RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 RAET1LQ5VY80 246 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 FAM166AQ6J272 317 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 ANKRD37Q7Z713 158 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 C20orf196Q8IYI0 205 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 OR5M8Q8NGP6 311 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 PRRT1Q99946 306 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 GPR87Q9BY21 358 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 NCOA6Q14686 2063 aaPredicted RBP9.38□□□□□ -0.91
CDH1-214ENST00000621016 A6NIZ1 184 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 ANGPTL7O43827 346 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 GLB1P16278 677 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 SNU13P55769 128 aaKnown RBP9.37□□□□□ -0.91
CDH1-214ENST00000621016 RAP1BP61224 184 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 CSNK2A1P68400 391 aaPredicted RBP9.37□□□□□ -0.91
CDH1-214ENST00000621016 PMS2P11Q13670 270 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 TDRG1Q3Y452 100 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 AADACL3Q5VUY0 350 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 D2HGDHQ8N465 521 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 CSNK2A3Q8NEV1 391 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 OR8B12Q8NGG6 310 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 TOMM40LQ969M1 308 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 PHYHIPLQ96FC7 376 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 CDC6Q99741 560 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 TMEM59Q9BXS4 323 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 PAM16Q9Y3D7 125 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 LHFPL6Q9Y693 200 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 MTCH2Q9Y6C9 303 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 CEP250Q9BV73 2442 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 LIPT2A6NK58 231 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 E9PLN8 166 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 M0R296 226 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 PRH1P02810 166 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 ALDH3B1P43353 468 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 CX3CR1P49238 355 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 DVL1P1P54792 670 aaPredicted RBP9.37□□□□□ -0.91
CDH1-214ENST00000621016 ELLP55199 621 aaPredicted RBP9.37□□□□□ -0.91
CDH1-214ENST00000621016 ERVFC1-1P60608 527 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 GAGE1Q13065 139 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 RHEBQ15382 184 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 GUK1Q16774 197 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 ZNF260Q3ZCT1 412 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 LDLRAD2Q5SZI1 272 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 LYG2Q86SG7 212 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 HDHD3Q9BSH5 251 aaPredicted RBP9.37□□□□□ -0.91
CDH1-214ENST00000621016 HDGFL3Q9Y3E1 203 aa9.37□□□□□ -0.91
CDH1-214ENST00000621016 DSPP15924 2871 aaKnown RBP9.37□□□□□ -0.91
CDH1-214ENST00000621016 LOC400499M0QZD8 3231 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 DFFBO76075 338 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 IGHV3-9P01782 118 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 CFIP05156 583 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 IGFBP3P17936 291 aaPredicted RBP9.36□□□□□ -0.91
CDH1-214ENST00000621016 BLVRBP30043 206 aaPredicted RBP9.36□□□□□ -0.91
CDH1-214ENST00000621016 RIPPLY1Q0D2K3 151 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 PLAC9Q5JTB6 97 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 OR2AE1Q8NHA4 323 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 RNF133Q8WVZ7 376 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 MRGPRFQ96AM1 343 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 UCN2Q96RP3 112 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 FAM206AQ9NX38 181 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 EP300Q09472 2414 aaPredicted RBP9.36□□□□□ -0.91
CDH1-214ENST00000621016 CACNA1GO43497 2377 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 ZNF724A8MTY0 619 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 H3BMH7 237 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 NUDT21O43809 227 aaKnown RBP9.36□□□□□ -0.91
CDH1-214ENST00000621016 RAD51DO75771 328 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 IGHG1P01857 330 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 BMI1P35226 326 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 OPRM1P35372 400 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 CEACAM6P40199 344 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 HSD17B11Q8NBQ5 300 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 SDSLQ96GA7 329 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 GPR27Q9NS67 375 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 EHFQ9NZC4 300 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 DNAJC13O75165 2243 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 H0YL77 283 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 CD5P06127 495 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 FCGR3AP08637 254 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 IFI6P09912 130 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 SRFP11831 508 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 FCGR2AP12318 317 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 MMP9P14780 707 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 APOBEC1P41238 236 aaKnown RBP9.36□□□□□ -0.91
CDH1-214ENST00000621016 VAMP2P63027 116 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 FDX2Q6P4F2 183 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 ZNF880Q6PDB4 577 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 PLXDC2Q6UX71 529 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 PEG10Q86TG7 708 aaKnown RBP9.36□□□□□ -0.91
CDH1-214ENST00000621016 OR51F2Q8NH61 342 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 OR5R1Q8NH85 324 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 DYRK2Q92630 601 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 RARRES2Q99969 163 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 OR2J1Q9GZK6 312 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 ZNF160Q9HCG1 818 aa9.36□□□□□ -0.91
CDH1-214ENST00000621016 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 A0A0A6YYD4 124 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 FAM230AA0A1W2PPH8 454 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 A0A1W2PQD3 144 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 BPNT1O95861 308 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 RRADP55042 308 aa9.35□□□□□ -0.91
CDH1-214ENST00000621016 CCL7P80098 99 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms