RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 IGHV1-69P01742 117 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 MELTFP08582 738 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 CALCBP10092 127 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 GABRR1P24046 479 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 DUSP1P28562 367 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 BDKRB2P30411 391 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 BMXP51813 675 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 ZP1P60852 638 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 GUCA2AQ02747 115 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 ACSM1Q08AH1 577 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 ZNF146Q15072 292 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 SPHARQ15513 63 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 DDI2Q5TDH0 399 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 C1orf122Q6ZSJ8 110 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 RNF144BQ7Z419 303 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 PXT1Q8NFP0 134 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 OR4M1Q8NGD0 313 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 OR52N4Q8NGI2 321 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 SGMS2Q8NHU3 365 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 TNFAIP8L1Q8WVP5 186 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 ZDHHC16Q969W1 377 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 OR14A2Q96R54 314 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 Q9H521 79 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 DUSP21Q9H596 190 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 METTL8Q9H825 291 aaKnown RBP12.76□□□□□ -0.37
LINC00339-209ENST00000635450 EXOSC4Q9NPD3 245 aaKnown RBP12.76□□□□□ -0.37
LINC00339-209ENST00000635450 SIRT7Q9NRC8 400 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 C19orf12Q9NSK7 152 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 PAK1IP1Q9NWT1 392 aaPredicted RBP12.76□□□□□ -0.37
LINC00339-209ENST00000635450 IL36RNQ9UBH0 155 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 VWFP04275 2813 aa12.76□□□□□ -0.37
LINC00339-209ENST00000635450 A0A0U1RQK1 487 aa12.75□□□□□ -0.37
LINC00339-209ENST00000635450 GABRPO00591 440 aa12.75□□□□□ -0.37
LINC00339-209ENST00000635450 ZNF737O75373 536 aa12.75□□□□□ -0.37
LINC00339-209ENST00000635450 CRHBPP24387 322 aa12.75□□□□□ -0.37
LINC00339-209ENST00000635450 EEF1B2P24534 225 aaKnown RBP12.75□□□□□ -0.37
LINC00339-209ENST00000635450 MAPK3P27361 379 aaPredicted RBP12.75□□□□□ -0.37
LINC00339-209ENST00000635450 ZNF93P35789 620 aaPredicted RBP12.75□□□□□ -0.37
LINC00339-209ENST00000635450 MTNR1BP49286 362 aa12.75□□□□□ -0.37
LINC00339-209ENST00000635450 EDDM3BP56851 147 aa12.75□□□□□ -0.37
LINC00339-209ENST00000635450 RPS11P62280 158 aaKnown RBP eCLIP12.75□□□□□ -0.37
LINC00339-209ENST00000635450 KLRD1Q13241 179 aa12.75□□□□□ -0.37
LINC00339-209ENST00000635450 RBM48Q5RL73 367 aaKnown RBP12.75□□□□□ -0.37
LINC00339-209ENST00000635450 NCR3LG1Q68D85 454 aa12.75□□□□□ -0.37
LINC00339-209ENST00000635450 ASPHD2Q6ICH7 369 aa12.75□□□□□ -0.37
LINC00339-209ENST00000635450 C16orf87Q6PH81 154 aa12.75□□□□□ -0.37
LINC00339-209ENST00000635450 CRIP3Q6Q6R5 217 aa12.75□□□□□ -0.37
LINC00339-209ENST00000635450 METAP1DQ6UB28 335 aaPredicted RBP12.75□□□□□ -0.37
LINC00339-209ENST00000635450 Q6YL49 198 aa12.75□□□□□ -0.37
LINC00339-209ENST00000635450 OR8H2Q8N162 312 aa12.75□□□□□ -0.37
LINC00339-209ENST00000635450 PIP4P2Q8N4L2 257 aa12.75□□□□□ -0.37
LINC00339-209ENST00000635450 Q8N7P7 452 aa12.75□□□□□ -0.37
LINC00339-209ENST00000635450 ORAI1Q96D31 301 aa12.75□□□□□ -0.37
LINC00339-209ENST00000635450 S100A13Q99584 98 aa12.75□□□□□ -0.37
LINC00339-209ENST00000635450 RRP15Q9Y3B9 282 aaKnown RBP12.75□□□□□ -0.37
LINC00339-209ENST00000635450 A0A1W2PPK0 400 aa12.74□□□□□ -0.37
LINC00339-209ENST00000635450 SIRPB1O00241 398 aa12.74□□□□□ -0.37
LINC00339-209ENST00000635450 GPX5O75715 221 aa12.74□□□□□ -0.37
LINC00339-209ENST00000635450 IGHV4-59P01825 116 aa12.74□□□□□ -0.37
LINC00339-209ENST00000635450 ZNF44P15621 663 aa12.74□□□□□ -0.37
LINC00339-209ENST00000635450 TGFBR2P37173 567 aa12.74□□□□□ -0.37
LINC00339-209ENST00000635450 EDDM3AQ14507 147 aa12.74□□□□□ -0.37
LINC00339-209ENST00000635450 RSU1Q15404 277 aa12.74□□□□□ -0.37
LINC00339-209ENST00000635450 GRK1Q15835 563 aa12.74□□□□□ -0.37
LINC00339-209ENST00000635450 PRR31Q5SQ13 230 aa12.74□□□□□ -0.37
LINC00339-209ENST00000635450 TMEM200BQ69YZ2 307 aa12.74□□□□□ -0.37
LINC00339-209ENST00000635450 SHISA2Q6UWI4 295 aa12.74□□□□□ -0.37
LINC00339-209ENST00000635450 PRSS48Q7RTY5 328 aa12.74□□□□□ -0.37
LINC00339-209ENST00000635450 MS4A15Q8N5U1 240 aa12.74□□□□□ -0.37
LINC00339-209ENST00000635450 SGCDQ92629 289 aa12.74□□□□□ -0.37
LINC00339-209ENST00000635450 OR5M11Q96RB7 305 aa12.74□□□□□ -0.37
LINC00339-209ENST00000635450 ZNF184Q99676 751 aaPredicted RBP12.74□□□□□ -0.37
LINC00339-209ENST00000635450 FOXJ3Q9UPW0 622 aa12.74□□□□□ -0.37
LINC00339-209ENST00000635450 TRBV5-7A0A0A0MS05 114 aa12.73□□□□□ -0.37
LINC00339-209ENST00000635450 TMEM82A0PJX8 343 aa12.73□□□□□ -0.37
LINC00339-209ENST00000635450 OR2H2O95918 312 aa12.73□□□□□ -0.37
LINC00339-209ENST00000635450 IGFBP3P17936 291 aaPredicted RBP12.73□□□□□ -0.37
LINC00339-209ENST00000635450 FSTP19883 344 aa12.73□□□□□ -0.37
LINC00339-209ENST00000635450 PTGFRP43088 359 aa12.73□□□□□ -0.37
LINC00339-209ENST00000635450 SCN1BQ07699 218 aa12.73□□□□□ -0.37
LINC00339-209ENST00000635450 IRF3Q14653 427 aa12.73□□□□□ -0.37
LINC00339-209ENST00000635450 ELP2Q6IA86 826 aa12.73□□□□□ -0.37
LINC00339-209ENST00000635450 C17orf107Q6ZR85 190 aa12.73□□□□□ -0.37
LINC00339-209ENST00000635450 PNKDQ8N490 385 aa12.73□□□□□ -0.37
LINC00339-209ENST00000635450 UFD1Q92890 307 aa12.73□□□□□ -0.37
LINC00339-209ENST00000635450 DERL3Q96Q80 235 aa12.73□□□□□ -0.37
LINC00339-209ENST00000635450 CHST6Q9GZX3 395 aa12.73□□□□□ -0.37
LINC00339-209ENST00000635450 METTL9Q9H1A3 318 aa12.73□□□□□ -0.37
LINC00339-209ENST00000635450 PCDHB16Q9NRJ7 776 aa12.73□□□□□ -0.37
LINC00339-209ENST00000635450 C1RLQ9NZP8 487 aa12.73□□□□□ -0.37
LINC00339-209ENST00000635450 ING4Q9UNL4 249 aa12.73□□□□□ -0.37
LINC00339-209ENST00000635450 LSM2Q9Y333 95 aaKnown RBP12.73□□□□□ -0.37
LINC00339-209ENST00000635450 TRAV8-7A0A075B6U6 113 aa12.72□□□□□ -0.37
LINC00339-209ENST00000635450 A0A1W2PRD5 423 aa12.72□□□□□ -0.37
LINC00339-209ENST00000635450 A0A1W2PRF3 423 aa12.72□□□□□ -0.37
LINC00339-209ENST00000635450 A0A1W2PRM7 423 aa12.72□□□□□ -0.37
LINC00339-209ENST00000635450 hADV38S2A0JD32 116 aa12.72□□□□□ -0.37
LINC00339-209ENST00000635450 FUOMA2VDF0 154 aa12.72□□□□□ -0.37
LINC00339-209ENST00000635450 RNASEK-C17orf49H0YIS7 233 aa12.72□□□□□ -0.37
LINC00339-209ENST00000635450 MGST3O14880 152 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms