RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 OR2M3Q8NG83 312 aa12.29□□□□□ -0.44
CHD1-212ENST00000614616 P2RX4Q99571 388 aa12.29□□□□□ -0.44
CHD1-212ENST00000614616 OR2J1Q9GZK6 312 aa12.29□□□□□ -0.44
CHD1-212ENST00000614616 PRSS1P07477 247 aa12.29□□□□□ -0.44
CHD1-212ENST00000614616 HIST1H1EP10412 219 aaKnown RBP12.29□□□□□ -0.44
CHD1-212ENST00000614616 C21orf58P58505 322 aa12.29□□□□□ -0.44
CHD1-212ENST00000614616 WDR38Q5JTN6 314 aa12.29□□□□□ -0.44
CHD1-212ENST00000614616 SLC35E4Q6ICL7 350 aa12.29□□□□□ -0.44
CHD1-212ENST00000614616 LIAT1Q6ZQX7 453 aa12.29□□□□□ -0.44
CHD1-212ENST00000614616 PKIBQ9C010 78 aa12.29□□□□□ -0.44
CHD1-212ENST00000614616 CNIH1O95406 144 aa12.28□□□□□ -0.44
CHD1-212ENST00000614616 DMKNQ6E0U4 476 aaPredicted RBP12.28□□□□□ -0.44
CHD1-212ENST00000614616 BCORP1Q8N888 145 aa12.28□□□□□ -0.44
CHD1-212ENST00000614616 SMIM14Q96QK8 99 aa12.28□□□□□ -0.44
CHD1-212ENST00000614616 GPR62Q9BZJ7 368 aa12.28□□□□□ -0.44
CHD1-212ENST00000614616 ACSM6Q6P461 480 aa12.28□□□□□ -0.44
CHD1-212ENST00000614616 AAED1Q7RTV5 226 aa12.28□□□□□ -0.44
CHD1-212ENST00000614616 MS4A6EQ96DS6 147 aa12.28□□□□□ -0.44
CHD1-212ENST00000614616 NDUFAF3Q9BU61 184 aa12.28□□□□□ -0.44
CHD1-212ENST00000614616 LANCL2Q9NS86 450 aa12.28□□□□□ -0.44
CHD1-212ENST00000614616 SP1P08047 785 aa12.28□□□□□ -0.44
CHD1-212ENST00000614616 TRGC1P0CF51 173 aa12.28□□□□□ -0.44
CHD1-212ENST00000614616 SCGB1A1P11684 91 aa12.28□□□□□ -0.44
CHD1-212ENST00000614616 NMUP48645 174 aa12.28□□□□□ -0.44
CHD1-212ENST00000614616 CLDN15P56746 228 aa12.28□□□□□ -0.44
CHD1-212ENST00000614616 DNLZQ5SXM8 178 aa12.28□□□□□ -0.44
CHD1-212ENST00000614616 OR11L1Q8NGX0 322 aa12.28□□□□□ -0.44
CHD1-212ENST00000614616 SLC25A43Q8WUT9 341 aaPredicted RBP12.28□□□□□ -0.44
CHD1-212ENST00000614616 CNTD2Q9H8S5 307 aa12.28□□□□□ -0.44
CHD1-212ENST00000614616 FAM221AA4D161 298 aa12.28□□□□□ -0.44
CHD1-212ENST00000614616 KLF7O75840 302 aaPredicted RBP12.28□□□□□ -0.44
CHD1-212ENST00000614616 PARS2Q7L3T8 475 aaKnown RBP12.28□□□□□ -0.44
CHD1-212ENST00000614616 CACNG5Q9UF02 275 aa12.28□□□□□ -0.44
CHD1-212ENST00000614616 CDC42EP3Q9UKI2 254 aa12.28□□□□□ -0.44
CHD1-212ENST00000614616 GUSBP08236 651 aa12.28□□□□□ -0.44
CHD1-212ENST00000614616 SSX8Q7RTT4 187 aa12.28□□□□□ -0.44
CHD1-212ENST00000614616 GVQW1Q8N7I0 195 aa12.28□□□□□ -0.44
CHD1-212ENST00000614616 BOKQ9UMX3 212 aaPredicted RBP12.28□□□□□ -0.44
CHD1-212ENST00000614616 ETHE1O95571 254 aa12.28□□□□□ -0.44
CHD1-212ENST00000614616 SLC25A5P05141 298 aaKnown RBP12.28□□□□□ -0.44
CHD1-212ENST00000614616 OR8B8Q15620 311 aa12.28□□□□□ -0.44
CHD1-212ENST00000614616 METRNLQ641Q3 311 aa12.28□□□□□ -0.44
CHD1-212ENST00000614616 DNAJC4Q9NNZ3 241 aa12.28□□□□□ -0.44
CHD1-212ENST00000614616 MDH2P40926 338 aaKnown RBP12.27□□□□□ -0.44
CHD1-212ENST00000614616 KISS1Q15726 138 aa12.27□□□□□ -0.44
CHD1-212ENST00000614616 HNRNPA1L2Q32P51 320 aaKnown RBP12.27□□□□□ -0.44
CHD1-212ENST00000614616 MMACHCQ9Y4U1 282 aa12.27□□□□□ -0.44
CHD1-212ENST00000614616 SNAI1O95863 264 aaPredicted RBP12.27□□□□□ -0.44
CHD1-212ENST00000614616 GLRX5Q86SX6 157 aa12.27□□□□□ -0.44
CHD1-212ENST00000614616 OR11H4Q8NGC9 324 aa12.27□□□□□ -0.44
CHD1-212ENST00000614616 SPPL3Q8TCT6 385 aa12.27□□□□□ -0.44
CHD1-212ENST00000614616 SPSB1Q96BD6 273 aa12.27□□□□□ -0.44
CHD1-212ENST00000614616 SRSF10O75494 262 aaKnown RBP12.27□□□□□ -0.44
CHD1-212ENST00000614616 CTBSQ01459 385 aa12.27□□□□□ -0.44
CHD1-212ENST00000614616 GNB4Q9HAV0 340 aa12.27□□□□□ -0.44
CHD1-212ENST00000614616 A0A1B0GTL3 188 aa12.27□□□□□ -0.45
CHD1-212ENST00000614616 FAM216AQ8WUB2 273 aa12.27□□□□□ -0.45
CHD1-212ENST00000614616 ALG14Q96F25 216 aa12.27□□□□□ -0.45
CHD1-212ENST00000614616 TLCD2A6NGC4 264 aa12.27□□□□□ -0.45
CHD1-212ENST00000614616 RER1O15258 196 aa12.27□□□□□ -0.45
CHD1-212ENST00000614616 ORM1P02763 201 aa12.27□□□□□ -0.45
CHD1-212ENST00000614616 MRGPREQ86SM8 312 aa12.27□□□□□ -0.45
CHD1-212ENST00000614616 ZDHHC23Q8IYP9 409 aa12.27□□□□□ -0.45
CHD1-212ENST00000614616 S1PR3Q99500 378 aa12.27□□□□□ -0.45
CHD1-212ENST00000614616 WDR13Q9H1Z4 485 aa12.27□□□□□ -0.45
CHD1-212ENST00000614616 KCNE5Q9UJ90 142 aa12.27□□□□□ -0.45
CHD1-212ENST00000614616 B9D1Q9UPM9 204 aa12.27□□□□□ -0.45
CHD1-212ENST00000614616 SMPD2O60906 423 aa12.27□□□□□ -0.45
CHD1-212ENST00000614616 ANKRD34CP0C6C1 535 aa12.27□□□□□ -0.45
CHD1-212ENST00000614616 KIR2DS2P43631 304 aa12.27□□□□□ -0.45
CHD1-212ENST00000614616 NPBWR2P48146 333 aa12.27□□□□□ -0.45
CHD1-212ENST00000614616 SERF2P84101 59 aa12.27□□□□□ -0.45
CHD1-212ENST00000614616 IGSF23A1L1A6 192 aa12.27□□□□□ -0.45
CHD1-212ENST00000614616 ABHD17BQ5VST6 288 aa12.27□□□□□ -0.45
CHD1-212ENST00000614616 MSRB3Q8IXL7 192 aa12.27□□□□□ -0.45
CHD1-212ENST00000614616 WNT2BQ93097 391 aa12.27□□□□□ -0.45
CHD1-212ENST00000614616 KTI12Q96EK9 354 aaPredicted RBP12.27□□□□□ -0.45
CHD1-212ENST00000614616 MENTQ9BUN1 341 aa12.27□□□□□ -0.45
CHD1-212ENST00000614616 MMP9P14780 707 aa12.26□□□□□ -0.45
CHD1-212ENST00000614616 COMPP49747 757 aaPredicted RBP12.26□□□□□ -0.45
CHD1-212ENST00000614616 EWSR1Q01844 656 aaKnown RBP eCLIP12.26□□□□□ -0.459e-7■■■■□ 25.9
CHD1-212ENST00000614616 DEFB118Q96PH6 123 aa12.26□□□□□ -0.45
CHD1-212ENST00000614616 OR11G2Q8NGC1 345 aa12.26□□□□□ -0.45
CHD1-212ENST00000614616 AQP10Q96PS8 301 aa12.26□□□□□ -0.45
CHD1-212ENST00000614616 OR6C1Q96RD1 312 aa12.26□□□□□ -0.45
CHD1-212ENST00000614616 PRAMEF26H0Y7S4 382 aa12.26□□□□□ -0.45
CHD1-212ENST00000614616 VAMP5O95183 116 aa12.26□□□□□ -0.45
CHD1-212ENST00000614616 HNRNPA1P09651 372 aaKnown RBP eCLIP12.26□□□□□ -0.45
CHD1-212ENST00000614616 FUT3P21217 361 aa12.26□□□□□ -0.45
CHD1-212ENST00000614616 PCGF1Q9BSM1 259 aa12.26□□□□□ -0.45
CHD1-212ENST00000614616 TPRP12270 2363 aaKnown RBP12.26□□□□□ -0.45
CHD1-212ENST00000614616 LBX1P52954 281 aa12.26□□□□□ -0.45
CHD1-212ENST00000614616 RPS15P62841 145 aaKnown RBP12.26□□□□□ -0.45
CHD1-212ENST00000614616 CCSMST1Q4G0I0 132 aa12.26□□□□□ -0.45
CHD1-212ENST00000614616 MYOZ3Q8TDC0 251 aa12.26□□□□□ -0.45
CHD1-212ENST00000614616 MRPL18Q9H0U6 180 aaKnown RBP12.26□□□□□ -0.45
CHD1-212ENST00000614616 EDDM3AQ14507 147 aa12.26□□□□□ -0.45
CHD1-212ENST00000614616 HERPUD1Q15011 391 aa12.26□□□□□ -0.45
CHD1-212ENST00000614616 TMEFF1Q8IYR6 380 aa12.26□□□□□ -0.45
CHD1-212ENST00000614616 OR10X1Q8NGY0 326 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms