RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 CLN8Q9UBY8 286 aa16.12■□□□□ 0.17
HLA-A-209ENST00000638375 GLS2Q9UI32 602 aa16.12■□□□□ 0.17
HLA-A-209ENST00000638375 DAPK2Q9UIK4 370 aa16.12■□□□□ 0.17
HLA-A-209ENST00000638375 CEPT1Q9Y6K0 416 aa16.12■□□□□ 0.17
HLA-A-209ENST00000638375 YLPM1P49750 1951 aaKnown RBP16.11■□□□□ 0.17
HLA-A-209ENST00000638375 MAST4O15021 2626 aa16.11■□□□□ 0.17
HLA-A-209ENST00000638375 SH2D1BO14796 132 aa16.11■□□□□ 0.17
HLA-A-209ENST00000638375 GEMIN2O14893 280 aaKnown RBP16.11■□□□□ 0.17
HLA-A-209ENST00000638375 NDUFB3O43676 98 aa16.11■□□□□ 0.17
HLA-A-209ENST00000638375 PSPNO60542 156 aa16.11■□□□□ 0.17
HLA-A-209ENST00000638375 GZMKP49863 264 aa16.11■□□□□ 0.17
HLA-A-209ENST00000638375 GNB2P62879 340 aa16.11■□□□□ 0.17
HLA-A-209ENST00000638375 LCN2P80188 198 aa16.11■□□□□ 0.17
HLA-A-209ENST00000638375 PLA2G7Q13093 441 aa16.11■□□□□ 0.17
HLA-A-209ENST00000638375 TAF9Q16594 264 aa16.11■□□□□ 0.17
HLA-A-209ENST00000638375 C17orf107Q6ZR85 190 aa16.11■□□□□ 0.17
HLA-A-209ENST00000638375 OR2W3Q7Z3T1 314 aa16.11■□□□□ 0.17
HLA-A-209ENST00000638375 LINC01356Q8N9X3 169 aa16.11■□□□□ 0.17
HLA-A-209ENST00000638375 KCNG3Q8TAE7 436 aa16.11■□□□□ 0.17
HLA-A-209ENST00000638375 ST8SIA4Q92187 359 aa16.11■□□□□ 0.17
HLA-A-209ENST00000638375 Q96M66 194 aa16.11■□□□□ 0.17
HLA-A-209ENST00000638375 SELENOIQ9C0D9 397 aa16.11■□□□□ 0.17
HLA-A-209ENST00000638375 RBM38Q9H0Z9 239 aaKnown RBP16.11■□□□□ 0.17
HLA-A-209ENST00000638375 SLC25A10Q9UBX3 287 aaPredicted RBP16.11■□□□□ 0.17
HLA-A-209ENST00000638375 TMEM272A0A1B0GTI8 110 aa16.1■□□□□ 0.17
HLA-A-209ENST00000638375 B4DSR2 109 aa16.1■□□□□ 0.17
HLA-A-209ENST00000638375 DEGS1O15121 323 aa16.1■□□□□ 0.17
HLA-A-209ENST00000638375 FOXH1O75593 365 aa16.1■□□□□ 0.17
HLA-A-209ENST00000638375 ZNF44P15621 663 aa16.1■□□□□ 0.17
HLA-A-209ENST00000638375 ZNF16P17020 682 aaPredicted RBP16.1■□□□□ 0.17
HLA-A-209ENST00000638375 LMO1P25800 156 aa16.1■□□□□ 0.17
HLA-A-209ENST00000638375 NPY4RP50391 375 aa16.1■□□□□ 0.17
HLA-A-209ENST00000638375 RPS27AP62979 156 aaKnown RBP16.1■□□□□ 0.17
HLA-A-209ENST00000638375 SCN1BQ07699 218 aa16.1■□□□□ 0.17
HLA-A-209ENST00000638375 SPCS2Q15005 226 aa16.1■□□□□ 0.17
HLA-A-209ENST00000638375 LRRC10Q5BKY1 277 aa16.1■□□□□ 0.17
HLA-A-209ENST00000638375 USP43Q70EL4 1123 aa16.1■□□□□ 0.17
HLA-A-209ENST00000638375 ASCC1Q8N9N2 400 aaKnown RBP16.1■□□□□ 0.17
HLA-A-209ENST00000638375 ISOC1Q96CN7 298 aa16.1■□□□□ 0.17
HLA-A-209ENST00000638375 SMR3AQ99954 134 aa16.1■□□□□ 0.17
HLA-A-209ENST00000638375 BCL7BQ9BQE9 202 aa16.1■□□□□ 0.17
HLA-A-209ENST00000638375 TMEM59Q9BXS4 323 aa16.1■□□□□ 0.17
HLA-A-209ENST00000638375 SHARPINQ9H0F6 387 aa16.1■□□□□ 0.17
HLA-A-209ENST00000638375 DCSTAMPQ9H295 470 aa16.1■□□□□ 0.17
HLA-A-209ENST00000638375 FBLN5Q9UBX5 448 aa16.1■□□□□ 0.17
HLA-A-209ENST00000638375 OR5V1Q9UGF6 321 aa16.1■□□□□ 0.17
HLA-A-209ENST00000638375 MALRD1Q5VYJ5 2156 aa16.1■□□□□ 0.17
HLA-A-209ENST00000638375 TRAV24A0A0B4J272 114 aa16.09■□□□□ 0.17
HLA-A-209ENST00000638375 C22orf46C9J442 243 aa16.09■□□□□ 0.17
HLA-A-209ENST00000638375 K7N7A8 449 aa16.09■□□□□ 0.17
HLA-A-209ENST00000638375 SLC33A1O00400 549 aaPredicted RBP16.09■□□□□ 0.17
HLA-A-209ENST00000638375 TK1P04183 234 aa16.09■□□□□ 0.17
HLA-A-209ENST00000638375 MSMBP08118 114 aa16.09■□□□□ 0.17
HLA-A-209ENST00000638375 SNRPBP14678 240 aaKnown RBP16.09■□□□□ 0.17
HLA-A-209ENST00000638375 FOSL1P15407 271 aa16.09■□□□□ 0.17
HLA-A-209ENST00000638375 IDNKQ5T6J7 187 aa16.09■□□□□ 0.17
HLA-A-209ENST00000638375 CYB5R2Q6BCY4 276 aa16.09■□□□□ 0.17
HLA-A-209ENST00000638375 LINC00596Q86U02 117 aa16.09■□□□□ 0.17
HLA-A-209ENST00000638375 OR4S1Q8NGB4 309 aa16.09■□□□□ 0.17
HLA-A-209ENST00000638375 SLC25A46Q96AG3 418 aa16.09■□□□□ 0.17
HLA-A-209ENST00000638375 SNX22Q96L94 193 aa16.09■□□□□ 0.17
HLA-A-209ENST00000638375 TM2D1Q9BX74 207 aa16.09■□□□□ 0.17
HLA-A-209ENST00000638375 BARHL1Q9BZE3 327 aa16.09■□□□□ 0.17
HLA-A-209ENST00000638375 FAM234AQ9H0X4 552 aa16.09■□□□□ 0.17
HLA-A-209ENST00000638375 LPAR5Q9H1C0 372 aa16.09■□□□□ 0.17
HLA-A-209ENST00000638375 IFT22Q9H7X7 185 aa16.09■□□□□ 0.17
HLA-A-209ENST00000638375 POLR3KQ9Y2Y1 108 aaPredicted RBP16.09■□□□□ 0.17
HLA-A-209ENST00000638375 CELSR1Q9NYQ6 3014 aa16.08■□□□□ 0.17
HLA-A-209ENST00000638375 ACANP16112 2415 aa16.08■□□□□ 0.17
HLA-A-209ENST00000638375 A0A0A6YYD4 124 aa16.08■□□□□ 0.16
HLA-A-209ENST00000638375 H3BMQ9 156 aa16.08■□□□□ 0.16
HLA-A-209ENST00000638375 OR7C1O76099 320 aaPredicted RBP16.08■□□□□ 0.16
HLA-A-209ENST00000638375 PAHP00439 452 aa16.08■□□□□ 0.16
HLA-A-209ENST00000638375 NDUFB7P17568 137 aa16.08■□□□□ 0.16
HLA-A-209ENST00000638375 GABRR1P24046 479 aa16.08■□□□□ 0.16
HLA-A-209ENST00000638375 RANBP1P43487 201 aa16.08■□□□□ 0.16
HLA-A-209ENST00000638375 OR3A1P47881 315 aa16.08■□□□□ 0.16
HLA-A-209ENST00000638375 EFNB2P52799 333 aa16.08■□□□□ 0.16
HLA-A-209ENST00000638375 PAX2Q02962 417 aa16.08■□□□□ 0.16
HLA-A-209ENST00000638375 MPV17LQ2QL34 196 aa16.08■□□□□ 0.16
HLA-A-209ENST00000638375 SIGIRRQ6IA17 410 aa16.08■□□□□ 0.16
HLA-A-209ENST00000638375 CHST4Q8NCG5 386 aa16.08■□□□□ 0.16
HLA-A-209ENST00000638375 DACT3Q96B18 629 aaPredicted RBP16.08■□□□□ 0.16
HLA-A-209ENST00000638375 CYYR1Q96J86 154 aa16.08■□□□□ 0.16
HLA-A-209ENST00000638375 NICN1Q9BSH3 213 aa16.08■□□□□ 0.16
HLA-A-209ENST00000638375 CHST6Q9GZX3 395 aa16.08■□□□□ 0.16
HLA-A-209ENST00000638375 MMP26Q9NRE1 261 aa16.08■□□□□ 0.16
HLA-A-209ENST00000638375 FAM90A10PA6NDY2 464 aa16.07■□□□□ 0.16
HLA-A-209ENST00000638375 FAM90A18PA6NE21 464 aa16.07■□□□□ 0.16
HLA-A-209ENST00000638375 FAM90A16PA6NEW6 464 aa16.07■□□□□ 0.16
HLA-A-209ENST00000638375 FAM90A20PA6NIJ5 464 aa16.07■□□□□ 0.16
HLA-A-209ENST00000638375 FAM90A8PA6NJQ4 464 aa16.07■□□□□ 0.16
HLA-A-209ENST00000638375 FAM90A7PA6NKC0 464 aa16.07■□□□□ 0.16
HLA-A-209ENST00000638375 FAM90A22PA8MWA6 464 aa16.07■□□□□ 0.16
HLA-A-209ENST00000638375 FAM90A12PA8MX19 464 aa16.07■□□□□ 0.16
HLA-A-209ENST00000638375 FAM90A5PA8MXJ8 464 aa16.07■□□□□ 0.16
HLA-A-209ENST00000638375 FAM90A23PA8MXZ1 464 aa16.07■□□□□ 0.16
HLA-A-209ENST00000638375 TGFAP01135 160 aa16.07■□□□□ 0.16
HLA-A-209ENST00000638375 FAM90A15PP0C7V4 464 aa16.07■□□□□ 0.16
HLA-A-209ENST00000638375 FAM90A13PP0C7W8 464 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms