RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 SAA4P35542 130 aa13.07□□□□□ -0.32
BRCA1-228ENST00000618469 DOC2BQ14184 412 aa13.07□□□□□ -0.32
BRCA1-228ENST00000618469 YIF1BQ5BJH7 314 aa13.07□□□□□ -0.32
BRCA1-228ENST00000618469 C6orf141Q5SZD1 244 aa13.07□□□□□ -0.32
BRCA1-228ENST00000618469 IZUMO2Q6UXV1 221 aa13.07□□□□□ -0.32
BRCA1-228ENST00000618469 ZNF782Q6ZMW2 699 aaPredicted RBP13.07□□□□□ -0.32
BRCA1-228ENST00000618469 ZSCAN4Q8NAM6 433 aaPredicted RBP13.07□□□□□ -0.32
BRCA1-228ENST00000618469 OR52N4Q8NGI2 321 aa13.07□□□□□ -0.32
BRCA1-228ENST00000618469 TNFAIP8L1Q8WVP5 186 aa13.07□□□□□ -0.32
BRCA1-228ENST00000618469 TAF15Q92804 592 aaKnown RBP eCLIP13.07□□□□□ -0.326e-6■□□□□ 11.2
BRCA1-228ENST00000618469 ORAI1Q96D31 301 aa13.07□□□□□ -0.32
BRCA1-228ENST00000618469 ERGIC3Q9Y282 383 aa13.07□□□□□ -0.32
BRCA1-228ENST00000618469 FAM96BQ9Y3D0 163 aa13.07□□□□□ -0.32
BRCA1-228ENST00000618469 DSCAML1Q8TD84 2053 aa13.07□□□□□ -0.32
BRCA1-228ENST00000618469 TRBV5-5A0A0J9YX44 114 aa13.06□□□□□ -0.32
BRCA1-228ENST00000618469 MEIOCA2RUB1 952 aa13.06□□□□□ -0.32
BRCA1-228ENST00000618469 OR2H2O95918 312 aa13.06□□□□□ -0.32
BRCA1-228ENST00000618469 CDK1P06493 297 aa13.06□□□□□ -0.32
BRCA1-228ENST00000618469 FBP1P09467 338 aa13.06□□□□□ -0.32
BRCA1-228ENST00000618469 HKR1P10072 659 aa13.06□□□□□ -0.32
BRCA1-228ENST00000618469 ZNF44P15621 663 aa13.06□□□□□ -0.32
BRCA1-228ENST00000618469 COX7A1P24310 79 aa13.06□□□□□ -0.32
BRCA1-228ENST00000618469 OR3A1P47881 315 aa13.06□□□□□ -0.32
BRCA1-228ENST00000618469 UBE2E1P51965 193 aa13.06□□□□□ -0.32
BRCA1-228ENST00000618469 Q499Y3 187 aa13.06□□□□□ -0.32
BRCA1-228ENST00000618469 DDI2Q5TDH0 399 aa13.06□□□□□ -0.32
BRCA1-228ENST00000618469 HCP5Q6MZN7 132 aa13.06□□□□□ -0.32
BRCA1-228ENST00000618469 TCF23Q7RTU1 214 aa13.06□□□□□ -0.32
BRCA1-228ENST00000618469 LDLRAD3Q86YD5 345 aa13.06□□□□□ -0.32
BRCA1-228ENST00000618469 TPRX1Q8N7U7 411 aa13.06□□□□□ -0.32
BRCA1-228ENST00000618469 OR4S1Q8NGB4 309 aa13.06□□□□□ -0.32
BRCA1-228ENST00000618469 TBC1D15Q8TC07 691 aa13.06□□□□□ -0.32
BRCA1-228ENST00000618469 SSMEM1Q8WWF3 244 aa13.06□□□□□ -0.32
BRCA1-228ENST00000618469 OR14A2Q96R54 314 aa13.06□□□□□ -0.32
BRCA1-228ENST00000618469 RHOFQ9HBH0 211 aa13.06□□□□□ -0.32
BRCA1-228ENST00000618469 SCN3BQ9NY72 215 aa13.06□□□□□ -0.32
BRCA1-228ENST00000618469 hCG_1809904A0A1W2PP81 198 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 A0A1W2PPE2 198 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 A0A1W2PR64 198 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 A0A1W2PRV1 198 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 PTGES3LE9PB15 166 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 SH2D1BO14796 132 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 PAHP00439 452 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 IGHV4-59P01825 116 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 CELP19835 753 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 MYF6P23409 242 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 OR3A4PP47883 348 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 ERVFRD-1P60508 538 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 RPS11P62280 158 aaKnown RBP eCLIP13.05□□□□□ -0.32
BRCA1-228ENST00000618469 RIPK1Q13546 671 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 TREML4Q6UXN2 200 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 TMEM86BQ8N661 226 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 NANOGP1Q8N7R0 232 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 PPP1R35Q8TAP8 253 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 SGCDQ92629 289 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 MYDGFQ969H8 173 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 ZNF714Q96N38 554 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 ZNF747Q9BV97 191 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 MND1Q9BWT6 205 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 ANKRD60Q9BZ19 345 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 CHIAQ9BZP6 476 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 PPA2Q9H2U2 334 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 ZNF696Q9H7X3 374 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 SEBOXQ9HB31 216 aaPredicted RBP13.05□□□□□ -0.32
BRCA1-228ENST00000618469 TMEM138Q9NPI0 162 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 PAK1IP1Q9NWT1 392 aaPredicted RBP13.05□□□□□ -0.32
BRCA1-228ENST00000618469 ZNRD1Q9P1U0 126 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 CKLFQ9UBR5 152 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 SF3B6Q9Y3B4 125 aaKnown RBP13.05□□□□□ -0.32
BRCA1-228ENST00000618469 POMT1Q9Y6A1 747 aa13.05□□□□□ -0.32
BRCA1-228ENST00000618469 hADV38S2A0JD32 116 aa13.04□□□□□ -0.32
BRCA1-228ENST00000618469 MAGEA13PA6NCF6 341 aa13.04□□□□□ -0.32
BRCA1-228ENST00000618469 MGST3O14880 152 aa13.04□□□□□ -0.32
BRCA1-228ENST00000618469 ZNF728P0DKX0 622 aa13.04□□□□□ -0.32
BRCA1-228ENST00000618469 FSTP19883 344 aa13.04□□□□□ -0.32
BRCA1-228ENST00000618469 BDKRB2P30411 391 aa13.04□□□□□ -0.32
BRCA1-228ENST00000618469 ZNF93P35789 620 aaPredicted RBP13.04□□□□□ -0.32
BRCA1-228ENST00000618469 HSPA13P48723 471 aa13.04□□□□□ -0.32
BRCA1-228ENST00000618469 MTNR1BP49286 362 aa13.04□□□□□ -0.32
BRCA1-228ENST00000618469 BMXP51813 675 aa13.04□□□□□ -0.32
BRCA1-228ENST00000618469 DLX6P56179 175 aa13.04□□□□□ -0.32
BRCA1-228ENST00000618469 SCN1BQ07699 218 aa13.04□□□□□ -0.32
BRCA1-228ENST00000618469 ACSM1Q08AH1 577 aa13.04□□□□□ -0.32
BRCA1-228ENST00000618469 C16orf87Q6PH81 154 aa13.04□□□□□ -0.32
BRCA1-228ENST00000618469 C11orf42Q8N5U0 333 aa13.04□□□□□ -0.32
BRCA1-228ENST00000618469 PXT1Q8NFP0 134 aa13.04□□□□□ -0.32
BRCA1-228ENST00000618469 OR10K1Q8NGX5 313 aa13.04□□□□□ -0.32
BRCA1-228ENST00000618469 HEXA-AS1Q9H8Q6 139 aa13.04□□□□□ -0.32
BRCA1-228ENST00000618469 TRAV8-7A0A075B6U6 113 aa13.03□□□□□ -0.32
BRCA1-228ENST00000618469 FAM181BA6NEQ2 426 aa13.03□□□□□ -0.32
BRCA1-228ENST00000618469 C17orf98A8MV24 154 aa13.03□□□□□ -0.32
BRCA1-228ENST00000618469 ATP6V1G2O95670 118 aa13.03□□□□□ -0.32
BRCA1-228ENST00000618469 ALDOBP05062 364 aa13.03□□□□□ -0.32
BRCA1-228ENST00000618469 IGFBP3P17936 291 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-228ENST00000618469 IER3P46695 156 aa13.03□□□□□ -0.32
BRCA1-228ENST00000618469 P2RX3P56373 397 aa13.03□□□□□ -0.32
BRCA1-228ENST00000618469 MEF2CQ06413 473 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-228ENST00000618469 FOXL1Q12952 345 aa13.03□□□□□ -0.32
BRCA1-228ENST00000618469 ATXN7L3Q14CW9 347 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-228ENST00000618469 RSU1Q15404 277 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms