RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 GABRG3Q99928 467 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 PYGO2Q9BRQ0 406 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 RTBDNQ9BSG5 229 aaPredicted RBP6.95□□□□□ -1.3
VPS11-209ENST00000622309 PATZ1Q9HBE1 687 aaKnown RBP6.95□□□□□ -1.3
VPS11-209ENST00000622309 SERGEFQ9UGK8 458 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 TBX21Q9UL17 535 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 SLC45A2Q9UMX9 530 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 PLXND1Q9Y4D7 1925 aa6.95□□□□□ -1.3
VPS11-209ENST00000622309 FEZF1A0PJY2 475 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 ZFP92A6NM28 416 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 ZNF217O75362 1048 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 ADH1BP00325 375 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 HMGA1P17096 107 aaKnown RBP6.94□□□□□ -1.3
VPS11-209ENST00000622309 ALOX5APP20292 161 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 HNRNPA1L2Q32P51 320 aaKnown RBP6.94□□□□□ -1.3
VPS11-209ENST00000622309 TPTE2P1Q5T6R2 138 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 OR10G4Q8NGN3 311 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 TSSK2Q96PF2 358 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 TUBD1Q9UJT1 453 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 B3GALT5Q9Y2C3 310 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 DKK1O94907 266 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 ABHD16AO95870 558 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 SERPINA7P05543 415 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 AMY2BP19961 511 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 ARF6P62330 175 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 MFGE8Q08431 387 aaPredicted RBP6.94□□□□□ -1.3
VPS11-209ENST00000622309 SMIM21Q3B7S5 101 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 FAM90A2PQ658T7 463 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 ATG4DQ86TL0 474 aaPredicted RBP6.94□□□□□ -1.3
VPS11-209ENST00000622309 CISD2Q8N5K1 135 aaKnown RBP6.94□□□□□ -1.3
VPS11-209ENST00000622309 OR2T10Q8NGZ9 312 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 ADOQ96SZ5 270 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 MEGF9Q9H1U4 602 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 VCX2Q9H322 139 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 KNL1Q8NG31 2342 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 CENPVL1A0A0U1RR11 272 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 LOC102723971A0A1B0GUV8 181 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 OR6A2O95222 327 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 SPTBP11277 2137 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 RPS27P42677 84 aaKnown RBP6.94□□□□□ -1.3
VPS11-209ENST00000622309 PAFAH1B2P68402 229 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 PRDX4Q13162 271 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 MYO9BQ13459 2157 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 DPY19L4Q7Z388 723 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 OR4D5Q8NGN0 318 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 EMG1Q92979 244 aaKnown RBP6.94□□□□□ -1.3
VPS11-209ENST00000622309 PTX4Q96A99 478 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 TTC28Q96AY4 2481 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 CNRIP1Q96F85 164 aaPredicted RBP6.94□□□□□ -1.3
VPS11-209ENST00000622309 IL17FQ96PD4 163 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 MACROD1Q9BQ69 325 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 HSPB9Q9BQS6 159 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 GPR84Q9NQS5 396 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 MYOFQ9NZM1 2061 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 SLC22A13Q9Y226 551 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 RFNGQ9Y644 331 aa6.94□□□□□ -1.3
VPS11-209ENST00000622309 USP34Q70CQ2 3546 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 A0A1W2PNV4 684 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 SCGB2A1O75556 95 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 MMP23AO75900 390 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 LYPD3O95274 346 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 DBIP07108 87 aaKnown RBP6.93□□□□□ -1.3
VPS11-209ENST00000622309 PRLHRP49683 370 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 BLKP51451 505 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 CRYBA4P53673 196 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 MESP2Q0VG99 397 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 SLC17A1Q14916 467 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 PCK2Q16822 640 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 SNAI3Q3KNW1 292 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 SPATA45Q537H7 98 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 VAX1Q5SQQ9 334 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 LINC01590Q5TEZ4 76 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 OR51G1Q8NGK1 321 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 MRPL24Q96A35 216 aaKnown RBP6.93□□□□□ -1.3
VPS11-209ENST00000622309 PINX1Q96BK5 328 aaKnown RBP6.93□□□□□ -1.3
VPS11-209ENST00000622309 HARBI1Q96MB7 349 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 TMEM56Q96MV1 263 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 ABHD6Q9BV23 337 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 CLEC4EQ9ULY5 219 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 TBL2Q9Y4P3 447 aaKnown RBP6.93□□□□□ -1.3
VPS11-209ENST00000622309 TRAPPC1Q9Y5R8 145 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 TMEM14AQ9Y6G1 99 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 TMEM56-RWDD3S4R434 201 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 CACNA1CQ13936 2221 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 TRAV26-1A0A087WT03 109 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 NPIPA5A0A0B4J1W7 369 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 NRG2O14511 850 aaPredicted RBP6.93□□□□□ -1.3
VPS11-209ENST00000622309 SPINT1O43278 529 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 HRASP01112 189 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 H2BFMP0C1H6 154 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 PSMB5P28074 263 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 UBE2NP61088 152 aaKnown RBP6.93□□□□□ -1.3
VPS11-209ENST00000622309 ZNF117Q03924 483 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 GNMTQ14749 295 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 MORN2Q502X0 79 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 SLC8B1Q6J4K2 584 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 RNF44Q7L0R7 432 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 TMEM234Q8WY98 164 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 BTF3L4Q96K17 158 aa6.93□□□□□ -1.3
VPS11-209ENST00000622309 LRFN3Q9BTN0 628 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms