RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 IFT22Q9H7X7 185 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 ZNF701Q9NV72 531 aaPredicted RBP6.73□□□□□ -1.33
CPNE3-209ENST00000620393 DCAF16Q9NXF7 216 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 NLKQ9UBE8 527 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 IL36RNQ9UBH0 155 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 HSF4Q9ULV5 492 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 PLEKHA6Q9Y2H5 1048 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 WIPI2Q9Y4P8 454 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 PPIAL4AQ9Y536 164 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 V9GYH0 126 aa6.73□□□□□ -1.33
CPNE3-209ENST00000620393 USP9YO00507 2555 aaPredicted RBP6.73□□□□□ -1.33
CPNE3-209ENST00000620393 IGHV3OR15-7A0A075B7D8 119 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 TRAV38-1A0A0B4J264 116 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 TRAV24A0A0B4J272 114 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 A0A0G2JMP0 313 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 A0A0X1KG70 313 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 OOEPA6NGQ2 149 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 OR2AT4A6NND4 320 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 TNFRSF13BO14836 293 aaPredicted RBP6.72□□□□□ -1.33
CPNE3-209ENST00000620393 CTDSPLO15194 276 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 NDUFS7O75251 213 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 PDCD6O75340 191 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 CA11O75493 328 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 OR7C1O76099 320 aaPredicted RBP6.72□□□□□ -1.33
CPNE3-209ENST00000620393 LY6HO94772 140 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 ZNF205O95201 554 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 HAND1O96004 215 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 GSTP1P09211 210 aaKnown RBP6.72□□□□□ -1.33
CPNE3-209ENST00000620393 HIST1H1DP16402 221 aaKnown RBP6.72□□□□□ -1.33
CPNE3-209ENST00000620393 CHATP28329 748 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 CD80P33681 288 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 PPP5CP53041 499 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 SNU13P55769 128 aaKnown RBP6.72□□□□□ -1.33
CPNE3-209ENST00000620393 SCN1BQ07699 218 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 IKZF1Q13422 519 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 MADCAM1Q13477 382 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 IL18Q14116 193 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 ZNF79Q15937 498 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 ATAD3CQ5T2N8 411 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 ATPAF1Q5TC12 328 aaPredicted RBP6.72□□□□□ -1.33
CPNE3-209ENST00000620393 PEG10Q86TG7 708 aaKnown RBP6.72□□□□□ -1.33
CPNE3-209ENST00000620393 CD177Q8N6Q3 437 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 C19orf18Q8NEA5 215 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 OR4M2Q8NGB6 313 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 OR5T2Q8NGG2 359 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 ANGPTL6Q8NI99 470 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 ARHGAP5-AS1Q96IT6 56 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 PECRQ9BY49 303 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 WDR12Q9GZL7 423 aaKnown RBP6.72□□□□□ -1.33
CPNE3-209ENST00000620393 SPACA1Q9HBV2 294 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 TMEM165Q9HC07 324 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.72□□□□□ -1.33
CPNE3-209ENST00000620393 PLEKHJ1Q9NW61 149 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 ZNF581Q9P0T4 197 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 RCC2Q9P258 522 aaKnown RBP6.72□□□□□ -1.33
CPNE3-209ENST00000620393 DNAJB11Q9UBS4 358 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 EDARQ9UNE0 448 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 KCNK7Q9Y2U2 307 aa6.72□□□□□ -1.33
CPNE3-209ENST00000620393 IGKV1D-17A0A075B6S4 117 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 SERPINE3A8MV23 424 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 MCRIP1C9JLW8 97 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 SULT1C2O00338 296 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 SLC33A1O00400 549 aaPredicted RBP6.71□□□□□ -1.34
CPNE3-209ENST00000620393 MFNGO00587 321 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 NDUFA2O43678 99 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 OR2H2O95918 312 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 IGHV4-39P01824 125 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 ZNF44P15621 663 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 GNB3P16520 340 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 AMY2BP19961 511 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 CD40LGP29965 261 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 PRSS3P35030 304 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 GABRA2P47869 451 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 MRPS10P82664 201 aaKnown RBP6.71□□□□□ -1.34
CPNE3-209ENST00000620393 COL10A1Q03692 680 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 KCNJ8Q15842 424 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 PNLIPRP3Q17RR3 467 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 PYDC2Q56P42 97 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 NKAPLQ5M9Q1 402 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 HACD4Q5VWC8 232 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 STUMQ69YW2 141 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 ZNF788Q6ZQV5 615 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 DNM1P46Q6ZS02 220 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 C6orf201Q7Z4U5 140 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 SNX29P2Q8IUI4 249 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 GDPD1Q8N9F7 314 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 SUMF2Q8NBJ7 301 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 ST8SIA4Q92187 359 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 NRGNQ92686 78 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 RAB1CQ92928 201 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 SDSLQ96GA7 329 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 SDHCQ99643 169 aaPredicted RBP6.71□□□□□ -1.34
CPNE3-209ENST00000620393 SULT4A1Q9BR01 284 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 FAAP24Q9BTP7 215 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 DPCDQ9BVM2 203 aaPredicted RBP6.71□□□□□ -1.34
CPNE3-209ENST00000620393 SRRQ9GZT4 340 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 DNTTIP1Q9H147 329 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 CHODLQ9H9P2 273 aa6.71□□□□□ -1.34
CPNE3-209ENST00000620393 ZMAT3Q9HA38 289 aaKnown RBP6.71□□□□□ -1.34
CPNE3-209ENST00000620393 BARX1Q9HBU1 254 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms