaKnown RBP16.34■□□□□ 0.21
SCARB2-213ENST00000638680 NEURL1O76050 574 aa16.34■□□□□ 0.21
SCARB2-213ENST00000638680 HLA-BQ31612 363 aa16.34■□□□□ 0.21
SCARB2-213ENST00000638680 LHFPL5Q8TAF8 219 aa16.34■□□□□ 0.21
SCARB2-213ENST00000638680 SYNGR2O43760 224 aa16.34■□□□□ 0.21
SCARB2-213ENST00000638680 SMAD4Q13485 552 aaKnown RBP16.34■□□□□ 0.21
SCARB2-213ENST00000638680 RNPS1Q15287 305 aaKnown RBP16.34■□□□□ 0.21
SCARB2-213ENST00000638680 ZPBPQ9BS86 351 aa16.34■□□□□ 0.21
SCARB2-213ENST00000638680 SH2D2AQ9NP31 389 aa16.34■□□□□ 0.21
SCARB2-213ENST00000638680 OR4C45A6NMZ5 311 aa16.33■□□□□ 0.21
SCARB2-213ENST00000638680 C11orf94C9JXX5 98 aa16.33■□□□□ 0.21
SCARB2-213ENST00000638680 M0R2Z0 102 aa16.33■□□□□ 0.21
SCARB2-213ENST00000638680 GEMIN2O14893 280 aaKnown RBP16.33■□□□□ 0.21
SCARB2-213ENST00000638680 ZNF205O95201 554 aa16.33■□□□□ 0.21
SCARB2-213ENST00000638680 ITGBL1O95965 494 aaPredicted RBP16.33■□□□□ 0.21
SCARB2-213ENST00000638680 EFNB2P52799 333 aa16.33■□□□□ 0.21
SCARB2-213ENST00000638680 C1QTNF12Q5T7M4 302 aa16.33■□□□□ 0.21
SCARB2-213ENST00000638680 GUSBP11Q6P575 273 aa16.33■□□□□ 0.21
SCARB2-213ENST00000638680 OR6X1Q8NH79 312 aa16.33■□□□□ 0.21
SCARB2-213ENST00000638680 FAM60AQ9NP50 221 aa16.33■□□□□ 0.21
SCARB2-213ENST00000638680 SPINK2P20155 84 aa16.33■□□□□ 0.2
SCARB2-213ENST00000638680 KIR2DS2P43631 304 aa16.33■□□□□ 0.2
SCARB2-213ENST00000638680 MNX1P50219 401 aaPredicted RBP16.33■□□□□ 0.2
SCARB2-213ENST00000638680 PSG6Q00889 435 aa16.33■□□□□ 0.2
SCARB2-213ENST00000638680 GPA33Q99795 319 aa16.33■□□□□ 0.2
SCARB2-213ENST00000638680 TRDCB7Z8K6 153 aa16.33■□□□□ 0.2
SCARB2-213ENST00000638680 IGHV3-13P01766 116 aa16.33■□□□□ 0.2
SCARB2-213ENST00000638680 IGHV3-7P01780 117 aa16.33■□□□□ 0.2
SCARB2-213ENST00000638680 OR10A7Q8NGE5 316 aa16.33■□□□□ 0.2
SCARB2-213ENST00000638680 SLC52A3Q9NQ40 469 aa16.33■□□□□ 0.2
SCARB2-213ENST00000638680 OR1A1Q9P1Q5 309 aa16.33■□□□□ 0.2
SCARB2-213ENST00000638680 PCDHGA9Q9Y5G4 932 aaKnown RBP16.33■□□□□ 0.2
SCARB2-213ENST00000638680 SP1P08047 785 aa16.33■□□□□ 0.2
SCARB2-213ENST00000638680 TRAT1Q6PIZ9 186 aa16.33■□□□□ 0.2
SCARB2-213ENST00000638680 NHSQ6T4R5 1651 aa16.32■□□□□ 0.2
SCARB2-213ENST00000638680 H3BQ15 152 aa16.32■□□□□ 0.2
SCARB2-213ENST00000638680 MFNGO00587 321 aa16.32■□□□□ 0.2
SCARB2-213ENST00000638680 RAB7AP51149 207 aa16.32■□□□□ 0.2
SCARB2-213ENST00000638680 GAPTQ8N292 157 aa16.32■□□□□ 0.2
SCARB2-213ENST00000638680 B4DEV8 164 aa16.32■□□□□ 0.2
SCARB2-213ENST00000638680 EWSR1Q01844 656 aaKnown RBP eCLIP16.32■□□□□ 0.2
SCARB2-213ENST00000638680 VSIG4Q9Y279 399 aa16.32■□□□□ 0.2
SCARB2-213ENST00000638680 ZNF880Q6PDB4 577 aa16.32■□□□□ 0.2
SCARB2-213ENST00000638680 SPEM1Q8N4L4 309 aa16.32■□□□□ 0.2
SCARB2-213ENST00000638680 LRRC29Q8WV35 223 aa16.32■□□□□ 0.2
SCARB2-213ENST00000638680 ASB5Q8WWX0 329 aa16.32■□□□□ 0.2
SCARB2-213ENST00000638680 ZNF107Q9UII5 783 aaPredicted RBP16.32■□□□□ 0.2
SCARB2-213ENST00000638680 TCL1AP56279 114 aa16.32■□□□□ 0.2
SCARB2-213ENST00000638680 FBXO17Q96EF6 278 aa16.32■□□□□ 0.2
SCARB2-213ENST00000638680 PARP11Q9NR21 331 aa16.32■□□□□ 0.2
SCARB2-213ENST00000638680 F12P00748 615 aaPredicted RBP16.32■□□□□ 0.2
SCARB2-213ENST00000638680 TNFRSF1AP19438 455 aa16.32■□□□□ 0.2
SCARB2-213ENST00000638680 LRP11Q86VZ4 500 aa16.32■□□□□ 0.2
SCARB2-213ENST00000638680 FUT9Q9Y231 359 aa16.32■□□□□ 0.2
SCARB2-213ENST00000638680 IGHV1OR21-1A0A087WYE8 117 aa16.31■□□□□ 0.2
SCARB2-213ENST00000638680 KCNAB3O43448 404 aa16.31■□□□□ 0.2
SCARB2-213ENST00000638680 C1QCP02747 245 aa16.31■□□□□ 0.2
SCARB2-213ENST00000638680 RPS4Y1P22090 263 aaKnown RBP16.31■□□□□ 0.2
SCARB2-213ENST00000638680 CTGFP29279 349 aa16.31■□□□□ 0.2
SCARB2-213ENST00000638680 DRD3P35462 400 aa16.31■□□□□ 0.2
SCARB2-213ENST00000638680 ZNF83P51522 516 aa16.31■□□□□ 0.2
SCARB2-213ENST00000638680 LILRA6Q6PI73 481 aa16.31■□□□□ 0.2
SCARB2-213ENST00000638680 VSTM2LQ96N03 204 aa16.31■□□□□ 0.2
SCARB2-213ENST00000638680 VAX2Q9UIW0 290 aa16.31■□□□□ 0.2
SCARB2-213ENST00000638680 ZAR1Q86SH2 424 aa16.31■□□□□ 0.2
SCARB2-213ENST00000638680 OR10G8Q8NGN5 311 aa16.31■□□□□ 0.2
SCARB2-213ENST00000638680 ONECUT1Q9UBC0 465 aa16.31■□□□□ 0.2
SCARB2-213ENST00000638680 ST6GALNAC2Q9UJ37 374 aa16.31■□□□□ 0.2
SCARB2-213ENST00000638680 BCL3P20749 454 aa16.31■□□□□ 0.2
SCARB2-213ENST00000638680 TNFSF18Q9UNG2 199 aa16.31■□□□□ 0.2
SCARB2-213ENST00000638680 CXCL2P19875 107 aa16.31■□□□□ 0.2
SCARB2-213ENST00000638680 HLA-DRB5Q30154 266 aa16.31■□□□□ 0.2
SCARB2-213ENST00000638680 LYZL2Q7Z4W2 148 aa16.31■□□□□ 0.2
SCARB2-213ENST00000638680 OR1L6Q8NGR2 347 aa16.31■□□□□ 0.2
SCARB2-213ENST00000638680 DCAF16Q9NXF7 216 aa16.31■□□□□ 0.2
SCARB2-213ENST00000638680 FKBP11Q9NYL4 201 aa16.31■□□□□ 0.2
SCARB2-213ENST00000638680 MEOX1P50221 254 aa16.3■□□□□ 0.2
SCARB2-213ENST00000638680 SLC26A10Q8NG04 563 aa16.3■□□□□ 0.2
SCARB2-213ENST00000638680 HOXC4P09017 264 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms