RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 CHCHD3Q9NX63 227 aaKnown RBP9.08□□□□□ -0.96
DDX41-219ENST00000629036 IL36GQ9NZH8 169 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 ONECUT1Q9UBC0 465 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 ERGIC3Q9Y282 383 aa9.08□□□□□ -0.96
DDX41-219ENST00000629036 SF3B6Q9Y3B4 125 aaKnown RBP9.08□□□□□ -0.96
DDX41-219ENST00000629036 C17orf98A8MV24 154 aa9.07□□□□□ -0.96
DDX41-219ENST00000629036 CLDN34H7C241 214 aa9.07□□□□□ -0.96
DDX41-219ENST00000629036 SLC33A1O00400 549 aaPredicted RBP9.07□□□□□ -0.96
DDX41-219ENST00000629036 DENRO43583 198 aaKnown RBP9.07□□□□□ -0.96
DDX41-219ENST00000629036 OR2H2O95918 312 aa9.07□□□□□ -0.96
DDX41-219ENST00000629036 CD2P06729 351 aa9.07□□□□□ -0.96
DDX41-219ENST00000629036 CHRM2P08172 466 aa9.07□□□□□ -0.96
DDX41-219ENST00000629036 CD37P11049 281 aa9.07□□□□□ -0.96
DDX41-219ENST00000629036 PRTN3P24158 256 aa9.07□□□□□ -0.96
DDX41-219ENST00000629036 MAP2K4P45985 399 aa9.07□□□□□ -0.96
DDX41-219ENST00000629036 RPL31P62899 125 aaKnown RBP9.07□□□□□ -0.96
DDX41-219ENST00000629036 TPBGQ13641 420 aa9.07□□□□□ -0.96
DDX41-219ENST00000629036 TBCEQ15813 527 aaPredicted RBP9.07□□□□□ -0.96
DDX41-219ENST00000629036 NHLRC3Q5JS37 347 aa9.07□□□□□ -0.96
DDX41-219ENST00000629036 RBM48Q5RL73 367 aaKnown RBP9.07□□□□□ -0.96
DDX41-219ENST00000629036 DDI2Q5TDH0 399 aa9.07□□□□□ -0.96
DDX41-219ENST00000629036 GPR157Q5UAW9 335 aa9.07□□□□□ -0.96
DDX41-219ENST00000629036 PNKDQ8N490 385 aa9.07□□□□□ -0.96
DDX41-219ENST00000629036 OR4M1Q8NGD0 313 aa9.07□□□□□ -0.96
DDX41-219ENST00000629036 COQ2Q96H96 371 aa9.07□□□□□ -0.96
DDX41-219ENST00000629036 SNX22Q96L94 193 aa9.07□□□□□ -0.96
DDX41-219ENST00000629036 CHST6Q9GZX3 395 aa9.07□□□□□ -0.96
DDX41-219ENST00000629036 SCN3BQ9NY72 215 aa9.07□□□□□ -0.96
DDX41-219ENST00000629036 TPRKBQ9Y3C4 175 aa9.07□□□□□ -0.96
DDX41-219ENST00000629036 TRAV24A0A0B4J272 114 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 A0A0G2JK05 382 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 A0A0U1RQK1 487 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 A0A1W2PP11 408 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 A0A1W2PPK0 400 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 MEX3AA1L020 520 aaKnown RBP9.06□□□□□ -0.96
DDX41-219ENST00000629036 MEGF11A6BM72 1044 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 RGS10O43665 173 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 CDRT1O95170 752 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 CSN2P05814 226 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 TMEM225BP0DP42 221 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 FPR2P25090 351 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 BDKRB2P30411 391 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 PTGFRP43088 359 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 MTNR1BP49286 362 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 SNU13P55769 128 aaKnown RBP9.06□□□□□ -0.96
DDX41-219ENST00000629036 BPIFB3P59826 476 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 PAX5Q02548 391 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 GPR50Q13585 617 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 SLC9A3R2Q15599 337 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 LDLRAD2Q5SZI1 272 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 TMEM91Q6ZNR0 172 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 LRRTM1Q86UE6 522 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 LDLRAD3Q86YD5 345 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 FAM185AQ8N0U4 392 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 TPRX1Q8N7U7 411 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 ASCC1Q8N9N2 400 aaKnown RBP9.06□□□□□ -0.96
DDX41-219ENST00000629036 OR10K1Q8NGX5 313 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 FAM216AQ8WUB2 273 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 TNFAIP8L1Q8WVP5 186 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 C17orf50Q8WW18 174 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 GFI1Q99684 422 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 MS4A7Q9GZW8 240 aaPredicted RBP9.06□□□□□ -0.96
DDX41-219ENST00000629036 METTL8Q9H825 291 aaKnown RBP9.06□□□□□ -0.96
DDX41-219ENST00000629036 ISYNA1Q9NPH2 558 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 NOX4Q9NPH5 578 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 FOXJ3Q9UPW0 622 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 GSTK1Q9Y2Q3 226 aa9.06□□□□□ -0.96
DDX41-219ENST00000629036 A0A1W2PQ09 198 aa9.05□□□□□ -0.96
DDX41-219ENST00000629036 ODF3BA8MYP8 253 aa9.05□□□□□ -0.96
DDX41-219ENST00000629036 SIRPB1O00241 398 aa9.05□□□□□ -0.96
DDX41-219ENST00000629036 CYB5AP00167 134 aa9.05□□□□□ -0.96
DDX41-219ENST00000629036 RBP4P02753 201 aa9.05□□□□□ -0.96
DDX41-219ENST00000629036 RNASE1P07998 156 aaKnown RBP9.05□□□□□ -0.96
DDX41-219ENST00000629036 MELTFP08582 738 aa9.05□□□□□ -0.96
DDX41-219ENST00000629036 UCHL1P09936 223 aa9.05□□□□□ -0.96
DDX41-219ENST00000629036 CPEP16870 476 aa9.05□□□□□ -0.96
DDX41-219ENST00000629036 ERP29P30040 261 aaKnown RBP9.05□□□□□ -0.96
DDX41-219ENST00000629036 ZNF93P35789 620 aaPredicted RBP9.05□□□□□ -0.96
DDX41-219ENST00000629036 TGFBR2P37173 567 aa9.05□□□□□ -0.96
DDX41-219ENST00000629036 CAPZA1P52907 286 aa9.05□□□□□ -0.96
DDX41-219ENST00000629036 P2RX3P56373 397 aa9.05□□□□□ -0.96
DDX41-219ENST00000629036 GABARAPL2P60520 117 aa9.05□□□□□ -0.96
DDX41-219ENST00000629036 RPS25P62851 125 aaKnown RBP9.05□□□□□ -0.96
DDX41-219ENST00000629036 MLLT11Q13015 90 aaPredicted RBP9.05□□□□□ -0.96
DDX41-219ENST00000629036 IL13RA2Q14627 380 aa9.05□□□□□ -0.96
DDX41-219ENST00000629036 SSX1Q16384 188 aa9.05□□□□□ -0.96
DDX41-219ENST00000629036 PIGYQ3MUY2 71 aa9.05□□□□□ -0.96
DDX41-219ENST00000629036 LIPKQ5VXJ0 399 aa9.05□□□□□ -0.96
DDX41-219ENST00000629036 Q6YL49 198 aa9.05□□□□□ -0.96
DDX41-219ENST00000629036 PDZD9Q8IXQ8 264 aa9.05□□□□□ -0.96
DDX41-219ENST00000629036 OR4D6Q8NGJ1 314 aa9.05□□□□□ -0.96
DDX41-219ENST00000629036 DUX5Q96PT3 197 aa9.05□□□□□ -0.96
DDX41-219ENST00000629036 IFT22Q9H7X7 185 aa9.05□□□□□ -0.96
DDX41-219ENST00000629036 EXOSC4Q9NPD3 245 aaKnown RBP9.05□□□□□ -0.96
DDX41-219ENST00000629036 ACOT13Q9NPJ3 140 aa9.05□□□□□ -0.96
DDX41-219ENST00000629036 MGST3O14880 152 aa9.04□□□□□ -0.96
DDX41-219ENST00000629036 NPFFO15130 113 aa9.04□□□□□ -0.96
DDX41-219ENST00000629036 MMP23AO75900 390 aa9.04□□□□□ -0.96
DDX41-219ENST00000629036 ZNF728P0DKX0 622 aa9.04□□□□□ -0.96
DDX41-219ENST00000629036 CGB3P0DN86 165 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms