RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 NDUFB3O43676 98 aa13.29□□□□□ -0.28
CLN6-216ENST00000636876 FOXH1O75593 365 aa13.29□□□□□ -0.28
CLN6-216ENST00000636876 MPIG6BO95866 241 aa13.29□□□□□ -0.28
CLN6-216ENST00000636876 OR2H2O95918 312 aa13.29□□□□□ -0.28
CLN6-216ENST00000636876 SLC2A2P11168 524 aaPredicted RBP13.29□□□□□ -0.28
CLN6-216ENST00000636876 ARSBP15848 533 aa13.29□□□□□ -0.28
CLN6-216ENST00000636876 ZFP36P26651 326 aaKnown RBP13.29□□□□□ -0.28
CLN6-216ENST00000636876 RPS19P39019 145 aaKnown RBP13.29□□□□□ -0.28
CLN6-216ENST00000636876 NPY4RP50391 375 aa13.29□□□□□ -0.28
CLN6-216ENST00000636876 TMBIM6P55061 237 aa13.29□□□□□ -0.28
CLN6-216ENST00000636876 GNB2P62879 340 aa13.29□□□□□ -0.28
CLN6-216ENST00000636876 IKZF1Q13422 519 aa13.29□□□□□ -0.28
CLN6-216ENST00000636876 UNC119Q13432 240 aa13.29□□□□□ -0.28
CLN6-216ENST00000636876 BLMHQ13867 455 aa13.29□□□□□ -0.28
CLN6-216ENST00000636876 LRRC10Q5BKY1 277 aa13.29□□□□□ -0.28
CLN6-216ENST00000636876 OR10K2Q6IF99 312 aa13.29□□□□□ -0.28
CLN6-216ENST00000636876 OR2W3Q7Z3T1 314 aa13.29□□□□□ -0.28
CLN6-216ENST00000636876 FGFRL1Q8N441 504 aa13.29□□□□□ -0.28
CLN6-216ENST00000636876 LINC01356Q8N9X3 169 aa13.29□□□□□ -0.28
CLN6-216ENST00000636876 ZNRF1Q8ND25 227 aa13.29□□□□□ -0.28
CLN6-216ENST00000636876 KCNG3Q8TAE7 436 aa13.29□□□□□ -0.28
CLN6-216ENST00000636876 RAB2BQ8WUD1 216 aa13.29□□□□□ -0.28
CLN6-216ENST00000636876 FAM46BQ96A09 425 aa13.29□□□□□ -0.28
CLN6-216ENST00000636876 MSI2Q96DH6 328 aaKnown RBP13.29□□□□□ -0.28
CLN6-216ENST00000636876 Q96M66 194 aa13.29□□□□□ -0.28
CLN6-216ENST00000636876 BCL7BQ9BQE9 202 aa13.29□□□□□ -0.28
CLN6-216ENST00000636876 FBLN5Q9UBX5 448 aa13.29□□□□□ -0.28
CLN6-216ENST00000636876 DAPK2Q9UIK4 370 aa13.29□□□□□ -0.28
CLN6-216ENST00000636876 A0A0B4J203 849 aa13.28□□□□□ -0.28
CLN6-216ENST00000636876 TMEM82A0PJX8 343 aa13.28□□□□□ -0.28
CLN6-216ENST00000636876 SIRPB1O00241 398 aa13.28□□□□□ -0.28
CLN6-216ENST00000636876 GEMIN2O14893 280 aaKnown RBP13.28□□□□□ -0.28
CLN6-216ENST00000636876 ZNF737O75373 536 aa13.28□□□□□ -0.28
CLN6-216ENST00000636876 MSMBP08118 114 aa13.28□□□□□ -0.28
CLN6-216ENST00000636876 ZNF44P15621 663 aa13.28□□□□□ -0.28
CLN6-216ENST00000636876 LCN2P80188 198 aa13.28□□□□□ -0.28
CLN6-216ENST00000636876 KRTAP1-1Q07627 177 aa13.28□□□□□ -0.28
CLN6-216ENST00000636876 SCN1BQ07699 218 aa13.28□□□□□ -0.28
CLN6-216ENST00000636876 PDCD1Q15116 288 aa13.28□□□□□ -0.28
CLN6-216ENST00000636876 MPV17LQ2QL34 196 aa13.28□□□□□ -0.28
CLN6-216ENST00000636876 C2orf76Q3KRA6 126 aa13.28□□□□□ -0.28
CLN6-216ENST00000636876 LINC00596Q86U02 117 aa13.28□□□□□ -0.28
CLN6-216ENST00000636876 ASCC1Q8N9N2 400 aaKnown RBP13.28□□□□□ -0.28
CLN6-216ENST00000636876 CHST4Q8NCG5 386 aa13.28□□□□□ -0.28
CLN6-216ENST00000636876 TMEM185AQ8NFB2 350 aa13.28□□□□□ -0.28
CLN6-216ENST00000636876 ST8SIA4Q92187 359 aa13.28□□□□□ -0.28
CLN6-216ENST00000636876 TMEM59Q9BXS4 323 aa13.28□□□□□ -0.28
CLN6-216ENST00000636876 SELENOIQ9C0D9 397 aa13.28□□□□□ -0.28
CLN6-216ENST00000636876 LIN7BQ9HAP6 207 aa13.28□□□□□ -0.28
CLN6-216ENST00000636876 LPAR2Q9HBW0 351 aa13.28□□□□□ -0.28
CLN6-216ENST00000636876 SLC25A10Q9UBX3 287 aaPredicted RBP13.28□□□□□ -0.28
CLN6-216ENST00000636876 POLR3KQ9Y2Y1 108 aaPredicted RBP13.28□□□□□ -0.28
CLN6-216ENST00000636876 ARHGAP32A7KAX9 2087 aa13.28□□□□□ -0.28
CLN6-216ENST00000636876 WNK2Q9Y3S1 2297 aa13.28□□□□□ -0.28
CLN6-216ENST00000636876 K7N7A8 449 aa13.27□□□□□ -0.29
CLN6-216ENST00000636876 DEGS1O15121 323 aa13.27□□□□□ -0.29
CLN6-216ENST00000636876 LDLRAD4O15165 306 aa13.27□□□□□ -0.29
CLN6-216ENST00000636876 NOL3O60936 208 aaKnown RBP13.27□□□□□ -0.29
CLN6-216ENST00000636876 OR7C1O76099 320 aaPredicted RBP13.27□□□□□ -0.29
CLN6-216ENST00000636876 TK1P04183 234 aa13.27□□□□□ -0.29
CLN6-216ENST00000636876 GABRR1P24046 479 aa13.27□□□□□ -0.29
CLN6-216ENST00000636876 LMO1P25800 156 aa13.27□□□□□ -0.29
CLN6-216ENST00000636876 RPS27AP62979 156 aaKnown RBP13.27□□□□□ -0.29
CLN6-216ENST00000636876 TAF9Q16594 264 aa13.27□□□□□ -0.29
CLN6-216ENST00000636876 CYB5R2Q6BCY4 276 aa13.27□□□□□ -0.29
CLN6-216ENST00000636876 C17orf107Q6ZR85 190 aa13.27□□□□□ -0.29
CLN6-216ENST00000636876 USP43Q70EL4 1123 aa13.27□□□□□ -0.29
CLN6-216ENST00000636876 CROCCP3Q8IVE0 287 aa13.27□□□□□ -0.29
CLN6-216ENST00000636876 ISOC1Q96CN7 298 aa13.27□□□□□ -0.29
CLN6-216ENST00000636876 POM121Q96HA1 1249 aa13.27□□□□□ -0.29
CLN6-216ENST00000636876 SNX22Q96L94 193 aa13.27□□□□□ -0.29
CLN6-216ENST00000636876 FAM234AQ9H0X4 552 aa13.27□□□□□ -0.29
CLN6-216ENST00000636876 DCSTAMPQ9H295 470 aa13.27□□□□□ -0.29
CLN6-216ENST00000636876 IFT22Q9H7X7 185 aa13.27□□□□□ -0.29
CLN6-216ENST00000636876 ZNF581Q9P0T4 197 aa13.27□□□□□ -0.29
CLN6-216ENST00000636876 CEPT1Q9Y6K0 416 aa13.27□□□□□ -0.29
CLN6-216ENST00000636876 TRAV24A0A0B4J272 114 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 TMEM272A0A1B0GTI8 110 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 FAM90A10PA6NDY2 464 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 FAM90A18PA6NE21 464 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 FAM90A16PA6NEW6 464 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 FAM90A20PA6NIJ5 464 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 FAM90A8PA6NJQ4 464 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 FAM90A7PA6NKC0 464 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 FAM90A22PA8MWA6 464 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 FAM90A12PA8MX19 464 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 FAM90A5PA8MXJ8 464 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 FAM90A23PA8MXZ1 464 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 SLC33A1O00400 549 aaPredicted RBP13.26□□□□□ -0.29
CLN6-216ENST00000636876 GPR37O15354 613 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 PSPNO60542 156 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 TMEM127O75204 238 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 FAM90A15PP0C7V4 464 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 FAM90A13PP0C7W8 464 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 FAM90A14PP0C7W9 464 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 FAM90A24PP0C7X0 464 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 ZNF16P17020 682 aaPredicted RBP13.26□□□□□ -0.29
CLN6-216ENST00000636876 NDUFB7P17568 137 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 OR3A1P47881 315 aa13.26□□□□□ -0.29
CLN6-216ENST00000636876 C11orf91Q3C1V1 193 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms