RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 ZNF587Q96SQ5 575 aaPredicted RBP4.89□□□□□ -1.63
CPNE4-214ENST00000617767 AMELYQ99218 206 aa4.89□□□□□ -1.63
CPNE4-214ENST00000617767 GINS3Q9BRX5 216 aa4.89□□□□□ -1.63
CPNE4-214ENST00000617767 CHST6Q9GZX3 395 aa4.89□□□□□ -1.63
CPNE4-214ENST00000617767 PARP12Q9H0J9 701 aaKnown RBP4.89□□□□□ -1.63
CPNE4-214ENST00000617767 METTL7AQ9H8H3 244 aa4.89□□□□□ -1.63
CPNE4-214ENST00000617767 HIF1ANQ9NWT6 349 aa4.89□□□□□ -1.63
CPNE4-214ENST00000617767 ROS1P08922 2347 aa4.89□□□□□ -1.63
CPNE4-214ENST00000617767 ANKRD11Q6UB99 2663 aaPredicted RBP4.88□□□□□ -1.63
CPNE4-214ENST00000617767 POLEQ07864 2286 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 TMED7-TICAM2A0A0A6YYA0 188 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 IGHV2-70DA0A0C4DH43 119 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 NAP1L6A6NFF2 107 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 FRG2CA6NGY1 282 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 K7ERU9 68 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 CSF1P09603 554 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 PGAM2P15259 253 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 SLC2A5P22732 501 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 OTX2P32243 289 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 FHITP49789 147 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 IL24Q13007 206 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 ACSM3Q53FZ2 586 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 PRR27Q6MZM9 219 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 BHLHA15Q7RTS1 189 aaPredicted RBP4.88□□□□□ -1.63
CPNE4-214ENST00000617767 ANKRD37Q7Z713 158 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 LINC00346Q8IVM7 164 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 TMEM105Q8N8V8 129 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 SLC30A7Q8NEW0 376 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 STEAP2Q8NFT2 490 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 OR4D6Q8NGJ1 314 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 OR4D5Q8NGN0 318 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 OR5M8Q8NGP6 311 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 OR10AC1Q8NH08 325 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 SLC25A38Q96DW6 304 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 PELI1Q96FA3 418 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 CAMK2AQ9UQM7 478 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 TMED7Q9Y3B3 224 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 XKRYO14609 159 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 SLC16A7O60669 478 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 TOMM40O96008 361 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 CST4P01036 141 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 CLDN18P56856 261 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 PMP22Q01453 160 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 PMS2P11Q13670 270 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 RSPO4Q2I0M5 234 aaPredicted RBP4.88□□□□□ -1.63
CPNE4-214ENST00000617767 RHBDD2Q6NTF9 364 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 WDR74Q6RFH5 385 aaPredicted RBP4.88□□□□□ -1.63
CPNE4-214ENST00000617767 PLXDC2Q6UX71 529 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 TMEM144Q7Z5S9 345 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 TMED4Q7Z7H5 227 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 MRGPREQ86SM8 312 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 COMMD1Q8N668 190 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 ZNF738Q8NE65 137 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 PLPP5Q8NEB5 264 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 OR51A4Q8NGJ6 313 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 MITD1Q8WV92 249 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 PPP1R1CQ8WVI7 109 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 CIB3Q96Q77 187 aaPredicted RBP4.88□□□□□ -1.63
CPNE4-214ENST00000617767 CITED1Q99966 193 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 EIF5A2Q9GZV4 153 aaKnown RBP4.88□□□□□ -1.63
CPNE4-214ENST00000617767 NELFAQ9H3P2 528 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 KCNK15Q9H427 330 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 CNTD2Q9H8S5 307 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 WFDC1Q9HC57 220 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 FKBP11Q9NYL4 201 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 B3GALT1Q9Y5Z6 326 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 ZZEF1O43149 2961 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 IGHV3-15A0A0B4J1V0 119 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 ZNHIT1O43257 154 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 GSTZ1O43708 216 aaPredicted RBP4.88□□□□□ -1.63
CPNE4-214ENST00000617767 NME2P1O60361 137 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 LRP3O75074 770 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 WNT11O96014 354 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 IGHA1P01876 353 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 MAS1P04201 325 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 PSG1P11464 419 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 UCP1P25874 307 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 CEBPDP49716 269 aaPredicted RBP4.88□□□□□ -1.63
CPNE4-214ENST00000617767 DUSP3P51452 185 aaPredicted RBP4.88□□□□□ -1.63
CPNE4-214ENST00000617767 NANOS3P60323 173 aaKnown RBP4.88□□□□□ -1.63
CPNE4-214ENST00000617767 ERVS71-1P61550 626 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 ZXDAP98168 799 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 RBPJQ06330 500 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 VAMP3Q15836 100 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 ACKR1Q16570 336 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.88□□□□□ -1.63
CPNE4-214ENST00000617767 ZNF485Q8NCK3 441 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 OR1P1Q8NH06 330 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 ABHD4Q8TB40 342 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 TMEM186Q96B77 213 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 GNRHR2Q96P88 292 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 DERL3Q96Q80 235 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 TBX15Q96SF7 602 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 ABHD14AQ9BUJ0 271 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 DUSP23Q9BVJ7 150 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 DEFB126Q9BYW3 111 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 ZNF552Q9H707 407 aaPredicted RBP4.88□□□□□ -1.63
CPNE4-214ENST00000617767 OR6C3Q9NZP0 311 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 HSPB7Q9UBY9 170 aa4.88□□□□□ -1.63
CPNE4-214ENST00000617767 FOXD3Q9UJU5 478 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms