RNA–Protein interactions for RNA: ENST00000617451.4

PTPRF-216, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5 BASIC

Gene PTPRF, Length 1,129 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-216ENST00000617451 PRKACAP17612 351 aa19.89■□□□□ 0.77
PTPRF-216ENST00000617451 KIR3DL2P43630 455 aa19.89■□□□□ 0.77
PTPRF-216ENST00000617451 POU3F4P49335 361 aa19.89■□□□□ 0.77
PTPRF-216ENST00000617451 SNU13P55769 128 aaKnown RBP19.89■□□□□ 0.77
PTPRF-216ENST00000617451 MTCP1P56278 107 aa19.89■□□□□ 0.77
PTPRF-216ENST00000617451 SLC35A2P78381 396 aa19.89■□□□□ 0.77
PTPRF-216ENST00000617451 ATP6AP1Q15904 470 aa19.89■□□□□ 0.77
PTPRF-216ENST00000617451 ABCA11PQ4W5N1 156 aa19.89■□□□□ 0.77
PTPRF-216ENST00000617451 PRAMEF5Q5TYX0 476 aa19.89■□□□□ 0.77
PTPRF-216ENST00000617451 HEPN1Q6WQI6 88 aa19.89■□□□□ 0.77
PTPRF-216ENST00000617451 ZNF596Q8TC21 504 aa19.89■□□□□ 0.77
PTPRF-216ENST00000617451 CAPSLQ8WWF8 208 aa19.89■□□□□ 0.77
PTPRF-216ENST00000617451 MYDGFQ969H8 173 aa19.89■□□□□ 0.77
PTPRF-216ENST00000617451 RNF166Q96A37 237 aaPredicted RBP19.89■□□□□ 0.77
PTPRF-216ENST00000617451 ADAT3Q96EY9 351 aaPredicted RBP19.89■□□□□ 0.77
PTPRF-216ENST00000617451 SLC25A33Q9BSK2 321 aa19.89■□□□□ 0.77
PTPRF-216ENST00000617451 GAL3ST2Q9H3Q3 398 aa19.89■□□□□ 0.77
PTPRF-216ENST00000617451 TRGV10A0A0A0MS01 117 aa19.88■□□□□ 0.77
PTPRF-216ENST00000617451 LPLP06858 475 aa19.88■□□□□ 0.77
PTPRF-216ENST00000617451 CDK2P24941 298 aa19.88■□□□□ 0.77
PTPRF-216ENST00000617451 ISL1P61371 349 aa19.88■□□□□ 0.77
PTPRF-216ENST00000617451 UTS2BQ765I0 119 aa19.88■□□□□ 0.77
PTPRF-216ENST00000617451 CORO2AQ92828 525 aa19.88■□□□□ 0.77
PTPRF-216ENST00000617451 RCC1LQ96I51 464 aaKnown RBP19.88■□□□□ 0.77
PTPRF-216ENST00000617451 RBM14Q96PK6 669 aaKnown RBP19.88■□□□□ 0.77
PTPRF-216ENST00000617451 GABARAPL1Q9H0R8 117 aa19.88■□□□□ 0.77
PTPRF-216ENST00000617451 HMG20AQ9NP66 347 aa19.88■□□□□ 0.77
PTPRF-216ENST00000617451 ENOPH1Q9UHY7 261 aa19.88■□□□□ 0.77
PTPRF-216ENST00000617451 LEUTXA8MZ59 168 aa19.87■□□□□ 0.77
PTPRF-216ENST00000617451 SIRPB1O00241 398 aa19.87■□□□□ 0.77
PTPRF-216ENST00000617451 SH2D1BO14796 132 aa19.87■□□□□ 0.77
PTPRF-216ENST00000617451 OR2F2O95006 317 aa19.87■□□□□ 0.77
PTPRF-216ENST00000617451 AMY1AP04745 511 aa19.87■□□□□ 0.77
PTPRF-216ENST00000617451 AMY2AP04746 511 aa19.87■□□□□ 0.77
PTPRF-216ENST00000617451 ATF1P18846 271 aa19.87■□□□□ 0.77
PTPRF-216ENST00000617451 PRKACBP22694 351 aa19.87■□□□□ 0.77
PTPRF-216ENST00000617451 ARHGDIBP52566 201 aa19.87■□□□□ 0.77
PTPRF-216ENST00000617451 PDZK1IP1Q13113 114 aa19.87■□□□□ 0.77
PTPRF-216ENST00000617451 VAX1Q5SQQ9 334 aa19.87■□□□□ 0.77
PTPRF-216ENST00000617451 ZDHHC13Q8IUH4 622 aa19.87■□□□□ 0.77
PTPRF-216ENST00000617451 OR4X2Q8NGF9 303 aa19.87■□□□□ 0.77
PTPRF-216ENST00000617451 TAS2R3Q9NYW6 316 aa19.87■□□□□ 0.77
PTPRF-216ENST00000617451 GNG8Q9UK08 70 aa19.87■□□□□ 0.77
PTPRF-216ENST00000617451 HHLA2Q9UM44 414 aa19.87■□□□□ 0.77
PTPRF-216ENST00000617451 OR2H2O95918 312 aa19.86■□□□□ 0.77
PTPRF-216ENST00000617451 CD34P28906 385 aa19.86■□□□□ 0.77
PTPRF-216ENST00000617451 ATP6V1E1P36543 226 aa19.86■□□□□ 0.77
PTPRF-216ENST00000617451 TP53I3Q53FA7 332 aa19.86■□□□□ 0.77
PTPRF-216ENST00000617451 C10orf99Q6UWK7 81 aa19.86■□□□□ 0.77
PTPRF-216ENST00000617451 LHFPL2Q6ZUX7 228 aa19.86■□□□□ 0.77
PTPRF-216ENST00000617451 CIB1Q99828 191 aa19.86■□□□□ 0.77
PTPRF-216ENST00000617451 EXOSC4Q9NPD3 245 aaKnown RBP19.86■□□□□ 0.77
PTPRF-216ENST00000617451 INPP5EQ9NRR6 644 aa19.86■□□□□ 0.77
PTPRF-216ENST00000617451 GSTK1Q9Y2Q3 226 aa19.86■□□□□ 0.77
PTPRF-216ENST00000617451 FUOMA2VDF0 154 aa19.85■□□□□ 0.77
PTPRF-216ENST00000617451 LMO1P25800 156 aa19.85■□□□□ 0.77
PTPRF-216ENST00000617451 POLR2IP36954 125 aaKnown RBP19.85■□□□□ 0.77
PTPRF-216ENST00000617451 GDNFP39905 211 aa19.85■□□□□ 0.77
PTPRF-216ENST00000617451 GLIPR1P48060 266 aa19.85■□□□□ 0.77
PTPRF-216ENST00000617451 ZNF85Q03923 595 aa19.85■□□□□ 0.77
PTPRF-216ENST00000617451 AESQ08117 197 aa19.85■□□□□ 0.77
PTPRF-216ENST00000617451 TMED1Q13445 227 aa19.85■□□□□ 0.77
PTPRF-216ENST00000617451 TMEM244Q5VVB8 128 aa19.85■□□□□ 0.77
PTPRF-216ENST00000617451 FAM220AQ7Z4H9 259 aa19.85■□□□□ 0.77
PTPRF-216ENST00000617451 OR2G2Q8NGZ5 317 aa19.85■□□□□ 0.77
PTPRF-216ENST00000617451 EME1Q96AY2 570 aa19.85■□□□□ 0.77
PTPRF-216ENST00000617451 CREB3L1Q96BA8 519 aa19.85■□□□□ 0.77
PTPRF-216ENST00000617451 SPSB1Q96BD6 273 aa19.85■□□□□ 0.77
PTPRF-216ENST00000617451 FGGYQ96C11 551 aa19.85■□□□□ 0.77
PTPRF-216ENST00000617451 ZNF286AQ9HBT8 521 aa19.85■□□□□ 0.77
PTPRF-216ENST00000617451 TENM3Q9P273 2699 aa19.85■□□□□ 0.77
PTPRF-216ENST00000617451 IGKV1-12A0A0C4DH73 117 aa19.84■□□□□ 0.77
PTPRF-216ENST00000617451 FAM172BPA6NC97 362 aa19.84■□□□□ 0.77
PTPRF-216ENST00000617451 SH2D7A6NKC9 451 aaPredicted RBP19.84■□□□□ 0.77
PTPRF-216ENST00000617451 LY6LH3BQJ8 138 aa19.84■□□□□ 0.77
PTPRF-216ENST00000617451 DUS4LO95620 317 aaKnown RBP19.84■□□□□ 0.77
PTPRF-216ENST00000617451 IGKV1D-12P01611 117 aa19.84■□□□□ 0.77
PTPRF-216ENST00000617451 CEACAM3P40198 252 aa19.84■□□□□ 0.77
PTPRF-216ENST00000617451 KRTAP10-11P60412 298 aa19.84■□□□□ 0.77
PTPRF-216ENST00000617451 KPNB1Q14974 876 aaKnown RBP19.84■□□□□ 0.77
PTPRF-216ENST00000617451 OR8J1Q8NGP2 316 aa19.84■□□□□ 0.77
PTPRF-216ENST00000617451 BCAS4Q8TDM0 211 aa19.84■□□□□ 0.77
PTPRF-216ENST00000617451 OPALINQ96PE5 141 aa19.84■□□□□ 0.77
PTPRF-216ENST00000617451 COMMD4Q9H0A8 199 aa19.84■□□□□ 0.77
PTPRF-216ENST00000617451 ODAMA1E959 279 aa19.83■□□□□ 0.77
PTPRF-216ENST00000617451 BUB1B-PAK6H3BSN5 160 aa19.83■□□□□ 0.77
PTPRF-216ENST00000617451 KDM4BO94953 1096 aa19.83■□□□□ 0.77
PTPRF-216ENST00000617451 ISG15P05161 165 aa19.83■□□□□ 0.77
PTPRF-216ENST00000617451 FASP25445 335 aa19.83■□□□□ 0.77
PTPRF-216ENST00000617451 HLA-DRB5Q30154 266 aa19.83■□□□□ 0.77
PTPRF-216ENST00000617451 TPTE2P1Q5T6R2 138 aa19.83■□□□□ 0.77
PTPRF-216ENST00000617451 RFKQ969G6 155 aa19.83■□□□□ 0.77
PTPRF-216ENST00000617451 RFT1Q96AA3 541 aa19.83■□□□□ 0.77
PTPRF-216ENST00000617451 MBOAT4Q96T53 435 aa19.83■□□□□ 0.77
PTPRF-216ENST00000617451 FRRS1LQ9P0K9 344 aa19.83■□□□□ 0.77
PTPRF-216ENST00000617451 A0A087X0M5 115 aa19.82■□□□□ 0.76
PTPRF-216ENST00000617451 A0A1B0GX30 115 aa19.82■□□□□ 0.76
PTPRF-216ENST00000617451 WI2-2373I1.2A0A1W2PRP0 233 aa19.82■□□□□ 0.76
PTPRF-216ENST00000617451 TOR1AO14656 332 aa19.82■□□□□ 0.76
PTPRF-216ENST00000617451 CLIC3O95833 236 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms