RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 IL36GQ9NZH8 169 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.53□□□□□ -0.24
UBE3A-227ENST00000638011 RAB29O14966 203 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 PFN3P60673 137 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 TCTN3Q6NUS6 607 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 P2RX4Q99571 388 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 PLXNA1Q9UIW2 1896 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.53□□□□□ -0.24
UBE3A-227ENST00000638011 C5orf49A4QMS7 147 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 ARG1P05089 322 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 CBLN2Q8IUK8 224 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 RBM14Q96PK6 669 aaKnown RBP13.53□□□□□ -0.24
UBE3A-227ENST00000638011 KIR3DX1Q9H7L2 352 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 IL4P05112 153 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 CYBAP13498 195 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 AVPR2P30518 371 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 TMEM215Q68D42 235 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 SLC39A5Q6ZMH5 540 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 LINC00596Q86U02 117 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 TBC1D26Q86UD7 250 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 SNRNP40Q96DI7 357 aaKnown RBP13.53□□□□□ -0.24
UBE3A-227ENST00000638011 PLPP1O14494 284 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 PPIAP62937 165 aaKnown RBP13.53□□□□□ -0.24
UBE3A-227ENST00000638011 HFEQ30201 348 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 ZNF385CQ66K41 422 aaPredicted RBP13.53□□□□□ -0.24
UBE3A-227ENST00000638011 SLC25A26Q70HW3 274 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 OR10AG1Q8NH19 301 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 ABHD14BQ96IU4 210 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 GNG3P63215 75 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 KLRB1Q12918 225 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 SYT11Q9BT88 431 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 NAV3Q8IVL0 2385 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 H3BP45 60 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 PAPPA-AS1Q5QFB9 102 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 DNLZQ5SXM8 178 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 XAF1Q6GPH4 301 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 MAMSTRQ6ZN01 415 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 SLC25A42Q86VD7 318 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 SLC52A3Q9NQ40 469 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 IL19Q9UHD0 177 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 MOB4Q9Y3A3 225 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 TMPRSS11DO60235 418 aa13.52□□□□□ -0.24
UBE3A-227ENST00000638011 SPNP16150 400 aa13.52□□□□□ -0.24
UBE3A-227ENST00000638011 ACSM5Q6NUN0 579 aa13.52□□□□□ -0.24
UBE3A-227ENST00000638011 FAM219AQ8IW50 185 aa13.52□□□□□ -0.24
UBE3A-227ENST00000638011 OR2I1PQ8NGU4 316 aa13.52□□□□□ -0.24
UBE3A-227ENST00000638011 RBFOX2O43251 390 aaKnown RBP eCLIP13.52□□□□□ -0.24
UBE3A-227ENST00000638011 SMIM13P0DJ93 91 aa13.52□□□□□ -0.24
UBE3A-227ENST00000638011 DYNLT3P51808 116 aa13.52□□□□□ -0.24
UBE3A-227ENST00000638011 MRPS21P82921 87 aaKnown RBP13.52□□□□□ -0.24
UBE3A-227ENST00000638011 HOXB1P14653 301 aaPredicted RBP13.52□□□□□ -0.24
UBE3A-227ENST00000638011 PRELID3AQ96N28 172 aa13.52□□□□□ -0.24
UBE3A-227ENST00000638011 CD40P25942 277 aa13.52□□□□□ -0.25
UBE3A-227ENST00000638011 B4E171 279 aa13.52□□□□□ -0.25
UBE3A-227ENST00000638011 PPP6CO00743 305 aa13.52□□□□□ -0.25
UBE3A-227ENST00000638011 PI3P19957 117 aa13.52□□□□□ -0.25
UBE3A-227ENST00000638011 CD38P28907 300 aa13.52□□□□□ -0.25
UBE3A-227ENST00000638011 KIR3DL2P43630 455 aa13.52□□□□□ -0.25
UBE3A-227ENST00000638011 LINC00518Q8N0U6 118 aa13.52□□□□□ -0.25
UBE3A-227ENST00000638011 BHLHE23Q8NDY6 225 aa13.52□□□□□ -0.25
UBE3A-227ENST00000638011 RAB33BQ9H082 229 aa13.52□□□□□ -0.25
UBE3A-227ENST00000638011 TREM2Q9NZC2 230 aa13.52□□□□□ -0.25
UBE3A-227ENST00000638011 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.52□□□□□ -0.25
UBE3A-227ENST00000638011 EML6Q6ZMW3 1958 aa13.52□□□□□ -0.25
UBE3A-227ENST00000638011 PTPRFP10586 1907 aa13.52□□□□□ -0.25
UBE3A-227ENST00000638011 UBALD2Q8IYN6 164 aa13.52□□□□□ -0.25
UBE3A-227ENST00000638011 SGMS2Q8NHU3 365 aa13.52□□□□□ -0.25
UBE3A-227ENST00000638011 MBNL1Q9NR56 388 aaKnown RBP13.52□□□□□ -0.25
UBE3A-227ENST00000638011 RGPD3A6NKT7 1758 aaPredicted RBP13.52□□□□□ -0.25
UBE3A-227ENST00000638011 RGPD4Q7Z3J3 1758 aa13.52□□□□□ -0.25
UBE3A-227ENST00000638011 LIM2P55344 173 aa13.52□□□□□ -0.25
UBE3A-227ENST00000638011 ZNF816Q0VGE8 651 aaPredicted RBP13.52□□□□□ -0.25
UBE3A-227ENST00000638011 OR1P1Q8NH06 330 aa13.52□□□□□ -0.25
UBE3A-227ENST00000638011 MZB1Q8WU39 189 aa13.52□□□□□ -0.25
UBE3A-227ENST00000638011 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.51□□□□□ -0.25
UBE3A-227ENST00000638011 BCDIN3DQ7Z5W3 292 aaKnown RBP13.51□□□□□ -0.25
UBE3A-227ENST00000638011 NBASA2RRP1 2371 aa13.51□□□□□ -0.25
UBE3A-227ENST00000638011 BCL2P10415 239 aa13.51□□□□□ -0.25
UBE3A-227ENST00000638011 PITX1P78337 314 aaPredicted RBP13.51□□□□□ -0.25
UBE3A-227ENST00000638011 JKAMPQ9P055 326 aa13.51□□□□□ -0.25
UBE3A-227ENST00000638011 PPT2Q9UMR5 302 aa13.51□□□□□ -0.25
UBE3A-227ENST00000638011 SIGLEC5O15389 551 aa13.51□□□□□ -0.25
UBE3A-227ENST00000638011 ATF1P18846 271 aa13.51□□□□□ -0.25
UBE3A-227ENST00000638011 BCORQ6W2J9 1755 aa13.51□□□□□ -0.25
UBE3A-227ENST00000638011 ANKRD20A5PA0PJZ0 165 aa13.51□□□□□ -0.25
UBE3A-227ENST00000638011 TMEM25Q86YD3 366 aa13.51□□□□□ -0.25
UBE3A-227ENST00000638011 TGIF2LXQ8IUE1 241 aa13.51□□□□□ -0.25
UBE3A-227ENST00000638011 RBM45Q8IUH3 476 aaKnown RBP13.51□□□□□ -0.25
UBE3A-227ENST00000638011 OR5R1Q8NH85 324 aa13.51□□□□□ -0.25
UBE3A-227ENST00000638011 TINAGL1Q9GZM7 467 aaPredicted RBP13.51□□□□□ -0.25
UBE3A-227ENST00000638011 A0A0B4J293 547 aa13.51□□□□□ -0.25
UBE3A-227ENST00000638011 METRNLQ641Q3 311 aa13.51□□□□□ -0.25
UBE3A-227ENST00000638011 RNF133Q8WVZ7 376 aa13.51□□□□□ -0.25
UBE3A-227ENST00000638011 CDX1P47902 265 aaPredicted RBP13.51□□□□□ -0.25
UBE3A-227ENST00000638011 JAG1P78504 1218 aa13.51□□□□□ -0.25
UBE3A-227ENST00000638011 SAPCD1Q5SSQ6 148 aa13.51□□□□□ -0.25
UBE3A-227ENST00000638011 RDH5Q92781 318 aa13.51□□□□□ -0.25
UBE3A-227ENST00000638011 PSMG3Q9BT73 122 aaPredicted RBP13.51□□□□□ -0.25
UBE3A-227ENST00000638011 CES1P1Q9UKY3 287 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms