RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 TIMP3P35625 211 aa18.83■□□□□ 0.6
PNKP-220ENST00000627232 ERVS71-1P61550 626 aa18.83■□□□□ 0.6
PNKP-220ENST00000627232 Q8IYB0 196 aa18.83■□□□□ 0.6
PNKP-220ENST00000627232 MARS2Q96GW9 593 aaKnown RBP18.83■□□□□ 0.6
PNKP-220ENST00000627232 HS3ST6Q96QI5 342 aa18.83■□□□□ 0.6
PNKP-220ENST00000627232 NMES1Q9C002 83 aa18.83■□□□□ 0.6
PNKP-220ENST00000627232 FAM215AQ9Y5M1 114 aa18.83■□□□□ 0.6
PNKP-220ENST00000627232 FAM221AA4D161 298 aa18.82■□□□□ 0.6
PNKP-220ENST00000627232 GLP1RP43220 463 aa18.82■□□□□ 0.6
PNKP-220ENST00000627232 UCP3P55916 312 aa18.82■□□□□ 0.6
PNKP-220ENST00000627232 PSG7Q13046 419 aa18.82■□□□□ 0.6
PNKP-220ENST00000627232 SLC9A3R2Q15599 337 aa18.82■□□□□ 0.6
PNKP-220ENST00000627232 C11orf87Q6NUJ2 197 aa18.82■□□□□ 0.6
PNKP-220ENST00000627232 FAM180AQ6UWF9 173 aa18.82■□□□□ 0.6
PNKP-220ENST00000627232 Q6ZPA2 131 aa18.82■□□□□ 0.6
PNKP-220ENST00000627232 SEC22AQ96IW7 307 aa18.82■□□□□ 0.6
PNKP-220ENST00000627232 SLX1AQ9BQ83 275 aa18.82■□□□□ 0.6
PNKP-220ENST00000627232 ADAT1Q9BUB4 502 aaKnown RBP18.82■□□□□ 0.6
PNKP-220ENST00000627232 BCL2L14Q9BZR8 327 aa18.82■□□□□ 0.6
PNKP-220ENST00000627232 RIMS4Q9H426 269 aaPredicted RBP18.82■□□□□ 0.6
PNKP-220ENST00000627232 CHMP1AQ9HD42 196 aaPredicted RBP18.82■□□□□ 0.6
PNKP-220ENST00000627232 POLDIP2Q9Y2S7 368 aa18.82■□□□□ 0.6
PNKP-220ENST00000627232 ESPL1Q14674 2120 aa18.82■□□□□ 0.6
PNKP-220ENST00000627232 OR5H1A6NKK0 313 aa18.81■□□□□ 0.6
PNKP-220ENST00000627232 TMEM210A6NLX4 147 aa18.81■□□□□ 0.6
PNKP-220ENST00000627232 FAM25EA8MYX2 175 aa18.81■□□□□ 0.6
PNKP-220ENST00000627232 CECR9P0C854 216 aa18.81■□□□□ 0.6
PNKP-220ENST00000627232 ZNF728P0DKX0 622 aa18.81■□□□□ 0.6
PNKP-220ENST00000627232 SERPINF1P36955 418 aa18.81■□□□□ 0.6
PNKP-220ENST00000627232 EXOSC2Q13868 293 aaKnown RBP18.81■□□□□ 0.6
PNKP-220ENST00000627232 ZNF546Q86UE3 836 aa18.81■□□□□ 0.6
PNKP-220ENST00000627232 SGPP2Q8IWX5 399 aa18.81■□□□□ 0.6
PNKP-220ENST00000627232 FAM57AQ8TBR7 257 aa18.81■□□□□ 0.6
PNKP-220ENST00000627232 KLF14Q8TD94 323 aaPredicted RBP18.81■□□□□ 0.6
PNKP-220ENST00000627232 PPP1R1CQ8WVI7 109 aa18.81■□□□□ 0.6
PNKP-220ENST00000627232 C1QTNF6Q9BXI9 259 aa18.81■□□□□ 0.6
PNKP-220ENST00000627232 MFFQ9GZY8 342 aa18.81■□□□□ 0.6
PNKP-220ENST00000627232 LIME1Q9H400 295 aa18.81■□□□□ 0.6
PNKP-220ENST00000627232 Q9N2K0 584 aa18.81■□□□□ 0.6
PNKP-220ENST00000627232 IL36RNQ9UBH0 155 aa18.81■□□□□ 0.6
PNKP-220ENST00000627232 UBQLN2Q9UHD9 624 aa18.81■□□□□ 0.6
PNKP-220ENST00000627232 MAB21L2Q9Y586 359 aa18.81■□□□□ 0.6
PNKP-220ENST00000627232 A0A0D9SG52 128 aa18.8■□□□□ 0.6
PNKP-220ENST00000627232 C5orf51A6NDU8 294 aa18.8■□□□□ 0.6
PNKP-220ENST00000627232 IFNA2P01563 188 aa18.8■□□□□ 0.6
PNKP-220ENST00000627232 ANKRD55Q3KP44 614 aa18.8■□□□□ 0.6
PNKP-220ENST00000627232 WDR86Q86TI4 376 aa18.8■□□□□ 0.6
PNKP-220ENST00000627232 PIK3IP1Q96FE7 263 aa18.8■□□□□ 0.6
PNKP-220ENST00000627232 WASF3Q9UPY6 502 aa18.8■□□□□ 0.6
PNKP-220ENST00000627232 ZFHX2Q9C0A1 2572 aaPredicted RBP18.8■□□□□ 0.6
PNKP-220ENST00000627232 INTS1Q8N201 2190 aaKnown RBP18.8■□□□□ 0.6
PNKP-220ENST00000627232 TRBV6-6A0A0A6YYG2 114 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 CRYM-AS1A6NIL9 109 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 RP2O75695 350 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 ACAA1P09110 424 aaPredicted RBP18.79■□□□□ 0.6
PNKP-220ENST00000627232 FCGR2CP31995 323 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 RBM39Q14498 530 aaKnown RBP18.79■□□□□ 0.6
PNKP-220ENST00000627232 ZNF345Q14585 488 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 ZNF324BQ6AW86 544 aaPredicted RBP18.79■□□□□ 0.6
PNKP-220ENST00000627232 C3P1Q6ZMU1 363 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 SPACA3Q8IXA5 215 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 SCCPDHQ8NBX0 429 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 MOB3AQ96BX8 217 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 ARL6Q9H0F7 186 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 WDR13Q9H1Z4 485 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 PURGQ9UJV8 347 aaKnown RBP18.79■□□□□ 0.6
PNKP-220ENST00000627232 SLC25A15Q9Y619 301 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 URB1O60287 2271 aaKnown RBP18.79■□□□□ 0.6
PNKP-220ENST00000627232 POM121CA8CG34 1229 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 EEF1E1-BLOC1S5C9J1V9 151 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 RHBDL1O75783 438 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 KNG1P01042 644 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 SPINK2P20155 84 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 KITLGP21583 273 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 MPV17P39210 176 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 ERVK11-1P61568 191 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 OR8G1Q15617 311 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 ALKBH6Q3KRA9 238 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 SUMF2Q8NBJ7 301 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 OR8G5Q8NG78 346 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 THAP6Q8TBB0 222 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 ZNF488Q96MN9 340 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 SCNM1Q9BWG6 230 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 SFXN3Q9BWM7 321 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 TNFSF18Q9UNG2 199 aa18.79■□□□□ 0.6
PNKP-220ENST00000627232 GVINP1Q7Z2Y8 2422 aa18.78■□□□□ 0.6
PNKP-220ENST00000627232 IGHV2OR16-5A0A0B4J2B6 119 aa18.78■□□□□ 0.6
PNKP-220ENST00000627232 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.78■□□□□ 0.6
PNKP-220ENST00000627232 KIR2DS1A0A191URI9 304 aa18.78■□□□□ 0.6
PNKP-220ENST00000627232 TUBAL3A6NHL2 446 aa18.78■□□□□ 0.6
PNKP-220ENST00000627232 ERVH48-1M5A8F1 160 aa18.78■□□□□ 0.6
PNKP-220ENST00000627232 OR2F2O95006 317 aa18.78■□□□□ 0.6
PNKP-220ENST00000627232 CFDP00746 253 aaPredicted RBP18.78■□□□□ 0.6
PNKP-220ENST00000627232 CEACAM8P31997 349 aaPredicted RBP18.78■□□□□ 0.6
PNKP-220ENST00000627232 RBMXP38159 391 aaKnown RBP18.78■□□□□ 0.6
PNKP-220ENST00000627232 KIR2DS4P43632 304 aa18.78■□□□□ 0.6
PNKP-220ENST00000627232 OR2F1Q13607 317 aa18.78■□□□□ 0.6
PNKP-220ENST00000627232 KIR2DS1Q14954 304 aa18.78■□□□□ 0.6
PNKP-220ENST00000627232 C3orf36Q3SXR2 165 aa18.78■□□□□ 0.6
PNKP-220ENST00000627232 C1QTNF12Q5T7M4 302 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms