RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 WNT2BQ93097 391 aa8.29□□□□□ -1.08
IGHV3-54-201ENST00000622166 TMEM56Q96MV1 263 aa8.29□□□□□ -1.08
IGHV3-54-201ENST00000622166 ZPBPQ9BS86 351 aa8.29□□□□□ -1.08
IGHV3-54-201ENST00000622166 REPIN1Q9BWE0 567 aaKnown RBP8.29□□□□□ -1.08
IGHV3-54-201ENST00000622166 SPRY4Q9C004 299 aa8.29□□□□□ -1.08
IGHV3-54-201ENST00000622166 RNF122Q9H9V4 155 aa8.29□□□□□ -1.08
IGHV3-54-201ENST00000622166 Q9N2K0 584 aa8.29□□□□□ -1.08
IGHV3-54-201ENST00000622166 MLXQ9UH92 298 aa8.29□□□□□ -1.08
IGHV3-54-201ENST00000622166 BOKQ9UMX3 212 aaPredicted RBP8.29□□□□□ -1.08
IGHV3-54-201ENST00000622166 RCL1Q9Y2P8 373 aaKnown RBP8.29□□□□□ -1.08
IGHV3-54-201ENST00000622166 TMEM56-RWDD3S4R434 201 aa8.29□□□□□ -1.08
IGHV3-54-201ENST00000622166 KMT2EQ8IZD2 1858 aa8.29□□□□□ -1.08
IGHV3-54-201ENST00000622166 DUXBA0A1W2PPF3 345 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 FAM221AA4D161 298 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 C9JQL5 133 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 PHF1O43189 567 aaPredicted RBP8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 SS18L1O75177 396 aaPredicted RBP8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 TRAPPC6AO75865 159 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 CDS2O95674 445 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 SCGB1D2O95969 90 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 NAPSAO96009 420 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 F12P00748 615 aaPredicted RBP8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 PPYP01298 95 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 OR8U9P0C7N5 309 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 MMP9P14780 707 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 CD80P33681 288 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 SNCAP37840 140 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 PRSS12P56730 875 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 FGF12P61328 243 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 RPS18P62269 152 aaKnown RBP8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 ARF1P84077 181 aaKnown RBP8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 PEA15Q15121 130 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 PHLDA2Q53GA4 152 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 AVPI1Q5T686 147 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 BRICD5Q6PL45 260 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 FBXW12Q6X9E4 464 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 SLC25A26Q70HW3 274 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 TIPARPQ7Z3E1 657 aaKnown RBP8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 DPPA2Q7Z7J5 298 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 CALHM1Q8IU99 346 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 IQCF2Q8IXL9 164 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 ZNF611Q8N823 705 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 CPEB3Q8NE35 698 aaKnown RBP8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 OR11L1Q8NGX0 322 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 OR8U1Q8NH10 309 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 EXTL1Q92935 676 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 ZNF845Q96IR2 970 aaPredicted RBP8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 FAM173AQ9BQD7 235 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 SMIM3Q9BZL3 60 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 EGLN1Q9GZT9 426 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 FGF23Q9GZV9 251 aaPredicted RBP8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 TMEM222Q9H0R3 208 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 ZNF442Q9H7R0 627 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 SMCO4Q9NRQ5 59 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 LUZP4Q9P127 313 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 CACFD1Q9UGQ2 172 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 NOSIPQ9Y314 301 aaKnown RBP8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 ZNF175Q9Y473 711 aa8.28□□□□□ -1.08
IGHV3-54-201ENST00000622166 TRBV6-6A0A0A6YYG2 114 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 C3orf85A0A1B0GTC6 90 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 CLEC18AA5D8T8 446 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 COLCA2A8K830 154 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 ZNF724A8MTY0 619 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 LAMTOR5O43504 91 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 MRPL33O75394 65 aaKnown RBP8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 TUSC2O75896 110 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 DIRAS3O95661 229 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 TSPAN15O95858 294 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 CTXN2P0C2S0 81 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 ZNF883P0CG24 379 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 ID4P47928 161 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 NPBWR2P48146 333 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 LHX2P50458 406 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 RAB13P51153 203 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 PRDX4Q13162 271 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 MPV17LQ2QL34 196 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 DBX2Q6ZNG2 339 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 SELENOHQ8IZQ5 122 aaKnown RBP8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 C15orf54Q8N8G6 183 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 CLEC18CQ8NCF0 446 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 OR56B2PQ8NGI1 322 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 OR52M1Q8NGK5 317 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 OR5L1Q8NGL2 311 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 SNIP1Q8TAD8 396 aaKnown RBP8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 ABHD3Q8WU67 409 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 GTF3AQ92664 365 aaKnown RBP8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 TAAR9Q96RI9 348 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 TP53RKQ96S44 253 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 SPIN2AQ99865 258 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 SPIN2BQ9BPZ2 258 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 DDA1Q9BW61 102 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 SAV1Q9H4B6 383 aaPredicted RBP8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 PRDM6Q9NQX0 595 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 BIN3Q9NQY0 253 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 SLC7A10Q9NS82 523 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 C19orf12Q9NSK7 152 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 P4HTMQ9NXG6 502 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 LOXL2Q9Y4K0 774 aa8.27□□□□□ -1.09
IGHV3-54-201ENST00000622166 SDK1Q7Z5N4 2213 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms