RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 OMGP23515 440 aa11.59□□□□□ -0.55
PNKP-223ENST00000629179 SCN1BQ07699 218 aa11.59□□□□□ -0.55
PNKP-223ENST00000629179 DOC2BQ14184 412 aa11.59□□□□□ -0.55
PNKP-223ENST00000629179 GRK1Q15835 563 aa11.59□□□□□ -0.55
PNKP-223ENST00000629179 ZNF782Q6ZMW2 699 aaPredicted RBP11.59□□□□□ -0.55
PNKP-223ENST00000629179 LDLRAD3Q86YD5 345 aa11.59□□□□□ -0.55
PNKP-223ENST00000629179 ZSCAN4Q8NAM6 433 aaPredicted RBP11.59□□□□□ -0.55
PNKP-223ENST00000629179 GPER1Q99527 375 aa11.59□□□□□ -0.55
PNKP-223ENST00000629179 HEXA-AS1Q9H8Q6 139 aa11.59□□□□□ -0.55
PNKP-223ENST00000629179 FKBP14Q9NWM8 211 aa11.59□□□□□ -0.55
PNKP-223ENST00000629179 GLS2Q9UI32 602 aa11.59□□□□□ -0.55
PNKP-223ENST00000629179 POMT1Q9Y6A1 747 aa11.59□□□□□ -0.55
PNKP-223ENST00000629179 TRBV5-5A0A0J9YX44 114 aa11.58□□□□□ -0.56
PNKP-223ENST00000629179 hCG_1809904A0A1W2PP81 198 aa11.58□□□□□ -0.56
PNKP-223ENST00000629179 A0A1W2PPE2 198 aa11.58□□□□□ -0.56
PNKP-223ENST00000629179 A0A1W2PR64 198 aa11.58□□□□□ -0.56
PNKP-223ENST00000629179 A0A1W2PRV1 198 aa11.58□□□□□ -0.56
PNKP-223ENST00000629179 C17orf98A8MV24 154 aa11.58□□□□□ -0.56
PNKP-223ENST00000629179 H0YJX3 145 aa11.58□□□□□ -0.56
PNKP-223ENST00000629179 GABRPO00591 440 aa11.58□□□□□ -0.56
PNKP-223ENST00000629179 ZNF728P0DKX0 622 aa11.58□□□□□ -0.56
PNKP-223ENST00000629179 COX7A1P24310 79 aa11.58□□□□□ -0.56
PNKP-223ENST00000629179 OR3A1P47881 315 aa11.58□□□□□ -0.56
PNKP-223ENST00000629179 RPS11P62280 158 aaKnown RBP eCLIP11.58□□□□□ -0.56
PNKP-223ENST00000629179 MEF2CQ06413 473 aaPredicted RBP11.58□□□□□ -0.56
PNKP-223ENST00000629179 ACSM1Q08AH1 577 aa11.58□□□□□ -0.56
PNKP-223ENST00000629179 C6orf141Q5SZD1 244 aa11.58□□□□□ -0.56
PNKP-223ENST00000629179 Q6P435 159 aa11.58□□□□□ -0.56
PNKP-223ENST00000629179 TCF23Q7RTU1 214 aa11.58□□□□□ -0.56
PNKP-223ENST00000629179 NANOGP1Q8N7R0 232 aa11.58□□□□□ -0.56
PNKP-223ENST00000629179 AJUBAQ96IF1 538 aa11.58□□□□□ -0.56
PNKP-223ENST00000629179 PGLYRP3Q96LB9 341 aa11.58□□□□□ -0.56
PNKP-223ENST00000629179 NR1H4Q96RI1 486 aaPredicted RBP11.58□□□□□ -0.56
PNKP-223ENST00000629179 RHOFQ9HBH0 211 aa11.58□□□□□ -0.56
PNKP-223ENST00000629179 EXOSC4Q9NPD3 245 aaKnown RBP11.58□□□□□ -0.56
PNKP-223ENST00000629179 ZNRD1Q9P1U0 126 aa11.58□□□□□ -0.56
PNKP-223ENST00000629179 FBN3Q75N90 2809 aa11.58□□□□□ -0.56
PNKP-223ENST00000629179 hADV38S2A0JD32 116 aa11.57□□□□□ -0.56
PNKP-223ENST00000629179 PTGES3LE9PB15 166 aa11.57□□□□□ -0.56
PNKP-223ENST00000629179 MGST3O14880 152 aa11.57□□□□□ -0.56
PNKP-223ENST00000629179 MYL12BO14950 172 aa11.57□□□□□ -0.56
PNKP-223ENST00000629179 PAHP00439 452 aa11.57□□□□□ -0.56
PNKP-223ENST00000629179 CRYBA1P05813 215 aa11.57□□□□□ -0.56
PNKP-223ENST00000629179 ZNF44P15621 663 aa11.57□□□□□ -0.56
PNKP-223ENST00000629179 BMXP51813 675 aa11.57□□□□□ -0.56
PNKP-223ENST00000629179 WNT4P56705 351 aa11.57□□□□□ -0.56
PNKP-223ENST00000629179 Q499Y3 187 aa11.57□□□□□ -0.56
PNKP-223ENST00000629179 MIDNQ504T8 468 aa11.57□□□□□ -0.56
PNKP-223ENST00000629179 PXT1Q8NFP0 134 aa11.57□□□□□ -0.56
PNKP-223ENST00000629179 OR10K1Q8NGX5 313 aa11.57□□□□□ -0.56
PNKP-223ENST00000629179 PPP1R35Q8TAP8 253 aa11.57□□□□□ -0.56
PNKP-223ENST00000629179 TNFAIP8L1Q8WVP5 186 aa11.57□□□□□ -0.56
PNKP-223ENST00000629179 SGCDQ92629 289 aa11.57□□□□□ -0.56
PNKP-223ENST00000629179 PPA2Q9H2U2 334 aa11.57□□□□□ -0.56
PNKP-223ENST00000629179 DPAGT1Q9H3H5 408 aa11.57□□□□□ -0.56
PNKP-223ENST00000629179 PCDHGB5Q9Y5G0 923 aa11.57□□□□□ -0.56
PNKP-223ENST00000629179 A0A0G2JK05 382 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 A0A1W2PPK0 400 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 DEGS1O15121 323 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 GPR137BO60478 399 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 ALDOBP05062 364 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 CDK1P06493 297 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 IGFBP3P17936 291 aaPredicted RBP11.56□□□□□ -0.56
PNKP-223ENST00000629179 CELP19835 753 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 MDKP21741 143 aaPredicted RBP11.56□□□□□ -0.56
PNKP-223ENST00000629179 LMO1P25800 156 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 PAX6P26367 422 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 BDKRB2P30411 391 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 OR3A4PP47883 348 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 MTNR1BP49286 362 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 TAS2R43P59537 309 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 PPP3R1P63098 170 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 RELBQ01201 579 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 TAF9Q16594 264 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 YIF1BQ5BJH7 314 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 DDI2Q5TDH0 399 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 ELP2Q6IA86 826 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 ASCL4Q6XD76 172 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 CPNE2Q96FN4 548 aaPredicted RBP11.56□□□□□ -0.56
PNKP-223ENST00000629179 ZNF714Q96N38 554 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 OR14A2Q96R54 314 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 FAM192AQ9GZU8 254 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 TMEM138Q9NPI0 162 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 ING3Q9NXR8 418 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 C1RLQ9NZP8 487 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 ING4Q9UNL4 249 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 ERGIC3Q9Y282 383 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 LINC00312Q9Y6C7 94 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 ANK2Q01484 3957 aa11.56□□□□□ -0.56
PNKP-223ENST00000629179 TRAV8-7A0A075B6U6 113 aa11.55□□□□□ -0.56
PNKP-223ENST00000629179 TRBV5-7A0A0A0MS05 114 aa11.55□□□□□ -0.56
PNKP-223ENST00000629179 MAGEA13PA6NCF6 341 aa11.55□□□□□ -0.56
PNKP-223ENST00000629179 SLC33A1O00400 549 aaPredicted RBP11.55□□□□□ -0.56
PNKP-223ENST00000629179 CDRT1O95170 752 aa11.55□□□□□ -0.56
PNKP-223ENST00000629179 HTR3BO95264 441 aa11.55□□□□□ -0.56
PNKP-223ENST00000629179 IGHV1-8P0DP01 117 aa11.55□□□□□ -0.56
PNKP-223ENST00000629179 ERP29P30040 261 aaKnown RBP11.55□□□□□ -0.56
PNKP-223ENST00000629179 ZNF93P35789 620 aaPredicted RBP11.55□□□□□ -0.56
PNKP-223ENST00000629179 PTGFRP43088 359 aa11.55□□□□□ -0.56
PNKP-223ENST00000629179 GLIPR1P48060 266 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms