RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 BCDIN3DQ7Z5W3 292 aaKnown RBP4.95□□□□□ -1.62
SCN1A-209ENST00000635750 OR1L6Q8NGR2 347 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 OIT3Q8WWZ8 545 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 SIGLEC11Q96RL6 698 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 RSG1Q9BU20 258 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 MRPL13Q9BYD1 178 aaKnown RBP4.95□□□□□ -1.62
SCN1A-209ENST00000635750 NXF2Q9GZY0 626 aaKnown RBP4.95□□□□□ -1.62
SCN1A-209ENST00000635750 NTN4Q9HB63 628 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 ACER3Q9NUN7 267 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 LAMB1P07942 1786 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 TFAP2AP05549 437 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 AVPR2P30518 371 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 COL13A1Q5TAT6 717 aaPredicted RBP4.95□□□□□ -1.62
SCN1A-209ENST00000635750 C10orf113Q5VZT2 155 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 SHISA5Q8N114 240 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 BVESQ8NE79 360 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 PIK3IP1Q96FE7 263 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 PARP11Q9NR21 331 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 PGPEP1Q9NXJ5 209 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 RNF7Q9UBF6 113 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 MCM3APO60318 1980 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 LOC102724200A0A096LPH7 203 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-209ENST00000635750 C3orf85A0A1B0GTC6 90 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 IFITM5A6NNB3 132 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 SOX15O60248 233 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 TTRP02766 147 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 GPR6P46095 362 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-209ENST00000635750 HYAL1Q12794 435 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 CDC20Q12834 499 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 C20orf196Q8IYI0 205 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 SYS1Q8N2H4 156 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 NFAM1Q8NET5 270 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-209ENST00000635750 PTP4A1Q93096 173 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 PTX4Q96A99 478 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 DUX5Q96PT3 197 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 MSL2Q9HCI7 577 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 B9D1Q9UPM9 204 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 BTAF1O14981 1849 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 TIAM2Q8IVF5 1701 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 ZC3H12DA2A288 527 aaKnown RBP4.94□□□□□ -1.62
SCN1A-209ENST00000635750 RGS13O14921 159 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 LMX1BO60663 402 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 CTSLP07711 333 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 SRD5A2P31213 254 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 LIMK1P53667 647 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 RAC3P60763 192 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 TMEM78Q5T7P6 136 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 ALKAL1Q6UXT8 129 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 MRGPREQ86SM8 312 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 C1orf174Q8IYL3 243 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 GBGT1Q8N5D6 347 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 NUDT10Q8NFP7 164 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 OR13F1Q8NGS4 319 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 RFESDQ8TAC1 157 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 NUDT11Q96G61 164 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 MS4A4AQ96JQ5 239 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 ELOVL1Q9BW60 279 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 SRD5A3Q9H8P0 318 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 RASL12Q9NYN1 266 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 MPC1Q9Y5U8 109 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 MAST2Q6P0Q8 1798 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 ZFC3H1O60293 1989 aaKnown RBP4.94□□□□□ -1.62
SCN1A-209ENST00000635750 IGHV3-43A0A0B4J1X8 118 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 C7orf72A4D263 438 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 PRSS44E7EML9 344 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 SMPD2O60906 423 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 EML2O95834 649 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 ZNF735P0CB33 412 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 IGHV3-43DP0DP04 118 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 KISS1Q15726 138 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 SPINK9Q5DT21 86 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 CLEC9AQ6UXN8 241 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 CENPVQ7Z7K6 275 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-209ENST00000635750 ARRDC1Q8N5I2 433 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 ZNF738Q8NE65 137 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 ZG16BQ96DA0 208 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 PRNDQ9UKY0 176 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 ITGB4P16144 1822 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 HOXD4P09016 255 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-209ENST00000635750 PTHLHP12272 177 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 NUTF2P61970 127 aaKnown RBP4.94□□□□□ -1.62
SCN1A-209ENST00000635750 JOSD1Q15040 202 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-209ENST00000635750 FAM106AQ4KMX7 169 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 PRSS36Q5K4E3 855 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 SPINK14Q6IE38 97 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 ZNF383Q8NA42 475 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 ANAPC16Q96DE5 110 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 TMEM101Q96IK0 257 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 CNTD2Q9H8S5 307 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 LRP12Q9Y561 859 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 A0A1B0GU03 582 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 PPP6CO00743 305 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 TSPOP30536 169 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 CD96P40200 585 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 MMP15P51511 669 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 COX19Q49B96 90 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 CLLU1Q5K131 121 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 PPP1R1CQ8WVI7 109 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 WSB2Q9NYS7 404 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-209ENST00000635750 CCL27Q9Y4X3 112 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms