RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 NRIP2Q9BQI9 281 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 TCEAL7Q9BRU2 100 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 RTL8AQ9BWD3 113 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 ARRDC1-AS1Q9H2J1 176 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 RIMS4Q9H426 269 aaPredicted RBP7.57□□□□□ -1.2
LIG4-204ENST00000611712 PLK3Q9H4B4 646 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 GNG13Q9P2W3 67 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 KLF13Q9Y2Y9 288 aaPredicted RBP7.57□□□□□ -1.2
LIG4-204ENST00000611712 TICRRQ7Z2Z1 1910 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 IGKV1-9A0A0C4DH69 117 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 RNF212BA8MTL3 300 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 MPPED1O15442 326 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 CALCRP30988 508 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 RAB13P51153 203 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 SPANXN5Q5MJ07 72 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 OR2T2Q6IF00 324 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 BIVMQ86UB2 503 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 OR5C1Q8NGR4 320 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 ERRFI1Q9UJM3 462 aaPredicted RBP7.56□□□□□ -1.2
LIG4-204ENST00000611712 H7C1Q1 480 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 LINC01387J3KSC0 135 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 COX6A1P12074 109 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 NFYBP25208 207 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 ELLP55199 621 aaPredicted RBP7.56□□□□□ -1.2
LIG4-204ENST00000611712 CATR1Q13166 79 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 SLC25A53Q5H9E4 307 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 OR2B11Q5JQS5 317 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 RNF144BQ7Z419 303 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 SKA3Q8IX90 412 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 TUSC5Q8IXB3 177 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 PFDN5Q99471 154 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 SRXN1Q9BYN0 137 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 ENY2Q9NPA8 101 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 SLC39A9Q9NUM3 307 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 TPRP12270 2363 aaKnown RBP7.56□□□□□ -1.2
LIG4-204ENST00000611712 CEP250Q9BV73 2442 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 CYC1P08574 325 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 PI4KAP42356 2102 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 GNG3P63215 75 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 EIF2S3LQ2VIR3 472 aaKnown RBP7.56□□□□□ -1.2
LIG4-204ENST00000611712 C10orf128Q5T292 105 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 GLRX5Q86SX6 157 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 TBC1D26Q86UD7 250 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 OR10AD1Q8NGE0 317 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 ZNF837Q96EG3 531 aaPredicted RBP7.56□□□□□ -1.2
LIG4-204ENST00000611712 Q96M66 194 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 POLDIP2Q9Y2S7 368 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 NKX2-6A6NCS4 301 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 G3V3Q6 166 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 HKR1P10072 659 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 DAOP14920 347 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 CA6P23280 308 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 GABRA2P47869 451 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 NPBWR1P48145 328 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 SELENOVP59797 346 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 KIAA0141Q14154 515 aaPredicted RBP7.56□□□□□ -1.2
LIG4-204ENST00000611712 ASPHD2Q6ICH7 369 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 RTN4RL2Q86UN3 420 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 POC1AQ8NBT0 407 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 NTNG2Q96CW9 530 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 ZPBPQ9BS86 351 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 RTBDNQ9BSG5 229 aaPredicted RBP7.56□□□□□ -1.2
LIG4-204ENST00000611712 REG4Q9BYZ8 158 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 SLC7A10Q9NS82 523 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 FBLN5Q9UBX5 448 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 OSGIN2Q9Y236 505 aa7.56□□□□□ -1.2
LIG4-204ENST00000611712 A0A0A6YYD4 124 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 ARGFXA6NJG6 315 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 TERTO14746 1132 aaKnown RBP7.55□□□□□ -1.2
LIG4-204ENST00000611712 GPR37O15354 613 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 TIMM8AO60220 97 aaPredicted RBP7.55□□□□□ -1.2
LIG4-204ENST00000611712 CTRB1P17538 263 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 BCL3P20749 454 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 LPAR6P43657 344 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 SULT1A2P50226 295 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 NHLH2Q02577 135 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 KCNMB1Q16558 191 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 CTRB2Q6GPI1 263 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 TMEM211Q6ICI0 200 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 LDLRAD3Q86YD5 345 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 ZNF808Q8N4W9 903 aaPredicted RBP7.55□□□□□ -1.2
LIG4-204ENST00000611712 ZNF561Q8N587 486 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 SLC35G3Q8N808 338 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 TMEM178AQ8NBL3 297 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 OR8U1Q8NH10 309 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 ISOC2Q96AB3 205 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 NIT2Q9NQR4 276 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 PARP11Q9NR21 331 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 UFSP2Q9NUQ7 469 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 BPTFQ12830 3046 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 DEDDO75618 318 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 HLA-GP17693 338 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 PTAFRP25105 342 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 P2RY1P47900 373 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 NDUFA6P56556 154 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 RBM11P57052 281 aaKnown RBP7.55□□□□□ -1.2
LIG4-204ENST00000611712 SNRPEP62304 92 aaKnown RBP7.55□□□□□ -1.2
LIG4-204ENST00000611712 PHYHD1Q5SRE7 291 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 FAM58AQ8N1B3 248 aa7.55□□□□□ -1.2
LIG4-204ENST00000611712 GAPTQ8N292 157 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms