RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 NEIL1Q96FI4 390 aaPredicted RBP10.54□□□□□ -0.72
PNKP-217ENST00000625216 RNF170Q96K19 258 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 CMTM3Q96MX0 182 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 SDHCQ99643 169 aaPredicted RBP10.54□□□□□ -0.72
PNKP-217ENST00000625216 TMEM246Q9BRR3 403 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 SSBP3Q9BWW4 388 aaPredicted RBP10.54□□□□□ -0.72
PNKP-217ENST00000625216 SRRQ9GZT4 340 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 ABCG5Q9H222 651 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 MMP26Q9NRE1 261 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 RNF7Q9UBF6 113 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 INSIG2Q9Y5U4 225 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 DYSFO75923 2080 aa10.53□□□□□ -0.72
PNKP-217ENST00000625216 IGHV3-64DA0A0J9YX35 117 aa10.53□□□□□ -0.72
PNKP-217ENST00000625216 OR5B21A6NL26 309 aa10.53□□□□□ -0.72
PNKP-217ENST00000625216 PPIAL4GP0DN37 164 aa10.53□□□□□ -0.72
PNKP-217ENST00000625216 RPS2P15880 293 aaKnown RBP10.53□□□□□ -0.72
PNKP-217ENST00000625216 GNG3P63215 75 aa10.53□□□□□ -0.72
PNKP-217ENST00000625216 FAM131AQ6UXB0 335 aa10.53□□□□□ -0.72
PNKP-217ENST00000625216 ASCL4Q6XD76 172 aa10.53□□□□□ -0.72
PNKP-217ENST00000625216 DCDC5Q6ZRR9 648 aa10.53□□□□□ -0.72
PNKP-217ENST00000625216 OR2W3Q7Z3T1 314 aa10.53□□□□□ -0.72
PNKP-217ENST00000625216 SNX29P2Q8IUI4 249 aa10.53□□□□□ -0.72
PNKP-217ENST00000625216 BPIFB2Q8N4F0 458 aa10.53□□□□□ -0.72
PNKP-217ENST00000625216 TMEM104Q8NE00 496 aa10.53□□□□□ -0.72
PNKP-217ENST00000625216 OR8B3Q8NGG8 313 aa10.53□□□□□ -0.72
PNKP-217ENST00000625216 OR10K1Q8NGX5 313 aa10.53□□□□□ -0.72
PNKP-217ENST00000625216 OR8S1Q8NH09 359 aa10.53□□□□□ -0.72
PNKP-217ENST00000625216 FAM46BQ96A09 425 aa10.53□□□□□ -0.72
PNKP-217ENST00000625216 CPNE2Q96FN4 548 aaPredicted RBP10.53□□□□□ -0.72
PNKP-217ENST00000625216 OR8B2Q96RD0 313 aa10.53□□□□□ -0.72
PNKP-217ENST00000625216 RTL8AQ9BWD3 113 aa10.53□□□□□ -0.72
PNKP-217ENST00000625216 C14orf119Q9NWQ9 140 aa10.53□□□□□ -0.72
PNKP-217ENST00000625216 FBLN5Q9UBX5 448 aa10.53□□□□□ -0.72
PNKP-217ENST00000625216 ING4Q9UNL4 249 aa10.53□□□□□ -0.72
PNKP-217ENST00000625216 FBN3Q75N90 2809 aa10.53□□□□□ -0.72
PNKP-217ENST00000625216 TANC2Q9HCD6 1990 aa10.52□□□□□ -0.72
PNKP-217ENST00000625216 A0A0A6YYD4 124 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 FABP12A6NFH5 140 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 TRIM77I1YAP6 450 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 NDUFA2O43678 99 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 SYNGR1O43759 233 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 ZNF205O95201 554 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 MPIG6BO95866 241 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 UBBP0CG47 229 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 TMEM225BP0DP42 221 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 RAB6AP20340 208 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 CDK2P24941 298 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 RBMXP38159 391 aaKnown RBP10.52□□□□□ -0.73
PNKP-217ENST00000625216 HAAOP46952 286 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 CAPZA1P52907 286 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 PPP5CP53041 499 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 SEC61A1P61619 476 aaKnown RBP10.52□□□□□ -0.73
PNKP-217ENST00000625216 GNB2P62879 340 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 PAX8Q06710 450 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 PDZK1IP1Q13113 114 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 MPPED2Q15777 294 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 SLC22A6Q4U2R8 563 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 PRAMEF6Q5VXH4 476 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 METAP1DQ6UB28 335 aaPredicted RBP10.52□□□□□ -0.73
PNKP-217ENST00000625216 BTNL3Q6UXE8 466 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 SLC25A26Q70HW3 274 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 PXT1Q8NFP0 134 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 RAB40AQ8WXH6 277 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 BORCS5Q969J3 196 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 PTX4Q96A99 478 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 HIST1H2AAQ96QV6 131 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 MICU1Q9BPX6 476 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 OR51I2Q9H344 312 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 BANF2Q9H503 90 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 UFSP2Q9NUQ7 469 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 NUP50Q9UKX7 468 aa10.52□□□□□ -0.73
PNKP-217ENST00000625216 WNK2Q9Y3S1 2297 aa10.51□□□□□ -0.73
PNKP-217ENST00000625216 KIR2DS1A0A191URI9 304 aa10.51□□□□□ -0.73
PNKP-217ENST00000625216 J3QT63 122 aa10.51□□□□□ -0.73
PNKP-217ENST00000625216 LGALS8O00214 317 aa10.51□□□□□ -0.73
PNKP-217ENST00000625216 SERPINA2P20848 420 aa10.51□□□□□ -0.73
PNKP-217ENST00000625216 TALDO1P37837 337 aa10.51□□□□□ -0.73
PNKP-217ENST00000625216 PITPNBP48739 271 aa10.51□□□□□ -0.73
PNKP-217ENST00000625216 NPY4RP50391 375 aa10.51□□□□□ -0.73
PNKP-217ENST00000625216 TAS2R20P59543 309 aa10.51□□□□□ -0.73
PNKP-217ENST00000625216 IFITM3Q01628 133 aa10.51□□□□□ -0.73
PNKP-217ENST00000625216 PAX2Q02962 417 aa10.51□□□□□ -0.73
PNKP-217ENST00000625216 IL18Q14116 193 aa10.51□□□□□ -0.73
PNKP-217ENST00000625216 MOGAT2Q3SYC2 334 aa10.51□□□□□ -0.73
PNKP-217ENST00000625216 FAM201AQ5SY85 155 aa10.51□□□□□ -0.73
PNKP-217ENST00000625216 HAGHLQ6PII5 290 aaPredicted RBP10.51□□□□□ -0.73
PNKP-217ENST00000625216 RBMS3Q6XE24 437 aaKnown RBP10.51□□□□□ -0.73
PNKP-217ENST00000625216 RTN4RL2Q86UN3 420 aa10.51□□□□□ -0.73
PNKP-217ENST00000625216 BATF2Q8N1L9 274 aa10.51□□□□□ -0.73
PNKP-217ENST00000625216 FAM216AQ8WUB2 273 aa10.51□□□□□ -0.73
PNKP-217ENST00000625216 SLAMF9Q96A28 289 aa10.51□□□□□ -0.73
PNKP-217ENST00000625216 CYYR1Q96J86 154 aa10.51□□□□□ -0.73
PNKP-217ENST00000625216 NICN1Q9BSH3 213 aa10.51□□□□□ -0.73
PNKP-217ENST00000625216 TMEM59Q9BXS4 323 aa10.51□□□□□ -0.73
PNKP-217ENST00000625216 METTL9Q9H1A3 318 aa10.51□□□□□ -0.73
PNKP-217ENST00000625216 LPAR5Q9H1C0 372 aa10.51□□□□□ -0.73
PNKP-217ENST00000625216 ELL3Q9HB65 397 aaPredicted RBP10.51□□□□□ -0.73
PNKP-217ENST00000625216 IL36GQ9NZH8 169 aa10.51□□□□□ -0.73
PNKP-217ENST00000625216 GHRLQ9UBU3 117 aa10.51□□□□□ -0.73
PNKP-217ENST00000625216 CLN8Q9UBY8 286 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms